LOC122358386


Basic Information

Item Value
gene id LOC122358386
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10269204 ~ 10269968 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252600.1
GAGACATCCGAAGTCAGGCTGATCGACTTCGGATGCGGGGACGTTCTGGGGAGTTCACCGTTCAGGACATACCATGGCACGGTGGAGTACTCTCCTCCTGAGTACCACCGCAGTGGAGAGTACAACGGCTGGCCGGCGACGGTCTGGTCACTAGGGATCGTAATGTTCACATTGTTGTGTGGACATTTCCCTAGTGACCATGACCTGTTCCTGCTGCAGCACAAGAAGTGGTCCAAAGCCGGCCTGTCGCGGGAGTGCTGTGACCTCCTCGGGGTTCTCCTCCACGAGAAGCCAGTCCGGCGACTTGGTCTGGGGCAAATCAGGTCCCACAACTGGTTCACGgtcaTCTTGTAGGACCACTCCAGTCTGCGTCTCTCTTGCAGCTTTGCGTCTTGCGGGCTGCAGCGGGAAGCGCTTCCATCCCTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252600.1 True 429 lncRNA 0.59 4 10269204 10269968

Neighbor

gene id symbol gene type direction distance location
LOC122358607 pim3 coding downstream 2524 10264468 ~ 10266680 (-)
LOC122358606 pim3 coding downstream 8037 10259235 ~ 10261167 (-)
LOC122358604 NA coding downstream 14635 10252592 ~ 10254569 (-)
itgae.2 LOC107701425,LOC107582635 coding downstream 41454 10215863 ~ 10227750 (-)
cul5a cul5,cul5a,LOC107714978,LOC107582587,LOC107554266,LOC107701426,LOC107659927 coding downstream 54600 10204705 ~ 10214604 (-)
LOC122358608 NA coding upstream 33 10270001 ~ 10272083 (-)
LOC122358609 NA coding upstream 2921 10272889 ~ 10275968 (-)
LOC122358610 NA coding upstream 9304 10279272 ~ 10281448 (-)
tubd1 tubd1,LOC107728776,LOC107659941,LOC107579697,LOC107581164 coding upstream 68566 10338534 ~ 10342890 (-)
LOC122358984 LOC107713431,LOC107701403,LOC107728777,LOC107597591,LOC100002059,LOC107582660,LOC107659940 coding upstream 150286 10420254 ~ 10429603 (-)
G105362 NA non-coding downstream 17209 10245464 ~ 10251995 (-)
G105363 NA non-coding downstream 19079 10249808 ~ 10250125 (-)
G105361 NA non-coding downstream 19595 10243948 ~ 10249609 (-)
G105339 NA non-coding downstream 93605 10173478 ~ 10175599 (-)
G105329 NA non-coding downstream 156184 10112785 ~ 10113020 (-)
LOC122358536 NA non-coding upstream 14054 10284022 ~ 10284472 (-)
G105368 NA non-coding upstream 19508 10289476 ~ 10289849 (-)
G105378 cltcb,cltc,LOC107554261,LOC107659923,LOC107713425,LOC106603518 non-coding upstream 32428 10302396 ~ 10305221 (-)
G105375 NA non-coding upstream 51520 10321488 ~ 10325416 (-)
G105389 NA non-coding upstream 57116 10327084 ~ 10327564 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 472281 9763871 ~ 9796923 (-)
G105059 NA other downstream 713417 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 832407 9434426 ~ 9436797 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 1223089 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 1606340 8657688 ~ 8662864 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 242663 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 388966 10658934 ~ 10663588 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 803313 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 1032262 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 1056544 11326512 ~ 11342116 (-)

Expression


Co-expression Network