G80412 (pik3ca,LOC107685965,LOC107551780,LOC107574159)


Basic Information

Item Value
gene id G80412
gene name pik3ca,LOC107685965,LOC107551780,LOC107574159
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 9535597 ~ 9540119 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU118954
TTCTTGAAATACGTTTATTTGTACATAGTCACATAACACTCAAAATATTGAAGACAGACTGGATACAAAGCTACCTTTGAACTGAGGTGCACAATGAAATCGAATAGAAATGAATATGAGGCTTTGTAACTGATGGCAGTTTATAGATGGTTTGTGATGGGTGCAGTCATAGGCCAAAAATCctttacatctttaaaaaaacaaaacaaaacaaaacaaacaaacaaacaaaaaataaaacactaggGCAACTTCTtaaacttttctctttttttcctttttttttttaatttttttatctcatcTCATGCAAGGAAGTAAAAGAGGTAAATAAAGTATTTGGCCcgctatatataattttataataatgatagtAAAGAAAATTATATCTTTATGACATCATAATTCAACACATAAATGAGTAATATGCAACAGcaatacagagagagaaacataagcgttaaaaaaaaaaaactgctttgacCTTCCATTAAATAGAATTTTCTATATCCTCCATCTTTTAGACTTCACACAATAGCAAACAAATTTATACTTTAGTTTTCTTTCAATTTAAATGgtcatttttctctctttttattggTGTAGTAGAGTTTCTAACTGTAAAGAGACTCCATACCAAACCACTGAAACATTCACAATCGGTATGAAATTGCCTATGCAGGTAAACCTTCAGTGCTATGTAACATTGACGGCTTTGtagtctacacacacacacacacacacacaaaaacggTTCTGAGCGATGATTTTCAAGTACAACAACTGAAACTTATCAAACGTTTTCGTAGTTcaactcctttttttttttttttttctcattttcctttGTCATACAAAAGACTCCAGGATTTCTGCACCTCAATAGTTTGTTTGCaagtcattaaaatgattaaaaagtaaactGGAAAGCTACCGATTACATTAGACGTTTGTGAATGGGCTTTTTAGCGGGTCCAGCCCAAGCAGATCTGTAACCtgtacagacaaaaacacacgtGAACAGAACcatgcattaaaaatggctTCAAGAGAGCTAACATAAGGCTGCTTCGCCGTGACTAAGCTCTAACGCAGCTGATCTCAGTTTCAGGCAGTAAATGAGCACATGGGGTTAAAAACGCATGCGGGAGACTAAAGCGTCCCTCGGGACCGAAGGCaaagagagaataaaaataCGAAGGAATAAAAAGTGCAAGAACCACCTGCATACATCAGTCTGACACGTGTATCTCTGCTCATTCGTTTACTGCATATAAGAGTTGCAacgtttaccaaaaaaaaaaaaaaaaaaaaatgcataaatgtggaATACTACAATAGTACTCAGGACACCGTTTTGAACTTAaaaacagtagaaaaaaaaaacaaactcattcaTTATGATTTGCATTGTTAGATGTTGCCCAGTATTTGAGCTCCGCAAAGACCTTGTCAGACTGCGACACGGAAATGAGCGCGCGTCgtttccttgtgtttttccTATCTGGTTTTCATCCGATCCTTAACGTCTCGGGCGGTTACGCGAGTATGATCGCCGACTTTCCTTTTGAGGAAAACACAACGCACATAAAACGGGCGAGAAAAAAACGGGCACTCAGGAGTCAGTTCCTGCCAGTAGCCATATATCCATTTAAATAGCACGATTGCACCTCATtagtaaaatgtacattttcacagctttaaagtaatgcaaaaacacGTCAGGGGCTTGGATTAACCGACAGGGGCCGAGAAGGGATAGAAAGAGAACATCTGAATTTGTGCCCAATGAGGTAGTTCACCCTAAAAAGAAAATGGTCACCACTCATGTCGctccaaacattaaaaatgttctgaaaaatgtttttgttgttttttttttaaatacaagtcAGTTGGGTTATTCAAAAAATCTTCTTTAGCTGTTCAGCAGAagacaggtttgaaatgacggtgggcaaatgtttttttttgggtgaactatcccttttaataGGTGAAGATTTGGTAGGGAATCAACCTGCTGAGGTGATCCAGAAAGCTGGTAAACCAACAGGCGAAGCGAGCAGCTCGAACATAACACTGCCATTACAGCCACATGCAAGGCACTTAACCTGACTTAAAAGGGCGCAGAGttaattcatttgatcaaattaaaagATAACTAccctcattttctttttactctAATTTGCTCAGCCCTGTAACACCACATTTGAGACCTGTTGATCCTGCACCATGAAACATTCACTGTACTTTGTCTgcactaatgaaaaaaaaagagaagggggacagaatgtatgtgtgtgtgtgtgtgtgtgtatacatgcgcgcacacacacacacgcacacgcacgcacgcatgtatgcatataaatgtatCTGTAGATAGATATTATAAATGCACTGTACTGTAGTGTCATCGGTAAATGATATTTTACCAGTGTCATACATTTGAAGCCATTTCACCGTCTAAAACATCCATTTCGTCTATAGAATCTTTCAACGTTTAACTACATAGCACCATCTTTCTTAAAAGAAACagtccaccccaaaatgacccTTACGTCGTTCAAACCCTGCACGACTGACTTCCTTCATGCAAAAGAAGCCATTTCGCACGATGCTGATAATCAGTCAGCTTCGGTTTCCATTGACTTCCGatcttatttttttggaaattctatgaaaaaaatcaataaaaacctAAAGATTTTGGGTGGATTATCCCTTTAATGCTTCTCAAGCAATCTACGAGTtgtatctgtttaaaaaaaaaaaaaaaaaaaaagaagaagtcaGGCTAACAGGAAAGGTCTTGCCAGCTTTAGCAGTAAAATAAAGTACCCAGTGATACAGCGACTCAACTGAAAGGGAAGAAAAAGCCATTTTGTTCTTTCGTAACCGCTCAGCGCCAACGTGTTTGCTTTCCTGTGGCATGCAAGGGCACATGGAGAAGAATATCGATTCATACTATGCGAGTGTATTAAGGCTTCAAATCTGCACGCTGCCAGGGCATCCGGTAGTCACAATCATTACTCTGCACCAGACAACCGAGAAAACACAGAGAGCCGATAACCTGGATTCCTGTAATGTTTTGCACACTGGAACTGGAAAAACAGCATTGatctataaaaaagtaaaaatgaaaatatttgtcCCAATTAGTGATAAACTGAAACACATCGGCCAGGCCATTCATTTTTAACCCATCAGCTACAAactcaatataaaatattgtgtaaaataaggGAAATCAGTACTCATTTGCTTACTTATCGCCATCAGTACTGGCCATCAAAAATACCCATGTCGTAGtcctaaaaatgaatatttctttCTATCATGAAACCTACGCTGTTATTGTGTAATGCGTTACGTGCATATTGAGAACACAACCCATGTTGTTACCGATGTCTCTGAAAAGTCTGTTTGAGTTTGAGACTCATGTAGTGCTACTGTGAGGCCAAAATGTGAGttcataataatacaaaaaaaaaaagaagaaagaaaaatattcacGTCCAGTGCATAATAAGGTATTCAGGCTATCATTTTAGCTCGCTGTGCAtacaaggaagaaaaaaaaaagaacgaaacCTTATCATCCGTCTATTATAAACCAACTGAACTCAAAGGACAGGAGCGCAATTCAGAAATCAGCACCATCAGATTCATACTGCTACGCCTCGGGCTGCCTTTCGCGGGGTTAGTGTTGGTTTTGAGAGGAAAGGCCAGGTAGCAGACCAGAAAGTTTCATACCCTGTTTTTCTAGTGTTCTCAGAGGTTCCGTGCATATTAGAAGGCATTTGTAGTTTTAAACAGGAAGACATGAACATCCCCACAAAAGCTCCTGAAGAgtgcagaactttttttttttttcttcaatggtTTGTTTttcgcagaaaaaaaaaaattatatatatatatatatattaataataagaagaggAATTGACTCTCCAGGAAAAAGAGCAGCACAatgtggagagaaaaaaaaaattgggggaAAACTACAGCTAGAACATACAACCACTCCGGACAATGATGGTTAAGAGATGCCtcacatggggaaaaaaataaaaaataaacaagaggACACAAAAAGATGTCCTTCCGGGTTGTTTTAGTGCTCTGAAGGTCATTTGTACATGAGGTTTGGGTGCTGTGATTCTCCATGGCATAAATCAGGCAGTGCTTCCTACAAAAAGGGTCTTGTTTCTGCCTGTTATCCGGCCCCAAATTCCACCAGTGGGCTGGGATCTGTGTCGGCTCAGTTTTGGGCATGGTGTCGGATGGTGTGAAAGATCCAGTCCATCTTTGTGGTCCATCCGCCGTGGTGAGCGTCATTCATTTGCTTCATGAAATAGTCTAGGGCCTCCTGCTCAGTTTTGTCCAGCGCCAGGGTCTTTCGGATGTAAGCGATGTCATCAAAGGACTGCAGCTCTGGCATGCCTGAGCCCAGCATCATGGAGAAGAGGTTTATGAAAAGGTTGGCATGCTGTCTGATTGCCAAGTAAGCC

