G2858


Basic Information

Item Value
gene id G2858
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4741376 ~ 4741768 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU3191
GTTAGTATCTCACAGAAGTGAGTACACCCCTCACATTTTTGTAAATATTTTATTATATCTTTTCATGTGACAACACTGAAGAAATGACACTTTGCTACAATGTAAAGTAGTGAGTGTACAGCTTGTATAACTGTAAATTTGCCGTCCCCTCAAAATAACTCAACACATAGCCATTAATGTCTAAACCGCTGGCCACAAAAGTGAGTACACCCCTAAGTGAAAATGTCCAAATTGGGCCCAATTAGCCATTTTCTCTCCCCGGTGTCATGTGACTCATTAGTGTTACAAGGTCTCAGGTGTGAATGGGGAGCAGGTGTGTTAAATTTGGTGTTACCGCTCTCACTCTCTCATACTGGTCACTGGAAGTTCAACATGGCACCTCATGGCAAAGAA

Function

NR:

description
PREDICTED: B-cell lymphoma 6 protein homolog, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3191 True 393 lncRNA 0.36 1 4741376 4741768

Neighbor

gene id symbol gene type direction distance location
CI01000000_04698746_04717749 RAPGEF2 coding upstream 22468 4698041 ~ 4718908 (+)
CI01000000_04661351_04667059 NA coding upstream 74289 4661351 ~ 4667087 (+)
CI01000000_04576065_04586515 ETFDH coding upstream 154495 4576065 ~ 4586881 (+)
CI01000000_04547587_04562715 RXFP1 coding upstream 178539 4547587 ~ 4562837 (+)
CI01000000_04462428_04462831 NA coding upstream 278264 4462428 ~ 4463112 (+)
CI01000000_05008086_05008382 NA coding downstream 266235 5008003 ~ 5008641 (+)
CI01000000_05030001_05137032 FSTL5 coding downstream 288233 5030001 ~ 5137032 (+)
CI01000000_05173896_05177992 QDPRA coding downstream 432128 5173896 ~ 5178085 (+)
CI01000000_05204803_05264985 LDB2, LDB2A coding downstream 463035 5204803 ~ 5264985 (+)
CI01000000_05267332_05282842 TAPT1 coding downstream 525564 5267332 ~ 5283179 (+)
G2827 NA non-coding upstream 14053 4726988 ~ 4727323 (+)
G2850 NA non-coding upstream 15009 4725986 ~ 4726482 (+)
G2847 NA non-coding upstream 169782 4571357 ~ 4571594 (+)
G2845 NA non-coding upstream 171439 4569731 ~ 4569937 (+)
G2795 NA non-coding upstream 256561 4484583 ~ 4484815 (+)
G3041 NA non-coding downstream 104905 4846673 ~ 4848642 (+)
G3081 NA non-coding downstream 175371 4917139 ~ 4917501 (+)
G3115 NA non-coding downstream 219674 4961442 ~ 4961673 (+)
G3124 NA non-coding downstream 225220 4966988 ~ 4967270 (+)
G3125 NA non-coding downstream 225794 4967562 ~ 4967841 (+)
G2774 NA other upstream 287144 4453778 ~ 4454232 (+)
G579 NA other upstream 2832568 1767917 ~ 1908808 (+)
G435 NA other upstream 3308522 1425121 ~ 1432854 (+)
G350 NA other upstream 4064439 671842 ~ 676937 (+)
G6811 NA other downstream 5463063 10204831 ~ 10321679 (+)
G6820 NA other downstream 5685455 10427223 ~ 10433018 (+)
G7018 NA other downstream 6236721 10978489 ~ 10980872 (+)
G7153 NA other downstream 6502689 11244457 ~ 11245633 (+)
G7514 NA other downstream 7394754 12136522 ~ 12137008 (+)

Expression


Co-expression Network