si:ch211-167j9.5 (si:ch211-167j9.5,LOC107683836,LOC107601741,LOC107585561,LOC107718298,LOC107690476,LOC107734097)


Basic Information

Item Value
gene id si:ch211-167j9.5
gene name si:ch211-167j9.5,LOC107683836,LOC107601741,LOC107585561,LOC107718298,LOC107690476,LOC107734097
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13514829 ~ 13521530 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259117.1
CCTGACACAATACTTTCCTGCAAGAGTATTTcccttttaatgaaatatacaaattaagCATCAAGACCTTTTCGCGCACTGTGGGTCGCACAGTATTTCACGCTTTTTATATTTGGAGACTAGCGTGCTGTAGTCAGGAAGCGCGTCGACTTGCATGTCGTGCTACTTATAGAATTCTGCTCCAAACCACAGGCGCAGAAGATTTGTGGCTTATTGTTCTGAAGAGCACCTTAGCCTCAGTGGGCTTCATGCACGGTGCTGTCTCGTGCAGAAGGAGGTTAGACAATGGTGTGCGTTGCATGATGAGTTCAGCCCGGGGACTTGCTACTTTAATTGTCTTTTCTACAAGTTCTGATGAAAGATTTTTAAACGACATGTGATGCTATTGGTGTCATTATGGCTGATACACAGAATCTCGATTTTGGACACATTATTTTGATCTGCATCTATGCCGTAACCATTTTCTTCATGTTTCTGCTCGGATACCTTTGCCTAAACaaATATCGGTCAATGAAGAAGGTCATACGGGAGCTAAAAGAGAAGAGGCTGTCTATTCCTTCCCAAAATTCTCCTCCTCCATCTCCCAGTGTCCTGAATATTCCTGAACTGCCCGATAATACTACAGAGAGCCCATTACAGAGACACCAAACTAAATCAAGCTCCAGATTTCCCTGGAAGCCTCCGTTACAGGTTCCTCGGTTCACGAAGGCAGACCTAAACCTTATTCAGCTCATAAAGGCAGGTCGAGAAGGAGTCTTCTACAAAGCAAGGATAATAAGAGGCACGTGTCGAGGCCATTCACTGGTCACTTGCAAAATTGGAAAAGAAGGTATCACCTCAAAGCAGATGGAAAATGAGGCATCTGTTATGAGAAAACTGGCGtatcataaaaatgtgatgCAGCTGCTGGACTGGAATACAACCGAAGAGCCGTACATGCTGATCATGGAGTTCATGAGCTACGGAACCCTGCGCAGTtttgttcagaaaaacaaagacgAGCTTATTGCCGACCCTGAACTGCAGAGCCAGTTCACCATTGTGTCCTACCACATCGCCCTGGCCATGGAGCACTTGCGCTCCAAAATGGTGGTGCACTGCGACCTTGCCTTAAGGAACATTCTGGTGAGCCGATTCCCTTGGGAGGTGAAGGTAGCAGAGTTTGGCCTGGCCAGAGACCTGACCCGTATGAGGAGCAGACGCAGCAGCaggaaaaaacaacagaagGAGCGTGTGCCGCTGCGCTGGTATCCTCCAGAGTACTTCAGGAACAACTACTACAGCTTTAAGGGAGATGTCTGGGCGTTTGGTATAGTGCTGTGGGAAATGCAGACATTCGgCACCTTGCCATATACAAATCTGAACACATCTGAGCAAGTGGTGTATAGCATCTGTGCTGGATGCAAGAACACTGTGCCCAACACCTGCCGTCCAGAAATagaACAGATAATGAAAGACTGCTGGATGGATCCATACACAAATAGACCTTCATTTACAGACATTGTCAAGATCCTGGAGAGTGTCGTGGAGAGTGATGGGGATTATGTGGACGTTGACAACCAAAGGATCTTGAATGCAgaggaaaaatgaaataaaatacgcATAGAGCTAGCTGTTTTTGAATTTCTTCGAGAATTATGTAGCAATTGTTTGATCTTAGTTCTCATTTAACATCTAACTGGCATACTTTTTGAACAGTGTTTTTAAGGATTCATTTTACATATGCTTCATTTGTTAGCAGGAAGACATTACACAACTCTAATGACCTAGTGTTCGTGACATGTTCCAgtgaatattttgaaaataaccaTCTAAAAAAAGTGTCTGTGATTTAAGTGTTTGTGATTAacatcaaataatttaataataaaaatgtaaaatatcagtttttataaaaaaa
