CI01000001_07231558_07266828 (EIF4G3, EIF4G3B)


Basic Information

Item Value
gene id CI01000001_07231558_07266828
gene name EIF4G3, EIF4G3B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 7231558 ~ 7266902 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_07231558_07266828.mRNA
GTACAGAGACCCCCTGGCCCCCCATATACAGCACATGAAATCAGCAAGGGACACCCTAACCTAGCGGCCACACCGCCGGGTCACGCCTCCTCCCCTGGACTCTCTCAGGTATCAGTTCCAACACTATTCTCTGCGCATCTGTATGGTCATCCTAAAGGCTGGGAGGCAGGAGGAGGGGCAGCATTGAGGAGATGGCAGATTTGTCAGTGTCAGCAGACCGCAGTGTTTGCAGCGGCAGGGAGTGGACACATTCACTCTGTCACCCACACTCACACAGCACACGCTCACTCAGCTGTAGGGATTTTATCAGAGAGGGTAATACTCAAATCCATCCTAACTGCTGTTTCTCCTCCTCTGCCGGTGGTCGTTCCTCCTCGACCTCTCTGGGACCCCGTGACTCCGCAGTCTCCGTACACACAGGGGCAGAATGCCGGCACAACCCCTCTGGTCTACTCTCCACCAACCCAGCCAATGAACGCACAGCCTCAGAGCCGCCCGCGCTGTGCTGTTGTTTATAGTGCAGTTTGTGATGATCAGTTGGTGCTGTGTTTATATGGTACATATAACATGCCTTGCGTCATTACTTCCTCTCTGGATGTACGCTGCATATGCCATGCACAGCTTGTGGTTTATGTGTTTGTGGGTGATCATTCTTACCTCTCGCTTCTTTCTTTCTCTCTGATTCCCTCCCTCTGCCATGCCACTCTTTGCCTTCAATCAGTTTGCCACTGGGCCTCGTCCTACCCATCACCAGGTAATTTTTTCCAGAGGGCGCAGATGCAAACGGCCCGGCCCACCATTCCAAGCAACAACCCTTCCATTCGGCCCACATCTCAGACCCCCACGGCAGCGGTCTATTCCCCCAATCAGCCCATCATGATGACCATGGCTCCCATGCCCTTCCATTCCCCACAGACAGCGCAGTACTACATCCCTCAGTACCGTCACAGTCCTCCTCAGTATGTAGGGCCTCCTCCTCAACAGTACTCAGTCCAGCCCACTGGACCCAGTACCTTCTATGCTGGACCCAGTCCAGGGGACTTCCCTGCACCTTATGGTGAGTTTAGCACCCTCATCCCCTTCCTGTCTGCCAGCTTACAAATACCTATCCGCATCCGAGACCCCAACCAGGGCGGCAAGGATGTCACAGACGAGATATTATCAGGGGTGGGTGGGAGTCGGAACCCAACCCCACCTGGGGGACGGCCTTCCTCCACTCCTACACCTCCACAGTTTTTATGTCCGCACCCTCATTATCCTCACATTTTCTACCTCAAATCCCAGCAGCTGAACAACCAGGTAGCAGATCACGGGCATGCAATGTATAATGTGGACAGCGCCCAGCTCAACTTGAAAACAGATGACAAGCCAAAACCAGAGTTTGCTTCGCAAAGATCTGCATCTCCTGGACTGCGGCAGCCAGAGACTTCGTTGGAAAGAATTGATCCAAGCAGCCCAGTCCAAGAGCCCTCTCCCTCACAGAAAACTGAGCTTCCCCCCTCCGGCCCAGAAACGGCCTCAAGTGTAGCTACAGCCCCCAGTCCTTCCATACCTGCCTCAACAGTGGAGTCAGCTGACGCCCAGAGCCCATCAGCTGAGCCCAGCCCCACTAAAGCTGTCACACCAGAACCTGAGAGCTCTGAACCAGAGAAATCCTCCTCCTCAGAGCAACCCTCACCTCAGAGCCTGTCTGCATCTCCAGACCAGCCCGAAAAGGTTGTCAATGGGCTGACGGACACCGATGCTGCTCCCTTGAGTGAAGACTTGGAATCCCAACCAAGGGAAGTCTCTCCGTTGCTGCCTACATCCAGTGTGCCCCAGTCCCCCAGCCCGGAGCCCAGGCCCATCACACCGGCGCTGGACGCTGAGTCTGCGGTGGTAAAAACGGATAGTCCCTTGCCTCCTGCTGAAGACAGCGCTGGATGTTCTGACGTCCCATTCCTCTCGACCTCCTCTACTGCTGCTATCTCCACCACACCTGCACCTCCTCCAGGACTCATACATCCAAGTCAGGTTTCTGCAGGGTCAGCCAGGAGACCTTCTACAGGAGCAGAGCTCAAAGAAACAGGGAAGGAGATTGAGGCCTTGTCGGACAAGAGAGGCGAGCCTTTCTTGCAGTCCAGAAAAGCTACATCTAGTGCACCAAAGACCTGGAAGAACCCAAAAAAGAACATGCCTGTAGGGCAAGATCAGTGTCCAGACAAAGAGGAGGACATGGATCAGCCCTCTATGGAGTCTGCTGCAGAGAGCCCCAGTCCTCCTCCTGTGGAGGTGGAGAGGAGGCCATCAGTAGGAGCTGTGCTCGAGGAGAACGGAGAACAGGACGTAGAGCCTCAGAGAAACGGAGCTGAACACGCCTCTGAAACTGAAAGCAGTGACAGCATCCACCCGCCTGCAGTCAAAGAGCCGCTGATCAAAGCAGTGCCACAGCCTGCAGAGAAGAATGGCAAGAAGCAGTACGATAGAGACTTCCTGTTGGGCTTCCAGTTCATGCCTGCGTGTGTGCAGAAACCAGAGGGGCTTCCTCCCATTTCTGATGTTGTTCTAGATAAGATTAACCAAAATAAGCTGCCCATGCGGCCAATAGACCCACGTGTGATTTCCAGAGGCCCAGACTTCACGCCAGCGTTTGCGGATTTCGGCCGACAGATTCAAGGAGGCAGGGGAGCACCGCTGCTGAACGTTGGCCTGCGGCGCCCACCTGGACGCAAGATCATCACAAACGTGTCTGTGAACGATGAGGTGCAGCTGAGGACAACAGAGAATGCTTGGAAGCCTGGCATGAAGCGGGAGAGTGCCGTTGAAGATCCAGACGCCCAGAAAACTCAGGAGCTTTTCCGAAAAGTGCGTAGTATTCTCAACAAATTGACGCCACAGATGTTCAACCAGCTGATGAAGCAGGTGACTGACCTCACCATTGACACAGAGGAGCGGCTCAAGGGTGTCATAGACCTGGTTTTCGAGAAAGCCATCGATGAACCCAGCTTTTCTGTGGCCTATGGAAATATGTGCAGCTGTCTGGCCATGTTAAAAGTGCCCATGACGGATAAGCCCAACACCACTGTGAATTTTCGGAAGCTGCTTCTGAACCGCTGTCAGAAAGAGTTTGAGAAGGACAAGGTAGATGACGATGCCTTCGAGAAGAAACACAGGGAGCTGGAGGCAGCTACCTCGGCTAGTGAGCGGGAGAGACTGCAGGAAGAGCTGGAAGAGGCGAAAGACAAAGCCCGCAGACGCTCCATTGGCAACATCAAGTTCATCGGCGAGCTCTTTAAGCTGCGGATGCTGACAGAAGCCATCATGCACGACTGTGTGGTGAAGTTGCTGAAAAACCATGACGAAGAGTCACTGGAGTGCCTGTGCAGGCTGCTCACCACTATTGGCAAGGACTTGGACTTTGAGAAAGCTAAGCCACGAATGGATCAGTACTTTAACCAGATGGAGAAGATAGTAAAGGAGAGAAAGACTTCATCACGCATTCGGTTCATGCTGCAGGATGTTATTGACCTGCGATTGCACAATTGGGTGTCTCGGAGAGCTGACCTAGGCCCTAAGACCATCGAGCAGATCCATAAAGAGGCAAAGTTGGAAGAACAGGAGGAGCAGAGAAAGGTGCACCAGCAACTGCTGTCCAAGGATAACAAGAGGAGACCAGGGGTGCAGAGAGAGGAGACATGGAGCACTGTGCCTATGACCAAGAACAGCAGAACAATAGACCCCACTAAGATTCCCAAGATCTCCAAGCCAACAATAGATGAGAAGATTCAGCTGGGACCAAGAAATCAGAACTGGATTAAGGGCAGCAGTGGAGGGGCTGGAGCCAAGGCCAGTGAGTCAGATGTCTCTCGTCCAAGTGCCAGTTTGAACCGTTACTCACCCCTGCAACCCTCAGCGCCTCCGGCCTCGTCTTTACCCTCTACATCCCCAGATTTTGATGCCAGGAGAGTTCTCAGCAGTCGTGGAAGCTCAGGGCGGGAGCGCAATGACAAGCCATTAAGTGTGGGTCCCACTCGGACAGGGCCCATCTTGTTGGGTAGCAGCAATAAGGAGGCTCCCGAGGAGTCGGTCCAGGAAGTGTCCCGCAGAGACTCTTATGCCTCAGACACACCCAAGCTGCCCGCCAGCACTGCAGACAAGAGCAGACTGGAGCGTAGCCAATCCAGGGAGTCTGCTGTTAAACTTGAAGTACTGTCAGGACCCTCTCCAGATAAAACTGCAGAAGAGGACATGGAGAGGCGGTCCAAGTCTATTATTGATGAGTTTTTGCACATTAATGATTACAAGGAGGCAGTGCAGTGTGTGGAGGAGCTAGAGCAACCTGCCATGCTCTATGTGTTTGTGCGGGTGGGTGTGGACTCCACGCTGGAGAGGAGTCAGATCACGCGAGACCATATGGGTCAGCTGCTCTATCAGCTCCTGCACGCTGGAATCCTCCTCAAACTTCAGTTTTTTAAAGGGTTCTCTGAAACTCTTGAAATAGCAGATGATATGGCCATTGATATTCCCCATATATGGCTGTACCTTGCGGAGCTGGTGACCCCTGTACTTCGAGAGGGGGGAATCTCTATGAGAGAATTATTTAGCGAATTTAGCAAACCATTACTCCCTGTGGGAAGAGCTGGGATATTATTTTCTGAAATATTGCACCTTCTATGCAAACAAATGAAATTAGACTTCACTCTTTCTGACGGCTCAAACCTGACCGAGGCTGTCTCTAAGAGAACGCTCTCGCCTGAGGAACTGAACAAGCAACTTGAAAAACTACTACTTGAGGACATGGCTGGCGATGAACAAATCTTCGACTGGGTTGAGGCCAATCTAGATGAATCAGAAATGAGTTCACCTCCTTTCCTCAGAGCTTTAATGACTGCTGTGTGCAAGGCAGCAGTGAAAACCGAGGGCTCCTCATGCAAAGTGGACTTGACCATAATCCAGAGGAGATTGCCTGTATTACACAAATACCTTAACTCAGACACAGAGAGACAGTTGCAAGCACTTTACGCACTTCAAGCTTTGATAGTAAAACTGGACCAGCCTGCTAATTTGCTCCGGATGTTCTTTGACTGTTTGTACGATGAGGATGTGATATCTGAAGATGCTTTCTATAAGTGGGAAGTCAGTAAAGACCCCGCAGAACAGCAAGGCAAGGGCGTGGCCCTGAAGTCAGTCACCGCCTTCTTCACGTGGCTGCGCGAGGCAGAGGAGGAGTCGGAGGACAATTGACGAGAGGACAAACGGACACATTTGCCAACTAGTGCTGAAGAGACAATAGTCATTTAAACAATAACTGCATCAAA

