G3124


Basic Information

Item Value
gene id G3124
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4966988 ~ 4967270 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU3484
TTCAAGCAACCATGCCTGGAAAGAGCAGGGAGCGCAGCGATACATTTCCCCCAAAACAAACCATCCCCCAACCGTAATAAATGATAAAGGTAAATGAGCAGCCTTAAGTGAGCGCGATTAATACGGACGGCTGCAAATTGTGCATAGCATCCTAAGCGAGCCAGCCGGAAGTGGTATTATTCTTGCAACAAGCATGTTGCCAATTGAGTATCGTGCACCTTGGCAGCAAGCACGCTGCCAAAACACAAATCTGCAACAAGTAACAAGCATGTTACTGAGCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3484 True 283 lncRNA 0.36 1 4966988 4967270

Neighbor

gene id symbol gene type direction distance location
CI01000000_04698746_04717749 RAPGEF2 coding upstream 248080 4698041 ~ 4718908 (+)
CI01000000_04661351_04667059 NA coding upstream 299901 4661351 ~ 4667087 (+)
CI01000000_04576065_04586515 ETFDH coding upstream 380107 4576065 ~ 4586881 (+)
CI01000000_04547587_04562715 RXFP1 coding upstream 404151 4547587 ~ 4562837 (+)
CI01000000_04462428_04462831 NA coding upstream 503876 4462428 ~ 4463112 (+)
CI01000000_05008086_05008382 NA coding downstream 40733 5008003 ~ 5008641 (+)
CI01000000_05030001_05137032 FSTL5 coding downstream 62731 5030001 ~ 5137032 (+)
CI01000000_05173896_05177992 QDPRA coding downstream 206626 5173896 ~ 5178085 (+)
CI01000000_05204803_05264985 LDB2, LDB2A coding downstream 237533 5204803 ~ 5264985 (+)
CI01000000_05267332_05282842 TAPT1 coding downstream 300062 5267332 ~ 5283179 (+)
G3115 NA non-coding upstream 5315 4961442 ~ 4961673 (+)
G3081 NA non-coding upstream 49487 4917139 ~ 4917501 (+)
G3041 NA non-coding upstream 118346 4846673 ~ 4848642 (+)
G2858 NA non-coding upstream 225220 4741376 ~ 4741768 (+)
G2827 NA non-coding upstream 239665 4726988 ~ 4727323 (+)
G3125 NA non-coding downstream 292 4967562 ~ 4967841 (+)
G3130 NA non-coding downstream 6065 4973335 ~ 4973707 (+)
G3135 NA non-coding downstream 12646 4979916 ~ 4980126 (+)
G3205 NA non-coding downstream 123993 5091263 ~ 5109602 (+)
G3214 NA non-coding downstream 179474 5146744 ~ 5147234 (+)
G2850 NA other upstream 240506 4725986 ~ 4726482 (+)
G2774 NA other upstream 512756 4453778 ~ 4454232 (+)
G579 NA other upstream 3058180 1767917 ~ 1908808 (+)
G435 NA other upstream 3534134 1425121 ~ 1432854 (+)
G350 NA other upstream 4290051 671842 ~ 676937 (+)
G6811 NA other downstream 5237561 10204831 ~ 10321679 (+)
G6820 NA other downstream 5459953 10427223 ~ 10433018 (+)
G7018 NA other downstream 6011219 10978489 ~ 10980872 (+)
G7153 NA other downstream 6277187 11244457 ~ 11245633 (+)
G7514 NA other downstream 7169252 12136522 ~ 12137008 (+)

Expression


Co-expression Network