>XM_043259118.1
CACTTGCCTGACACAATACTTTCCTGCAAGAGTATTTcccttttaatgaaatatacaaattaagCATCAAGACCTTTTCGCGCACTGTGGGTCGCACAGTATTTCACGCTTTTTATATTTGGAGACTAGCGTGCTGTAGTCAGGAAGCGCGTCGACTTGCATGTCGTGCTACTTATAGAATTCTGCTCCAAACCACAGGCGCAGAAGATTTGTGGCTTATTGTTCTGAAGAGCACCTTAGCCTCAGTGGGCTTCATGCACGGTGCTGTCTCGTGCAGAAGGAGGTTAGACAATGGTGTGCGTTGCATGATGAGTTCAGCCCGGGGACTTGCTACTTTAATTGTCTTTTCTACAAGATATCGGTCAATGAAGAAGGTCATACGGGAGCTAAAAGAGAAGAGGCTGTCTATTCCTTCCCAAAATTCTCCTCCTCCATCTCCCAGTGTCCTGAATATTCCTGAACTGCCCGATAATACTACAGAGAGCCCATTACAGAGACACCAAACTAAATCAAGCTCCAGATTTCCCTGGAAGCCTCCGTTACAGGTTCCTCGGTTCACGAAGGCAGACCTAAACCTTATTCAGCTCATAAAGGCAGGTCGAGAAGGAGTCTTCTACAAAGCAAGGATAATAAGAGGCACGTGTCGAGGCCATTCACTGGTCACTTGCAAAATTGGAAAAGAAGGTATCACCTCAAAGCAGATGGAAAATGAGGCATCTGTTATGAGAAAACTGGCGtatcataaaaatgtgatgCAGCTGCTGGACTGGAATACAACCGAAGAGCCGTACATGCTGATCATGGAGTTCATGAGCTACGGAACCCTGCGCAGTtttgttcagaaaaacaaagacgAGCTTATTGCCGACCCTGAACTGCAGAGCCAGTTCACCATTGTGTCCTACCACATCGCCCTGGCCATGGAGCACTTGCGCTCCAAAATGGTGGTGCACTGCGACCTTGCCTTAAGGAACATTCTGGTGAGCCGATTCCCTTGGGAGGTGAAGGTAGCAGAGTTTGGCCTGGCCAGAGACCTGACCCGTATGAGGAGCAGACGCAGCAGCaggaaaaaacaacagaagGAGCGTGTGCCGCTGCGCTGGTATCCTCCAGAGTACTTCAGGAACAACTACTACAGCTTTAAGGGAGATGTCTGGGCGTTTGGTATAGTGCTGTGGGAAATGCAGACATTCGgCACCTTGCCATATACAAATCTGAACACATCTGAGCAAGTGGTGTATAGCATCTGTGCTGGATGCAAGAACACTGTGCCCAACACCTGCCGTCCAGAAATagaACAGATAATGAAAGACTGCTGGATGGATCCATACACAAATAGACCTTCATTTACAGACATTGTCAAGATCCTGGAGAGTGTCGTGGAGAGTGATGGGGATTATGTGGACGTTGACAACCAAAGGATCTTGAATGCAgaggaaaaatgaaataaaatacgcATAGAGCTAGCTGTTTTTGAATTTCTTCGAGAATTATGTAGCAATTGTTTGATCTTAGTTCTCATTTAACATCTAACTGGCATACTTTTTGAACAGTGTTTTTAAGGATTCATTTTACATATGCTTCATTTGTTAGCAGGAAGACATTACACAACTCTAATGACCTAGTGTTCGTGACATGTTCCAgtgaatattttgaaaataaccaTCTAAAAAAAGTGTCTGTGATTTAAGTGTTTGTGATTAacatcaaataatttaataataaaaatgtaaaatatcagtttttataaaaaaa

Function

symbol description
si:ch211-167j9.5 Predicted to enable non-membrane spanning protein tyrosine kinase activity and signaling receptor binding activity. Predicted to be involved in cell differentiation; innate immune response; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be extrinsic component of cytoplasmic side of plasma membrane.

