appbp2 (appbp2)


Basic Information

Item Value
gene id appbp2
gene name appbp2
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13565103 ~ 13574765 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259116.1
AAGTGTCATAGAGTGGGCGGGGCATCTCGATCGGGGATGAGCTTTAAACATGAGAGCATAACCTTAGGGTTGTGTTCTCTTTCATAACAGTCCGTTTCGATCTCAAAAAGCGCTTCCAGCCGCGGGGGTGTATGAGGAGCATCCGAGTAAAGAGTTTTACCTCGATCAGGTAGCGAAGGAGGTGAAAGTAGGAGTGGAAGAGGGGGGGCTGTGGTTGGATTtagtgaaagaaaacaatatggCCGCTGTGGAGCTGGAATGGATCCCTGAGACCCTGTACAACACCGCTATCTCAGCCGTGGTCGACAGCTACGGCCGATCGCGACGGGACATCCGCTCTCTGCCTGAAAATATACAGTTCGATGTGTACTACAAGCTTTACCAGCAAGGCCGGCTCTGCCAGCTGGGAGGGGAGTTCTGTGAGCTGGAGGTCTTCGCTAAAGTCCTCAGGGCCTCTGACAAAAGGCACCTCCTACACCACTGCTTCCAGGCTCTGATGGACCACGGTGTAAAGGTCGCTTCAGTCCTAGCCAACTCTTTCAGCCGCCGGTGTTCATACATCGCGGAGTCGGATGCGCATGTGAAAGAGAAAGCTATACAATTTGGCTTTGTTTTAGGTGGCTTTTTGTCGGATGCCGGCTGGTATGGAGATGCAGAGAAAGTCTTCCTGTCTTGTCTCCAGCTGTGCACATTACACGATGAGGTTCTTCACTGGTATCGGGCAGTAGAGTGTTGCGTGAGGTTACTTCACGTCCGCAATGGCAACTGCAAATACCACCTGGGAGAagaaaccttcaaactggcccAGTCTTACATGGACAAACTAGCCAAACATGGCCATCAGGCTAATAAGGCTGCCCTGTATGGAGAACTGTGTGCCCTACTCTTTGCCAAAAGTCACTATGATGAGGCTTATAGGTGGTGTATAGAGGCTATGAGGGAGATCACAGTTGGCTTACCTGTGAAAGTAGTAGTTGATGTTCTCAGACAAGCCTCTAAGGCATGTGTTGTTAAGCGGGAGTTTAGGAAAGCGGAACAACTGATAAAACATGCAGTCTTCTTGGCACGGGAACATTTCGGGCACAAGCACCCAAAATACTCGGATACACTACTAGATTATGGATTTTATCTACTAAATGTGGATAATATCTGTCAATCAGTGGCCATTTACCAGACTGCACTAGATATTCGGCAGTCAGTGTTTGGAGGAAAGAATATTCATGTTGCAACTGCTCATGAGGACCTGGCGTATTCGTCCTACGTCCATCAGTACAGCTCTGGTAAATTCGACAATGCACTATTCCACGCAGAACGTGCCATAGACATCATAACTCACATTCTCCCTGAAGACCATCTGCTGCTGGCCTCATCCAAGAGGGTGAAAGCCCTGATCCTGGAGGAGATCGCCATTGATTGCCATAACAAAGAAACAGAGGAACGCCTTCTGCAGGAGGCCCATGATCTGCACCTCTCCTCCCTGCAGTTGGCCAAAAAAGCTTTCGGAGAGTTCAACGTTCAGACGGCAAAACACTACGGGAACCTGGGCCGCCTCTACCAATCCATGCGCAAGTTCAAGGAGGCAGAGGAGATGCACATCAAGGCCATTCAGATCAAGGAGCAGCTGTTGGGACAGGAGGACTATGAGGTGGCTCTGTCAGTGGGACACTTGGCCTCGCTTTACAACTACGACATGAATCAGTATGATGATGCAGAGCGCCTGTACTTGCGTTCCATCGCTATTGGCAAGAAACTGTTCGGGGAGGGTTACAGTGGACTGGAATACGACTACAGAGGCCTGATAAAACTGTACAACTCAGTTGGAAACTACGAGAAGGTCTTTGAGTACCACAATATTCTGTCCAACTGGAACCGTTTAAGGGACAGGCAGTTTGCGGTAGCCGACGCGCTGGAGGACGTCAACACAAGCCCCCAGGCCACAGAGCAGGTGGTGCAGTCTTTCCTGCTTTCCCAGAGCCACGGAGCCGGGCGTCCCTGCTTGGGCTAACGGCCCGGGAAGCCCACCTGAAACCTAGATGTGCACACCCACCCCCCATTTCACCCCCTCACATCCATCGATTCACAAGTAGTCCAGACGGGCGGGGAGTGTGAATATTATCCTGAGCTGTCAATCCACTTGTACCAGCAACTCCTCAAACCCCTTTCCTTAAAATGGGAGAAGAACCATGAGATCTTTGAGACCATGCTAACACTCATGATGGATAAGCGACCATTCATCCGATTCATTCACTCTCCTTTGAAGAACCTGGCCATTTCTCTCACTTCAAGAGgagttgaataaaaaaaaataaaaaaaacggcGCAGTCCGACATAGACGGAAAACTTCCGCACCctcttacgttttttttttaaattttattttgtatttgaagGAGAGTCGCTCCACACTACAGGAATACTTTATCACCACATTGTCTATTTGTGGAGGAAATTGCTCGGCGCAGCTCCCACAGAACGAGATTCGACATCGTTCATTATAACCAAGTGAAGGAACATCCGTAGACATCCGTGTCCCCATTAACACGAGGATTAGAGCTCGACTTCATGTAATGCAAAGCTTTGCATTTGAGGATTACCTTGTGTGCTCTCTGGAAAATGAGACCAGCCATGTTACATTATGGaccattatgtttatttttgcttttttttttattaataattcatgtcACGTGTGGAATTTACGGACCAGCGAGTTTACGATTGCTCTAGATACCTTGTTTTAAGTTCTCTTCTGGTTTTGTATTCCCTTAGTACTGACATAGCTTATTTTAAACTGCCAATAATTTATATGCAAGGTATGCTACAACTTGTAGGTGAAACGGATGAGCCAAAATGACTTCTGTTCATAATAATATGTGCGCGACCACCGCTAATTGCCATAATATGAACTAAACCGAGTTCACGGAGCTGGCTTTCTGTCATAGCGAAGCCTtattcacgcacacacacgatATAAGCTGAAGCGGTGATAGTAACGAGACCAGGTTTCCCAGGTCGTTGTTGTTTTCCTTTCAGAGCTCAGCCCCGGGCGGCGTAGATTAACACCCCTGGCCCACTGCCAGCTGACTGGACACACAGAGAAAAGGGCTGAGCGCAGCACCTGTCATTGTGAAGAGGCTCCCCTGCTGGGAAACCTGCGTTATAGTGCACATGGGTCTGAATCCACAGTGCAATATTTGCAGAACGCACCTGTACCACTCCAAAAACCAATCAGTTTGACTCATTTCACTGCCGCTTCTCTCTCGAATAGATCCAAAAGCCACACAGACTCACGACCAAGTTGAGAACATTGCAAGTTTGAACGAGGACCGTTAAGATTAAATTGGCATCAACACTTTCATAAAGAACTCATTGCTGAAACGAAGCCTTGCTGCTGGCCAGTCATGTAGAATGTGCTTTTAGTGTCTCGCCACATTTTTAGCTCCTAGCCGGCAGCACCGGGACCCCAGATCAAGCTGAAGTCCCAGCCTTAGTCTTAAAGGACTCTCAGCTGGCTGGGATctgctttgacttttttttttttttttttttttgagtagcTCGATTTGAACGAAACCTCCACCTGCAGCTTTTCAAACACTTTTAGCCCCCCGTAAACAGAGCAGGAGATGGCTTAGGACAGGTGAGGGACGATATTTCGCACATTTTGACTCCTTAAGAATCCCTTTGTTGTTATGTTTGAGGTTTTATCGCGAGGAATGAAGTGGTGTTAAAAAGGAAAGTCCACCTACAATGAAATTCTGTCGTTATTTGCTTACCTTcctgttattccaaacctgtgtgcatttctttcttctgtggtacataaaagatattttgaagaatgttcaaCCAAACTGATTTCCACTGACTTCCACCTTGTGGACAAAAATGCCATGGAAGTCAGTAGGGAACGGAAAATATCATGTCATACGGGTTTGGGAAAAACATGAGCTTGAGTAAATATAATGGAATattcgtttgttttttttggtggacTTTCTTTAATACCATATTTGAGGCAGCAAGGTAAGGACAGGAATTTGCCTTGGTTAGAGAGATGGAATATTGTAACAAATAAACTGTGATCTTGCGAAATTTGTAAGTGCATTTCCATTGACTATGTGCTGAAAATTGACTGAATTATTCTCCTATCAGACGATGAACATcaaatgtggggaaaaaaaatgcacatgggAAACTTTAACAAGTAAGCTTGGTGGATGCTGAGTGAATTTATAACGTAGCTCTGATTGCTTCCTTCTGAATGTCGATTCAAGGGCTTATTTGTCAACCTCAAGTGGTATTTCATGGTTAGAAAGACGGTTGATCGCTGTTGATCAAACCCAAACTGCTTCTCCATCTGAATAGGTCACAGGTCCCCAAAAATCAAAGGTGCTTCTGGGTCAAACGTTctctatttttgcatgtttaagtAAATGTATATAGATGTAGATGCATAGCTACAAGTGGTTATTGTCCCAGTGAGCTCCatagtgacagaaaaaaaaacattttacactgaGCAGTTAATAAATGTTCCatgaaataagagaaaaaaagaatgaactCTGAAGTGTTAAACAGATCACAGAAACTAATAAATGGCATCCTCTGACAATAAAAGCAATCCTGTCACTTCAACGTTTCTTCGAAACCTGCCCTCAGAGAGTTGGAGAATGTAATTAAGGTTTGATAGCTGATACAGTGGGGCCTTTTAGATGCTAATTATCTTCATGAAGTCCTCGGACACGCTGCCACGTGTAGATTGTGATTTAGCCAAAGTGCTGTTTCAGATGGACGATGGCGATCGCTGAAGTAACAACCTATGAGTGGACGTGATCTcttatgactttcttttattGTCTGTATTCATTGGAGACACTCTAGAAGagtttttgatcaaatccaATGACaaagaagaggaaaaatgtgttctttaaCATTGATACTGACTGTTACCCTGGAAATGTCAGTAACCTGTGCCACAGTTGAGCCTCTGCTTGGAATCTCTTCAGTCATTGGCTTTATGTAACTCACCCTCAGTAGAGTCTGCTGTACATTGTACATCTGTAACCACCAAATCATTATTAAACTCATTTGTATCCAC

