LOC122345237


Basic Information

Item Value
gene id LOC122345237
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20217197 ~ 20218643 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239183.1
CTCACAATCATATTCCACTTCTTTCACAGATCAAATTAGGATCGATTAGTGTTCTGTTGATGACTCTCCTTTTTGGGAGTGGAAACTTCTTAACAATGGAGAGAgGGTTCTTTGCAGACCGTGCAAATGTCACTGAGTATTGTGCTATGCCTCAAAAGTGCAATATTTATGGCTTCAGTGACTGGTACAAAGTGGGCAAGGTCTGTGTCAAATACTTCAACAGGCCTCGCAACTTCACTGACGCTGAGTTTGATTGTAGAGCCAGAGCCCCTGGTGCACACCTGGTGTCGGTGCATAGTAAACAGAATAATGATTACTTGCTCTGCATTGTGAAAAAATTCCAACCAAACAAACTGCGCATCTGGCTTGGagcttttgaactttttaagTCTGGTCAGTTTCTTTGGCTTGATGGATCCTTCTGGAATTATCAAATTTGGACACGCGGTGAACCCAACCATATGTACACTAGCACAGAGGAATGTGTGGAGATGAACTGGAAAGAGATTGGCAAATGGAATGACGCTTCTTGTAATGTCAAGAAAAGATACATATGTGCCTTCCGAGTAAACGACATCTTGAAACCAGGCTCTGAGAAGGAGGAGTAGTTTTATCTGGCTATTGTAAaactttctgaataaaatgattttctctGCATCAACAAAAAACccttacaataaaaatgaataaaatataaaataattctttaaaatctcaaaaaatctttaaaatgctaaataaaaaaatgt
>XM_043239191.1
ATTAGGATCGATTAGTGTTCTGTTGATGACTCTCCTTTTTGGGAGTGGAAACTTCTTAACAATGGAGAGAgACCGTGCAAATGTCACTGAGTATTGTGCTATGCCTCAAAAGTGCAATATTTATGGCTTCAGTGACTGGTACAAAGTGGGCAAGGTCTGTGTCAAATACTTCAACAGGCCTCGCAACTTCACTGACGCTGAGTTTGATTGTAGAGCCAGAGCCCCTGGTGCACACCTGGTGTCGGTGCATAGTAAACAGAATAATGATTACTTGCTCTGCATTGTGAAAAAATTCCAACCAAACAAACTGCGCATCTGGCTTGGagcttttgaactttttaagTCTGGTCAGTTTCTTTGGCTTGATGGATCCTTCTGGAATTATCAAATTTGGACACGCGGTGAACCCAACCATATGTACACTAGCACAGAGGAATGTGTGGAGATGAACTGGAAAGAGATTGGCAAATGGAATGACGCTTCTTGTAATGTCAAGAAAAGATACATATGTGCCTTCCGAGTAAACGACATCTTGAAACCAGGCTCTGAGAAGGAGGAGTAGTTTTATCTGGCTATTGTAAaactttctgaataaaatgattttctctGCATCAACAAAAAACccttacaataaaaatgaataaaatataaaataattctttaaaatctcaaaaaatctttaaaatgctaaataaaaaaatgt

Function

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239183.1 True 749 mRNA 0.38 5 20217197 20218643
XM_043239191.1 False 703 mRNA 0.38 5 20217197 20218609

Neighbor

gene id symbol gene type direction distance location
tmem187 tmem187,LOC107749980,LOC107679875,LOC107674198,LOC107746454 coding downstream 7504 20208263 ~ 20209693 (-)
ndufs8a ndufs8a,ndufs8,LOC107679876,LOC107746464,LOC107674223,LOC108434795,LOC106602580 coding downstream 17702 20196170 ~ 20199495 (-)
zgc:165520 zgc:165520,LOC107749989,LOC107679874,LOC107552638,LOC107746898,LOC107674222,LOC108262789,LOC108434798 coding downstream 21874 20191881 ~ 20195323 (-)
kdm2aa LOC107551394,LOC107674221,LOC107746404 coding downstream 26900 20173861 ~ 20190297 (-)
wu:fc21g02 LOC107749811,LOC107679888,LOC107714230 coding downstream 63314 20148541 ~ 20153883 (-)
p2rx3b p2rx3b,p2rx3,LOC107746906,LOC107674197,LOC107664541 coding upstream 5057 20223700 ~ 20228347 (-)
ssrp1b ssrp1,ssrp1b,LOC107746478,LOC107664573,LOC107674244 coding upstream 11947 20230590 ~ 20241854 (-)
med19b med19b,med19,LOC107551486,LOC107730510,LOC103047628,LOC108412480 coding upstream 62645 20281288 ~ 20283889 (-)
rtn4rl2a rtn4rl2a,rtn4rl2,LOC107746539,LOC107674267,LOC107556816,LOC107551512 coding upstream 108468 20327111 ~ 20331588 (-)
crybb1l2 crybb1l2,LOC107551523,LOC107674249,LOC107730514,LOC107556820,LOC107746545,LOC107664576 coding upstream 126312 20344955 ~ 20348750 (-)
LOC122345298 NA non-coding downstream 59674 20155664 ~ 20157523 (-)
G4713 NA non-coding downstream 278796 19938019 ~ 19938401 (-)
G4671 NA non-coding downstream 280438 19936390 ~ 19936759 (-)
G4615 NA non-coding downstream 584944 19631098 ~ 19632253 (-)
G4611 NA non-coding downstream 605682 19608383 ~ 19611515 (-)
LOC122345304 NA non-coding upstream 46642 20265285 ~ 20266183 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding upstream 224309 20442952 ~ 20444794 (-)
G4930 NA non-coding upstream 240898 20459541 ~ 20460184 (-)
G4934 NA non-coding upstream 247519 20466162 ~ 20469015 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding upstream 395273 20613916 ~ 20702298 (-)
si:dkey-9i23.16 NA other downstream 76618 20137035 ~ 20140579 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 678051 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2336780 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 2452465 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2780490 17434717 ~ 17436707 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 70674 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 148486 20367129 ~ 20369111 (-)
G4958 NA other upstream 465199 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 687527 20906170 ~ 21410571 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1330974 21549617 ~ 21564077 (-)

Expression


Co-expression Network