Function

symbol description
pik3ca Predicted to enable phosphatidylinositol-3,4-bisphosphate 5-kinase activity and phosphatidylinositol-4,5-bisphosphate 3-kinase activity. Acts upstream of or within regulation of collateral sprouting in absence of injury. Is expressed in eye and male organism. Human ortholog(s) of this gene implicated in several diseases, including CLOVES syndrome; Cowden syndrome; breast cancer (multiple); cutaneous Paget's disease; and gastrointestinal system cancer (multiple). Orthologous to human PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha).

NR:

description
PREDICTED: LOW QUALITY PROTEIN: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118954 True 4523 lncRNA 0.38 1 9535597 9540119

Neighbor

gene id symbol gene type direction distance location
zmat3 zmat3,LOC107715805,LOC107685963,LOC107718246,LOC107677493,LOC107581711 coding downstream 13836 9508358 ~ 9521761 (-)
si:dkey-202e22.2 si:dkey-202e22.2,LOC107715802,LOC107574832,LOC107677483,LOC107718205,LOC107686004,LOC107551796 coding downstream 102621 9426276 ~ 9432976 (-)
slc38a3a slc38a3,LOC107715801,LOC107685967,LOC107718202,LOC107551777,LOC105909818,LOC107677487 coding downstream 127503 9370377 ~ 9408094 (-)
gnai2a gnai2a,gnai2,LOC107551795,LOC107685968,LOC107677503,LOC107723915,LOC105909893,LOC106517997 coding downstream 167709 9317024 ~ 9367888 (-)
inka1a LOC107677492,LOC107715799,LOC107686008,LOC107718245,LOC107578626,LOC107551787,LOC107582130 coding downstream 226012 9306658 ~ 9309585 (-)
fam43a fam43a,LOC107715807,LOC107574059,LOC107677513,LOC107685960,LOC107718209,LOC107551800 coding upstream 101430 9641549 ~ 9643717 (-)
spoplb spoplb,LOC107551807,LOC108412981,LOC107685952,LOC103032629,LOC108270802,LOC107718234,LOC105911847,LOC107573035 coding upstream 251924 9792043 ~ 9801222 (-)
nkpd1 LOC107686002,LOC107556520,LOC107718248 coding upstream 481842 10021961 ~ 10027236 (-)
trnaq-cug_19 NA coding upstream 719076 10259195 ~ 10259266 (-)
LOC122354381 megf11,LOC107596974,LOC107686294,LOC107672222,LOC107583869 coding upstream 726640 10266759 ~ 10305672 (-)
G80411 NA non-coding downstream 1833 9532567 ~ 9533764 (-)
G80410 NA non-coding downstream 4836 9530356 ~ 9530761 (-)
G80409 NA non-coding downstream 5391 9529583 ~ 9530206 (-)
G80408 pik3ca,LOC107685965,LOC107574159,LOC107551780 non-coding downstream 8360 9526822 ~ 9527237 (-)
G80407 pik3ca,LOC107551780,LOC107685965,LOC107574159 non-coding downstream 9125 9526142 ~ 9526472 (-)
G80426 NA non-coding upstream 46770 9586889 ~ 9587166 (-)
G80448 NA non-coding upstream 87610 9627729 ~ 9630869 (-)
G80472 NA non-coding upstream 155596 9695715 ~ 9695953 (-)
G80473 NA non-coding upstream 159332 9699451 ~ 9725103 (-)
G80568 NA non-coding upstream 337738 9877857 ~ 9879199 (-)
LOC122353984 NA other downstream 834840 8696450 ~ 8700757 (-)
LOC122353980 NA other downstream 867797 8553416 ~ 8667800 (-)
LOC122354573 NA other downstream 997053 8532773 ~ 8538544 (-)
LOC122354572 NA other downstream 1015577 8508659 ~ 8520020 (-)
LOC122353694 NA other downstream 1038312 8491771 ~ 8497285 (-)
thsd7bb NA other upstream 273503 9813622 ~ 9866553 (-)
cntnap5l cntnap5l,LOC107687751,LOC107581667,LOC107685949,LOC107715775,LOC107718238,LOC107572029 other upstream 355597 9895716 ~ 9961124 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other upstream 705483 10245602 ~ 10254848 (-)
LOC122354283 mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807 other upstream 1211078 10751197 ~ 10758842 (-)
LOC122353594 rfc4 other upstream 1222372 10762491 ~ 10765837 (-)

Expression


Co-expression Network