Function

symbol description
appbp2 Predicted to act upstream of or within intracellular protein transport. Orthologous to human APPBP2 (amyloid beta precursor protein binding protein 2).

NR:

description
PREDICTED: amyloid protein-binding protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259116.1 True 5108 mRNA 0.45 13 13565103 13574765

Neighbor

gene id symbol gene type direction distance location
usp32 usp32,LOC107585566,LOC107683840,LOC107690434,LOC107601698 coding downstream 4192 13521693 ~ 13560911 (-)
si:ch211-167j9.5 si:ch211-167j9.5,LOC107683836,LOC107601741,LOC107585561,LOC107718298,LOC107690476,LOC107734097 coding downstream 43573 13514829 ~ 13521530 (-)
tmem97 tmem97,LOC107585564,LOC107743752,LOC107690436,LOC107718286 coding downstream 50411 13513368 ~ 13514692 (-)
rad1 rad1,LOC107601739,LOC107585563,LOC107743754,LOC107690438,LOC107718285 coding downstream 54168 13508176 ~ 13510935 (-)
bbc3 LOC107743728 coding downstream 64072 13491553 ~ 13501031 (-)
LOC122359517 pipox,LOC107664955,LOC107585605 coding upstream 103720 13678485 ~ 13692629 (-)
LOC122358517 plekhg2,LOC107586265,LOC107662784,LOC107657556,LOC107726101,LOC107729120 coding upstream 140820 13715585 ~ 13741851 (-)
ccdc92ba si:dkey-54n8.4,LOC107664895,LOC107743748,LOC107685051,LOC107585587,LOC107744787 coding upstream 352026 13926791 ~ 13938370 (-)
tlcd2 tlcd2,LOC107664963,LOC107743747,LOC107585588,LOC107592621,LOC107744789,LOC107685052,LOC103028751 coding upstream 365590 13940355 ~ 13955616 (-)
hif1al LOC107744792,LOC107664924,LOC107743660,LOC107585591 coding upstream 408102 13982867 ~ 13995314 (-)
G106442 NA non-coding downstream 619730 12945087 ~ 12945373 (-)
G106211 LOC107709112 non-coding downstream 724706 12838764 ~ 12840397 (-)
G106184 NA non-coding downstream 824029 12738051 ~ 12741074 (-)
G106137 LOC107657248,LOC107601702,LOC107709130,LOC107586283 non-coding downstream 892655 12672187 ~ 12672448 (-)
G106099 NA non-coding downstream 966530 12598286 ~ 12598573 (-)
G106525 NA non-coding upstream 31419 13606184 ~ 13606897 (-)
G106541 NA non-coding upstream 92806 13667571 ~ 13669379 (-)
G106548 NA non-coding upstream 178557 13753322 ~ 13756160 (-)
G106561 NA non-coding upstream 210413 13785178 ~ 13798248 (-)
G106572 LOC107664934,LOC107743664,LOC107585584,LOC103047044,LOC107744786,LOC107592620,LOC107690414 non-coding upstream 242623 13817388 ~ 13817880 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other downstream 104000 13454482 ~ 13461103 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other downstream 1275051 12280291 ~ 12290052 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other downstream 1531509 12030648 ~ 12033594 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other downstream 1709208 11842766 ~ 11855895 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 2207550 11353646 ~ 11357553 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 169790 13744555 ~ 13751057 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other upstream 303820 13878585 ~ 13881694 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other upstream 309155 13883920 ~ 13905494 (-)
cluha cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 other upstream 334041 13908806 ~ 13925727 (-)
mmp20a NA other upstream 428976 14003741 ~ 14009286 (-)

Expression


Co-expression Network