si:dkey-202e22.2 (si:dkey-202e22.2,LOC107715802,LOC107574832,LOC107677483,LOC107718205,LOC107686004,LOC107551796)


Basic Information

Item Value
gene id si:dkey-202e22.2
gene name si:dkey-202e22.2,LOC107715802,LOC107574832,LOC107677483,LOC107718205,LOC107686004,LOC107551796
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 9426276 ~ 9432976 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251566.1
CCGCGTGCCGTTTGGACAGGTGCATCCCAGATCACCACCATCAGCAGAAAAGTTTTTTCATTGACCCGCTCTGAAAAATGGATTACCAGCAGCTGGATTTCGTGCGGCTTGCCAAGAAAACAGTGTTTCCAAACAGACAGTGAAGGAGATCTCTCCGAACTTAACTGAATATGCACTGGGACATGACGGTTTATCTGCTCTAACTATGGATAACTAGCCTTTACGTCCAGACCGCTAAACATGAAACCTCTTTGGAGCCCTCAgcttgtgatgatgatgatactgAAGTGCGCAGTCATCTTATTTCCAGGATTCCTGCAGGACTTCACAGAGTCCAGATGTGTTGGCCGTGCTTGCAGCCCTCCTATGGGTAACTTGGCCAGTGGCAGGACCCTTTTCACGCTGACTAGCTGCTGCACTAATAGCTCTTCCTGCCTGCCAGCCCAGCCACGCTGTCTAGCAGAGCTCCATCCTCCTGCCCTCATGACCGATGACCCGTTTATCCATCCAGATACCTGGTGGGGCTCAGCAGCGGCCACTGGAGAACAGGAAGAAATCCGTCTTAACTTGGAGACACGGTTCTGCATGAGTCACGTTGTGATGTTATTCCGTTCCCCGCGTCCTGCTGCTATGAGGTTGGAGCGCTCGCAGGACTTTGGCCAGACCTGGGAGACACTAAAGCTGTTTGCCAGGAACTGCACTGAGATGTTCGGGCTTCCTGATGATGTAAGTCAACCGGGATCTCTCTGCACTTCCAGATATTCTAATGCGGTCCCGTGCAGCCGAGGAGAGATCATATTCCGGTCCATAGGATTGGGAAGCGGGATCGTTGATCCCTACAGTCCTGAGGCACTGTCTCGTCTGACAGTGACTAACCTACGAATCCAGCTCTTGAAATCTCAACAGTGTCCCATCTCAAAGGTTCAGCGAAGTGTCCCAGAACAGTCAAACCCACCCtttttacccacaatgcacAGCAAGCCACCGACTGCTCCAACACCGAGTTCCGATCCTCTGGATTCAACCCCATTTGCTGTGTACTCTCTTCTGGCTAAAGGGACGTGTTTGTGTCATGGCCATGCCGAACATTGCCTTCCTGAAAATGAAGGACGTGACAGCCTGCAACGCAGTAATGTGGTGTCAGGCAAATGCGTGTGTACCCACCACACAGCGGGCGAACACTGCGAGAGGTGCGCCTCGCTCTACAACGACCGGCCCTGGAGAGCAGCCAACGGAAGCAGCGGGGAGAGCAACCCCTGCCAGAAGTGTGAATGTCACGGCCACGCAGAGAGCTGCCACTTCTCCCCGCGAGCGTGGCTCTCCACAGGGGGCGGTAGCGGGGGCGTCTGCGACAACTGCCAGCATAACACTGTGGGCCGCCGGTGCCAGCGCTGTCGCCCTGGATACCACCGTCACCCTGCCAGACCCCTCAACTCCCCGCATGCTTGCACACGATGCTGGTGTGACCCAGTTGGGTCGATGCCAGTACATTCCAGCAGCGGGACACCATGGTGCCATCCTAGAAGTGGACAGTGCCACTGTAAACCTGGAGTGGGAGGCACCACCTGCAGCCATTGTCTACCAGGGTACTGGGGCTTTGGAGAGGAGGGCTGCAAATCTTGCGTCTGCCCTTTGACCTGCGATCCCGTCACAGGTCATTGCTTAGACAgCAAAGGTGGTGTCAAGCTTTACAATGTACCAATTGGTGGGAAAATTCCTGAACTGTCTCACTTTAAACCTCAAGAGGATGAGAGGGTGTGGCCTAAAGAACTGGCCGTCTCTGCGCTGTATTACACAGggAAGTGCAGCTGTAAGGAAAAGAGACTCAAAAGTGTGTCAGATCTTTGCAAGATGAAACACGCATACGTGATCAAAGCCAGCGTGCTGTCAGCTCACGATAAAGGCACACACGCAGTTGTGCTGGTAAAGGTGAGGAAAGTGTTTCGTTCTGGAAAACTGCCCCTCTCCCAGGGAACACACAGTCTCTACCCGCTCTCCTGGACCAGCCGTGGCTGCACCTGTCCCATCCTCAACCCAGGTGGGAATTATCTACTGGCAGGTCCTGAAGATGTTGATTCTGGACGGCTACTGGTCACCTTGCAGAGTCTAGTAGTCAGCTGGACCCCCATCCTGGGCTTTCAGGTCACAGAAGCGCTGCATCAGGGCTGCTTATGAGCGCAGCTTCACCCAAATGTACAGCAGCACAAACTTGAAACAATGCCATTGTACCAAAGCAGGCAGCCGGATCCTAAATGGACTATGACTGCCGGATGCAACTGAAGTGGAACGTGGGTAATTATTAGCAGGCACAAGATTCATCGAGAAGCTGCATGGCAACGTGCACTGAATAGCCACTTTAAGTAACTGTATAATTGTCATACGGCACAACTCGAGCAAGGCTCATGTAACTCTTCATCTTGGTGGCTGTTGCC

