LOC122358610


Basic Information

Item Value
gene id LOC122358610
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10279272 ~ 10281448 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258493.1
GCGGGTTTTCAATGCTCTGCGCTCTAGCGgctgcaaaacaaaatgtgtatgCCTTGTCATATTTACGGTTGCAGTAATCTTAGTCCTTGGTGTGTTGTTTTGACCTCATTATTGGACTGTGTTTGGAAGGACATAAACGTAAATGTCATTCTCACTTTTATAGTATGTCTTACACTGCGCCTTCTACAATTTGGATGCTTACGCCACATGTAGGAATCccgtctgcgttagacTACATCTTCAGCCGTTACACTGTGGGAGATCAGCTGGGCAAAGGTGGATTTGGGGTGGTGTATGAAGGAACGCGTCTGGAGGATAATATTAAAGTGGCTTTGAAATACGTCACAAAGACGGAGCAAATGGAATGTGTATTCCTTCCTGATCATGCAGAGCCTCTTCCAAAAGAGATCGCCTCACCATCATGGCGAATAAAGGTCGAAGAGTGCCAGAGATCATCCGGCTGCTGGAGTGGAGGGACCACCCTGACCACTTCGTCATGGCGCCACGGTGGAAGCCTGGACGAGGAGAAAGCGCGGCAGATCATGTGGCAGGCGACTAACGCCGCACACATGTGCTGCCTCCGAAAGGTGTTCCACCGTGACGTCAAACTGGAGAACCTTCTCATCAACAGGAGACATCCGAAGTCAGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258493.1 True 653 mRNA 0.49 5 10279272 10281448

Neighbor

gene id symbol gene type direction distance location
LOC122358609 NA coding downstream 3304 10272889 ~ 10275968 (-)
LOC122358608 NA coding downstream 7189 10270001 ~ 10272083 (-)
LOC122358607 pim3 coding downstream 12592 10264468 ~ 10266680 (-)
LOC122358606 pim3 coding downstream 18105 10259235 ~ 10261167 (-)
LOC122358604 NA coding downstream 24703 10252592 ~ 10254569 (-)
tubd1 tubd1,LOC107728776,LOC107659941,LOC107579697,LOC107581164 coding upstream 57086 10338534 ~ 10342890 (-)
LOC122358984 LOC107713431,LOC107701403,LOC107728777,LOC107597591,LOC100002059,LOC107582660,LOC107659940 coding upstream 138806 10420254 ~ 10429603 (-)
phldb1b phldb1,LOC107701414,LOC107659918,LOC107717178 coding upstream 300755 10582203 ~ 10637949 (-)
arcn1b arcn1b,LOC107713460,LOC107701413,LOC107582579,LOC107597516,LOC107659917,LOC107717188 coding upstream 370750 10652198 ~ 10657750 (-)
pih1d2 pih1d2,LOC107701408,LOC107577555,LOC107699912,LOC107597596 coding upstream 391167 10672615 ~ 10674737 (-)
LOC122358386 NA non-coding downstream 9304 10269204 ~ 10269968 (-)
G105362 NA non-coding downstream 27277 10245464 ~ 10251995 (-)
G105363 NA non-coding downstream 29147 10249808 ~ 10250125 (-)
G105361 NA non-coding downstream 29663 10243948 ~ 10249609 (-)
G105339 NA non-coding downstream 103673 10173478 ~ 10175599 (-)
LOC122358536 NA non-coding upstream 2574 10284022 ~ 10284472 (-)
G105368 NA non-coding upstream 8028 10289476 ~ 10289849 (-)
G105378 cltcb,cltc,LOC107554261,LOC107659923,LOC107713425,LOC106603518 non-coding upstream 20948 10302396 ~ 10305221 (-)
G105375 NA non-coding upstream 40040 10321488 ~ 10325416 (-)
G105389 NA non-coding upstream 45636 10327084 ~ 10327564 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 482349 9763871 ~ 9796923 (-)
G105059 NA other downstream 723485 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 842475 9434426 ~ 9436797 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 1233157 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 1616408 8657688 ~ 8662864 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 231183 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 377486 10658934 ~ 10663588 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 791833 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 1020782 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 1045064 11326512 ~ 11342116 (-)

Expression


Co-expression Network