trnae-cuc_3


Basic Information

Item Value
gene id trnae-cuc_3
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20096955 ~ 20097026 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_102
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGcggcccgggttcgattcccggtcaGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_102 True 72 tRNA 0.62 1 20096955 20097026

Neighbor

gene id symbol gene type direction distance location
htt htt,LOC107679870,LOC107551186,LOC107674220 coding downstream 32800 20033982 ~ 20064155 (-)
rgs12b rgs12b,LOC107749922,LOC107556525,LOC107714241,LOC107679871,LOC107674230,LOC107551217 coding downstream 64936 19995190 ~ 20032019 (-)
dok7b dok7,LOC107749932,LOC107679881,LOC107674231,LOC107714234 coding downstream 111991 19966867 ~ 19984964 (-)
adra2c adra2c,LOC107552592,LOC107671617,LOC107712015,LOC107752971,LOC107556512,LOC107674202 coding downstream 180623 19911680 ~ 19916332 (-)
hmx1 LOC107671606,LOC107712016,LOC107556513,LOC107674270,LOC107552587,LOC107752954 coding downstream 214231 19881125 ~ 19882724 (-)
trnam-cau NA coding upstream 15724 20112750 ~ 20112821 (-)
trnae-cuc_4 NA coding upstream 16116 20113142 ~ 20113213 (-)
tmem132a LOC107679886,LOC107749857,LOC107551241,LOC107556516,LOC107674183,LOC107552170 coding upstream 16278 20113304 ~ 20120444 (-)
LOC122345161 NA coding upstream 26364 20123390 ~ 20128684 (-)
vps37c vps37c,LOC107749845,LOC107679880,LOC107551318,LOC107714235,LOC107556517 coding upstream 33139 20130165 ~ 20136551 (-)
G4713 NA non-coding downstream 158554 19938019 ~ 19938401 (-)
G4671 NA non-coding downstream 160196 19936390 ~ 19936759 (-)
G4609 zgc:194443,LOC107559638,LOC107737093,LOC107559639,LOC107674248,LOC107552058,LOC107551053,LOC107551042 non-coding downstream 287324 19598210 ~ 19809631 (-)
LOC122345298 NA non-coding upstream 58638 20155664 ~ 20157523 (-)
G4870 NA non-coding upstream 102969 20199995 ~ 20265069 (-)
LOC122345304 NA non-coding upstream 168259 20265285 ~ 20266183 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding upstream 345926 20442952 ~ 20444794 (-)
G4930 NA non-coding upstream 362515 20459541 ~ 20460184 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 557809 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2216538 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 2332223 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2660248 17434717 ~ 17436707 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 3648436 16447088 ~ 16448519 (-)
si:dkey-9i23.16 NA other upstream 40009 20137035 ~ 20140579 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 192291 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 270103 20367129 ~ 20369111 (-)
G4958 NA other upstream 586816 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 809144 20906170 ~ 21410571 (-)

Expression


Co-expression Network