Function

symbol description
si:dkey-202e22.2 Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Orthologous to human NTN4 (netrin 4).

NR:

description
PREDICTED: netrin-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251566.1 True 2432 mRNA 0.53 10 9426276 9432976

Neighbor

gene id symbol gene type direction distance location
slc38a3a slc38a3,LOC107715801,LOC107685967,LOC107718202,LOC107551777,LOC105909818,LOC107677487 coding downstream 18182 9370377 ~ 9408094 (-)
gnai2a gnai2a,gnai2,LOC107551795,LOC107685968,LOC107677503,LOC107723915,LOC105909893,LOC106517997 coding downstream 58388 9317024 ~ 9367888 (-)
inka1a LOC107677492,LOC107715799,LOC107686008,LOC107718245,LOC107578626,LOC107551787,LOC107582130 coding downstream 116691 9306658 ~ 9309585 (-)
mon1a mon1a,LOC107575025,LOC107677505,LOC107685969,LOC107551794 coding downstream 164475 9256259 ~ 9261801 (-)
mst1rb mst1rb,mst1r,LOC107551784,LOC107686010,LOC107677494 coding downstream 176116 9233740 ~ 9250160 (-)
zmat3 zmat3,LOC107715805,LOC107685963,LOC107718246,LOC107677493,LOC107581711 coding upstream 75382 9508358 ~ 9521761 (-)
fam43a fam43a,LOC107715807,LOC107574059,LOC107677513,LOC107685960,LOC107718209,LOC107551800 coding upstream 208573 9641549 ~ 9643717 (-)
spoplb spoplb,LOC107551807,LOC108412981,LOC107685952,LOC103032629,LOC108270802,LOC107718234,LOC105911847,LOC107573035 coding upstream 359067 9792043 ~ 9801222 (-)
nkpd1 LOC107686002,LOC107556520,LOC107718248 coding upstream 588985 10021961 ~ 10027236 (-)
trnaq-cug_19 NA coding upstream 826219 10259195 ~ 10259266 (-)
G80328 NA non-coding downstream 54 9424948 ~ 9426222 (-)
G80253 NA non-coding downstream 283051 9142968 ~ 9143225 (-)
G80249 NA non-coding downstream 284363 9139787 ~ 9141913 (-)
G80222 NA non-coding downstream 432269 8987625 ~ 8994007 (-)
G80218 NA non-coding downstream 510306 8914473 ~ 8915970 (-)
G80400 NA non-coding upstream 64472 9497448 ~ 9498033 (-)
G80405 pik3ca,LOC107551780,LOC104933269,LOC100704479,LOC101066166 non-coding upstream 91075 9524051 ~ 9524424 (-)
G80406 NA non-coding upstream 92092 9525068 ~ 9525278 (-)
G80407 pik3ca,LOC107551780,LOC107685965,LOC107574159 non-coding upstream 93166 9526142 ~ 9526472 (-)
G80408 pik3ca,LOC107685965,LOC107574159,LOC107551780 non-coding upstream 93846 9526822 ~ 9527237 (-)
LOC122353984 NA other downstream 725519 8696450 ~ 8700757 (-)
LOC122353980 NA other downstream 758476 8553416 ~ 8667800 (-)
LOC122354573 NA other downstream 887732 8532773 ~ 8538544 (-)
LOC122354572 NA other downstream 906256 8508659 ~ 8520020 (-)
LOC122353694 NA other downstream 928991 8491771 ~ 8497285 (-)
thsd7bb NA other upstream 380646 9813622 ~ 9866553 (-)
cntnap5l cntnap5l,LOC107687751,LOC107581667,LOC107685949,LOC107715775,LOC107718238,LOC107572029 other upstream 462740 9895716 ~ 9961124 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other upstream 812626 10245602 ~ 10254848 (-)
LOC122354283 mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807 other upstream 1318221 10751197 ~ 10758842 (-)
LOC122353594 rfc4 other upstream 1329515 10762491 ~ 10765837 (-)

Expression


Co-expression Network