G80473


Basic Information

Item Value
gene id G80473
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 9699451 ~ 9725103 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119027
tgtaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacacttatatgtgtgtgtgtgtgtgtgtgctttctcAAAAAATATCTATTACAAAAGACACACTTTTACATAGatgcttaaaatataaatagtatttacaAGATTTCCTGATTTCCGTTATATACACGATCACTTCCTCATTAAACTTTCTTTTTACATCACCTTGAAAGAAGTTTCTAAACCCTTCTAAACCCTTCACTACGTAAACAGAACTAAAAGCACAAACTCTGGCTGATCATTACAGACTACTGGCACTCTTTCAGAGTTTCTGGACATCGTTTGGTTTCGTCGGCACAGACAAACAAGTCTGACGTTTCTAATCTGAATCCTCGCTGCTGCACGAATTGTACGAGCTGTCGTAACACTCGGCCATGTAGGGAAACTTATGGACGTTTGGGTTGAGTTTGGGCACCCAGGCACGAGGTACCAGGAATGTCGCGAGGTTGAACAAATCCACGAACACTTTGTA

Function

GO:

id name namespace
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901606 alpha-amino acid catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0042594 response to starvation biological_process
GO:0031667 response to nutrient levels biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process
GO:0009991 response to extracellular stimulus biological_process
GO:0016054 organic acid catabolic process biological_process
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119027 True 534 lncRNA 0.35 2 9699451 9725103

Neighbor

gene id symbol gene type direction distance location
fam43a fam43a,LOC107715807,LOC107574059,LOC107677513,LOC107685960,LOC107718209,LOC107551800 coding downstream 55734 9641549 ~ 9643717 (-)
zmat3 zmat3,LOC107715805,LOC107685963,LOC107718246,LOC107677493,LOC107581711 coding downstream 177690 9508358 ~ 9521761 (-)
si:dkey-202e22.2 si:dkey-202e22.2,LOC107715802,LOC107574832,LOC107677483,LOC107718205,LOC107686004,LOC107551796 coding downstream 266475 9426276 ~ 9432976 (-)
slc38a3a slc38a3,LOC107715801,LOC107685967,LOC107718202,LOC107551777,LOC105909818,LOC107677487 coding downstream 291357 9370377 ~ 9408094 (-)
gnai2a gnai2a,gnai2,LOC107551795,LOC107685968,LOC107677503,LOC107723915,LOC105909893,LOC106517997 coding downstream 331563 9317024 ~ 9367888 (-)
spoplb spoplb,LOC107551807,LOC108412981,LOC107685952,LOC103032629,LOC108270802,LOC107718234,LOC105911847,LOC107573035 coding upstream 66940 9792043 ~ 9801222 (-)
nkpd1 LOC107686002,LOC107556520,LOC107718248 coding upstream 296858 10021961 ~ 10027236 (-)
trnaq-cug_19 NA coding upstream 534092 10259195 ~ 10259266 (-)
LOC122354381 megf11,LOC107596974,LOC107686294,LOC107672222,LOC107583869 coding upstream 541656 10266759 ~ 10305672 (-)
LOC122354188 bhlhe40,LOC107577974,LOC107715793,LOC107659534,LOC107685973,LOC107718198,LOC107573081 coding upstream 593188 10318291 ~ 10322035 (-)
G80472 NA non-coding downstream 3498 9695715 ~ 9695953 (-)
G80448 NA non-coding downstream 68582 9627729 ~ 9630869 (-)
G80426 NA non-coding downstream 112285 9586889 ~ 9587166 (-)
G80412 pik3ca,LOC107685965,LOC107551780,LOC107574159 non-coding downstream 159332 9535597 ~ 9540119 (-)
G80411 NA non-coding downstream 165687 9532567 ~ 9533764 (-)
G80568 NA non-coding upstream 152754 9877857 ~ 9879199 (-)
G80572 NA non-coding upstream 360211 10085314 ~ 10091755 (-)
G80578 NA non-coding upstream 462454 10187557 ~ 10188693 (-)
G80596 itpr1,LOC107581741,LOC107659525,LOC107685975 non-coding upstream 710999 10436102 ~ 10451440 (-)
LOC122354526 NA non-coding upstream 769554 10494657 ~ 10497979 (-)
LOC122353984 NA other downstream 998694 8696450 ~ 8700757 (-)
LOC122353980 NA other downstream 1031651 8553416 ~ 8667800 (-)
LOC122354573 NA other downstream 1160907 8532773 ~ 8538544 (-)
LOC122354572 NA other downstream 1179431 8508659 ~ 8520020 (-)
LOC122353694 NA other downstream 1202166 8491771 ~ 8497285 (-)
thsd7bb NA other upstream 88519 9813622 ~ 9866553 (-)
cntnap5l cntnap5l,LOC107687751,LOC107581667,LOC107685949,LOC107715775,LOC107718238,LOC107572029 other upstream 170613 9895716 ~ 9961124 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other upstream 520499 10245602 ~ 10254848 (-)
LOC122354283 mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807 other upstream 1026094 10751197 ~ 10758842 (-)
LOC122353594 rfc4 other upstream 1037388 10762491 ~ 10765837 (-)

Expression


Co-expression Network