LOC122358607 (pim3)


Basic Information

Item Value
gene id LOC122358607
gene name pim3
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10264468 ~ 10266680 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258489.1
AACAAGTatagaaaaataagaaataagaagtTCACCGCGGGTTTTCAATGCTCTGCGCTCTAGCGgctgcaaaacaaaatgtgtatgCCTTGTCATATTTACGGTTGCAGTAATCTTAGTCCTTGGTGTGTTGTTTTGACCTCATTATTGGACTGTGTTTGGAAGGACATAAACGTAAATGTCATTCTCACTTTTATAGTATGTCTTACACTGCGCCTTCTACAATTTGGATGCTTACGCCACATGTAGGAATCccgtctgcgttagacTACATCTTCAGCCGTTACACTGTGGGAGATCAGCTGGGCAAAGGTGGATTTGGGGTGGTGTATGAAGGAACGCGTCTGGAGGATAATATTAAAGTGGCTTTGAAATACGTCACAAAGACGGAGCAAATGGAATGTGTATTCCTTCCTGATCATGCAGAGCCTCTTCCAAAAGAGATCGCCCTCACCATCATGGCGAATAAAGGTCGAAGAGTGCCAGAGATCATCCGGCTGCTGGAGTGGAGGGACCACCCTGACCACTTCGTCATGGTCCTGGAACGTCCCTCTCCCTGTGAGAATCTGGTGGAGTTCCTCAGGCGTCACGGTGGAAGCCTGGACGAGGAGAAAGCGCGGCAGATCATGTGGCAGGCGACTAACGCCGCACACATGTGCTGCCTCCGAAAGGTGTTCCACCGTGACGTCAAACTGGAGAACCTTCTCATCAACAGGAGACATCCGAAGTCAGGCTGA

Function

symbol description
pim3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human PIM3 (Pim-3 proto-oncogene, serine/threonine kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase pim-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258489.1 True 737 mRNA 0.48 4 10264468 10266680

Neighbor

gene id symbol gene type direction distance location
LOC122358606 pim3 coding downstream 3301 10259235 ~ 10261167 (-)
LOC122358604 NA coding downstream 9899 10252592 ~ 10254569 (-)
itgae.2 LOC107701425,LOC107582635 coding downstream 36718 10215863 ~ 10227750 (-)
cul5a cul5,cul5a,LOC107714978,LOC107582587,LOC107554266,LOC107701426,LOC107659927 coding downstream 49864 10204705 ~ 10214604 (-)
trnastop-uca NA coding downstream 61055 10203327 ~ 10203413 (-)
LOC122358608 NA coding upstream 3321 10270001 ~ 10272083 (-)
LOC122358609 NA coding upstream 6209 10272889 ~ 10275968 (-)
LOC122358610 NA coding upstream 12592 10279272 ~ 10281448 (-)
tubd1 tubd1,LOC107728776,LOC107659941,LOC107579697,LOC107581164 coding upstream 71854 10338534 ~ 10342890 (-)
LOC122358984 LOC107713431,LOC107701403,LOC107728777,LOC107597591,LOC100002059,LOC107582660,LOC107659940 coding upstream 153574 10420254 ~ 10429603 (-)
G105362 NA non-coding downstream 12473 10245464 ~ 10251995 (-)
G105363 NA non-coding downstream 14343 10249808 ~ 10250125 (-)
G105361 NA non-coding downstream 14859 10243948 ~ 10249609 (-)
G105339 NA non-coding downstream 88869 10173478 ~ 10175599 (-)
G105329 NA non-coding downstream 151448 10112785 ~ 10113020 (-)
LOC122358386 NA non-coding upstream 2524 10269204 ~ 10269968 (-)
LOC122358536 NA non-coding upstream 17342 10284022 ~ 10284472 (-)
G105368 NA non-coding upstream 22796 10289476 ~ 10289849 (-)
G105378 cltcb,cltc,LOC107554261,LOC107659923,LOC107713425,LOC106603518 non-coding upstream 35716 10302396 ~ 10305221 (-)
G105375 NA non-coding upstream 54808 10321488 ~ 10325416 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 467545 9763871 ~ 9796923 (-)
G105059 NA other downstream 708681 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 827671 9434426 ~ 9436797 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 1218353 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 1601604 8657688 ~ 8662864 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 245951 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 392254 10658934 ~ 10663588 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 806601 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 1035550 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 1059832 11326512 ~ 11342116 (-)

Expression


Co-expression Network