XLOC_006758


Basic Information

Item Value
gene id XLOC_006758
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 33457523 ~ 33459318 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013866
attcagtgACCAATTGCCAATTATTTTGATTATGCTACAGTTACTACATAACATTGATCAAGTTTTGTATTTcaacattacattttaatataatctTGTCTTAATTATATTTAAGACATTTGCCAGCAGTCAGTGATGCAGTTATTAGACAGAGAATTTCTTTCTCTTTGCGGTTAAACATTTAACAGACCTGGAGTATAATGCATGGCACAACATGGCATTGATTAGGACACGCTGAAGATCTCAATGAAGATGTTTAGTAAAGTATAACAGGCACAAAGTCCACGACAGTACACTTGGGTTTAGCAGAGTCAGAGTAAACTTTTTCTATCTATTAACAAACATTTATCGTAGTATAAAATCTGGGTCAGGACAAACTAtagttttagaatagaatagaataattcACACACTGTCGTAGGATTTgttgtgcattttaagtttttttttttttcctttttctggtAATGAAACCATTATGTGTTTACTAACTTTCACTAGCCATGACTTGTTTAATACTGAGATTTACTATTTTTGCAATTCAGATGGCAGATCACAAATGGTTACAGATGAGTAATCTTCCCAGTCCTGAAAAGAAAACCCAGCGTAGAggggctcagtgaatgtggtctggattTGGTGCAGGAGGGTCATTTTATCAGAGACATTGTAAAAGAACACAGTTCCTACTTCCTGATCCAGAAACACTCCAATTTTAGAGACCCATGAAATGCTAGTCTGTCGGTTATCATGGCATACAAGAACATTTGCTGTTGGAAAGTCACATTTCCAGGACCTGTTGTCAGAGCCAAATCTACAAGTTCCCCCTCCTTGCAGAAACTGGTCATATGAGAATGCAATAGAACAACCTTTTCCTGCCCACTGAACTTCAAAATAACAGCGTCCAGACAGACTTTCATTACACAATACCTGCCTCTTACGTACATATAAGGAACTCTTCTCTGGTCTTGGGCTGGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013866 True 978 lncRNA 0.37 2 33457523 33459318

Neighbor

gene id symbol gene type direction distance location
XLOC_006756 btbd6a coding downstream 58788 33394116 ~ 33398735 (-)
XLOC_006755 zgc:172120 coding downstream 95332 33342455 ~ 33362191 (-)
XLOC_006754 si:dkey-71p21.13 coding downstream 135982 33320063 ~ 33321541 (-)
XLOC_006753 tmem234 coding downstream 140125 33314673 ~ 33317398 (-)
XLOC_006752 NA coding downstream 156353 33261131 ~ 33301170 (-)
XLOC_006759 rrbp1a coding upstream 152385 33611703 ~ 33639050 (-)
XLOC_006760 snx5 coding upstream 186095 33645413 ~ 33654931 (-)
XLOC_006761 si:dkey-76k16.6 coding upstream 199553 33658871 ~ 33662523 (-)
XLOC_006762 si:dkey-76k16.5 coding upstream 205987 33665305 ~ 33667922 (-)
XLOC_006763 zgc:163030 coding upstream 210618 33669936 ~ 33671694 (-)
XLOC_006471 BX537274.2 misc downstream 23192618 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 32631298 825904 ~ 826225 (-)
XLOC_006741 NA non-coding downstream 461027 32946711 ~ 32996496 (-)
XLOC_006738 CU019663.1 non-coding downstream 649882 32793864 ~ 32807641 (-)
XLOC_006731 NA non-coding downstream 890267 32457931 ~ 32567256 (-)
XLOC_006768 BX649403.1 non-coding upstream 1179311 34638629 ~ 34638746 (-)
XLOC_006769 BX649403.2 non-coding upstream 1184832 34644150 ~ 34644281 (-)
XLOC_006773 CR932983.2 non-coding upstream 1723676 35182994 ~ 35194759 (-)
XLOC_006774 NA non-coding upstream 1745979 35205297 ~ 35289437 (-)
XLOC_006775 CU138575.1 non-coding upstream 1911251 35370569 ~ 35370684 (-)

Expression


Co-expression Network