NR:

description
fibroblast growth factor receptor homolog 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259117.1 True 1900 mRNA 0.43 12 13514829 13521524
XM_043259118.1 False 1755 mRNA 0.44 10 13514829 13521530

Neighbor

gene id symbol gene type direction distance location
tmem97 tmem97,LOC107585564,LOC107743752,LOC107690436,LOC107718286 coding downstream 137 13513368 ~ 13514692 (-)
rad1 rad1,LOC107601739,LOC107585563,LOC107743754,LOC107690438,LOC107718285 coding downstream 3894 13508176 ~ 13510935 (-)
bbc3 LOC107743728 coding downstream 13798 13491553 ~ 13501031 (-)
zc3h4 zc3h4,LOC107585556,LOC107683834,LOC107743691,LOC107718283,LOC107601737,LOC107690443 coding downstream 34264 13469578 ~ 13480565 (-)
zgc:154093 LOC107743693,LOC107585559,LOC107718281,LOC107683833,LOC107690442,LOC107690441,LOC107601736 coding downstream 51467 13461640 ~ 13463362 (-)
usp32 usp32,LOC107585566,LOC107683840,LOC107690434,LOC107601698 coding upstream 163 13521693 ~ 13560911 (-)
appbp2 appbp2 coding upstream 43573 13565103 ~ 13574765 (-)
LOC122359517 pipox,LOC107664955,LOC107585605 coding upstream 156955 13678485 ~ 13692629 (-)
LOC122358517 plekhg2,LOC107586265,LOC107662784,LOC107657556,LOC107726101,LOC107729120 coding upstream 194055 13715585 ~ 13741851 (-)
ccdc92ba si:dkey-54n8.4,LOC107664895,LOC107743748,LOC107685051,LOC107585587,LOC107744787 coding upstream 405261 13926791 ~ 13938370 (-)
G106442 NA non-coding downstream 569456 12945087 ~ 12945373 (-)
G106211 LOC107709112 non-coding downstream 674432 12838764 ~ 12840397 (-)
G106184 NA non-coding downstream 773755 12738051 ~ 12741074 (-)
G106137 LOC107657248,LOC107601702,LOC107709130,LOC107586283 non-coding downstream 842381 12672187 ~ 12672448 (-)
G106099 NA non-coding downstream 916256 12598286 ~ 12598573 (-)
G106525 NA non-coding upstream 84654 13606184 ~ 13606897 (-)
G106541 NA non-coding upstream 146041 13667571 ~ 13669379 (-)
G106548 NA non-coding upstream 231792 13753322 ~ 13756160 (-)
G106561 NA non-coding upstream 263648 13785178 ~ 13798248 (-)
G106572 LOC107664934,LOC107743664,LOC107585584,LOC103047044,LOC107744786,LOC107592620,LOC107690414 non-coding upstream 295858 13817388 ~ 13817880 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other downstream 53726 13454482 ~ 13461103 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other downstream 1224777 12280291 ~ 12290052 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other downstream 1481235 12030648 ~ 12033594 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other downstream 1658934 11842766 ~ 11855895 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 2157276 11353646 ~ 11357553 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 223025 13744555 ~ 13751057 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other upstream 357055 13878585 ~ 13881694 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other upstream 362390 13883920 ~ 13905494 (-)
cluha cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 other upstream 387276 13908806 ~ 13925727 (-)
mmp20a NA other upstream 482211 14003741 ~ 14009286 (-)

Expression


Co-expression Network