G3697


Basic Information

Item Value
gene id G3697
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15842355 ~ 15842810 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5281
GTAACccgattttgtatttgatttaagtctttttgttttcttttgtttgtaccCCTGTGGTGCGGCGtggctttaatgtattgtttgttatactttgaggttgatgttgttgtaattttgtattttactttgtttttgcttcattgCAGGAGCTGGGGTCCCACGGGTGGTTGGATTTCTCTCCTGGTGGTGGTTCTTGGTATGCTGTGTAACACTGAGTGTTTAGTAGtgtgatctgagtgcacaggtgtgtgtgtggaagtgtgccATCGTAAAAACCGAACTCCTCTTGCCACTGGAAGCCTCAGCCCTGCTGGATGTATGTGATTTTGTTCTAGGGCCTCAACCTTAGATTAATTCTGTATtcatattcttttgttttgaagcggtgctttttctttttgcccccgtattttaaagtttatgtattaataaactttatacttttatatgcta

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function
GO:0019001 guanyl nucleotide binding molecular_function
GO:0001882 nucleoside binding molecular_function
GO:0001883 purine nucleoside binding molecular_function
GO:0032549 ribonucleoside binding molecular_function
GO:0032550 purine ribonucleoside binding molecular_function
GO:0032561 guanyl ribonucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5281 True 456 lncRNA 0.46 1 15842355 15842810

Neighbor

gene id symbol gene type direction distance location
snapc3 snapc3 coding downstream 132509 15701109 ~ 15709846 (-)
sugt1 sugt1,sgut1 coding downstream 192046 15632065 ~ 15650309 (-)
dnajb14 dnajb14 coding downstream 215945 15585579 ~ 15626410 (-)
pspc1 pspc1 coding downstream 260814 15527154 ~ 15581541 (-)
cntln cntln,LOC107595061 coding downstream 663909 15097021 ~ 15178446 (-)
spp2 spp2,LOC107654271,LOC107707843,LOC107588827,LOC107719734,LOC107556720 coding upstream 223917 16066727 ~ 16069295 (-)
c1h3orf70 si:dkey-22o12.2,LOC107588819,LOC107732704,LOC107704345,LOC107699091,LOC107719729,LOC107556711,LOC108435969 coding upstream 466199 16309009 ~ 16321592 (-)
ubac2 ubac2,LOC107704341,LOC107732706,LOC107573193 coding upstream 528678 16371488 ~ 16387107 (-)
dachc dachc,dach1,LOC107732708,LOC107602747,LOC107719724,LOC107699095,LOC108435962 coding upstream 550727 16393537 ~ 16435858 (-)
dis3 dis3,LOC107699072 coding upstream 610953 16453763 ~ 16464140 (-)
G3681 NA non-coding downstream 142393 15699710 ~ 15699962 (-)
G3679 NA non-coding downstream 143344 15698487 ~ 15699011 (-)
G3678 NA non-coding downstream 144050 15696585 ~ 15698305 (-)
G3677 LOC106572279,LOC106561082 non-coding downstream 146439 15694798 ~ 15695916 (-)
G3659 NA non-coding downstream 188204 15653938 ~ 15654151 (-)
G3735 NA non-coding upstream 173952 16016762 ~ 16017159 (-)
G3737 NA non-coding upstream 203633 16046443 ~ 16104201 (-)
G3739 NA non-coding upstream 232496 16075306 ~ 16078797 (-)
G3758 NA non-coding upstream 265516 16108326 ~ 16108610 (-)
G3760 NA non-coding upstream 268328 16111138 ~ 16111548 (-)
G3571 NA other downstream 611469 15230539 ~ 15230886 (-)
G3515 coro2a other downstream 812735 15020642 ~ 15029620 (-)
G3522 NA other downstream 916992 14925085 ~ 14925363 (-)
cxxc4 cxxc4,LOC107695705 other downstream 923569 14898201 ~ 14918786 (-)
G3491 gpank1 other downstream 1093380 14746829 ~ 14748975 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 226367 16069177 ~ 16073920 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other upstream 316882 16159692 ~ 16198263 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other upstream 491392 16334202 ~ 16359025 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 604278 16447088 ~ 16448519 (-)
LOC122330431 lsm6 other upstream 1591907 17434717 ~ 17436707 (-)

Expression


Co-expression Network