Function

symbol description
eif4g3b Predicted to enable mRNA binding activity and translation initiation factor activity. Predicted to act upstream of or within translational initiation. Predicted to be part of eukaryotic translation initiation factor 4F complex. Orthologous to human EIF4G3 (eukaryotic translation initiation factor 4 gamma 3).
eif4g3 Enables RNA binding activity. Predicted to be involved in regulation of translational initiation. Predicted to act upstream of or within positive regulation of cellular protein metabolic process; positive regulation of meiosis I; and spermatogenesis. Predicted to be located in cytosol. Predicted to be part of eukaryotic translation initiation factor 4F complex.

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG:

id description
K03260 EIF4G; translation initiation factor 4G

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_07231558_07266828.mRNA True 5297 mRNA 0.52 30 7231558 7266902

Neighbor

gene id symbol gene type direction distance location
CI01000001_07208833_07215412 NA coding upstream 16051 7208283 ~ 7215507 (+)
CI01000001_07056922_07065716 DHRS3, DHRS3A coding upstream 165015 7056922 ~ 7066543 (+)
CI01000001_07045345_07052918 IGSF21B, IGSF21 coding upstream 178588 7045345 ~ 7052970 (+)
CI01000001_06996957_07040074 NA coding upstream 191477 6996957 ~ 7040081 (+)
CI01000001_06981183_06981774 RPL22 coding upstream 249754 6981183 ~ 6981804 (+)
CI01000001_07330166_07335508 GLUT1, GLUT1A, SLC2A1A, SLC2A1B coding downstream 63264 7330166 ~ 7336036 (+)
CI01000001_07405859_07406484 NA coding downstream 138242 7405144 ~ 7406689 (+)
CI01000001_07421548_07447343 RAP1GAP coding downstream 154646 7421548 ~ 7447505 (+)
CI01000001_07527533_07530601 NA coding downstream 260127 7527029 ~ 7531071 (+)
CI01000001_07531945_07539781 NA coding downstream 264639 7531541 ~ 7540586 (+)
G17019 NA non-coding upstream 79133 7152094 ~ 7152425 (+)
G16977 NA non-coding upstream 107565 7091753 ~ 7123993 (+)
G16937 NA non-coding upstream 285407 6936142 ~ 6946151 (+)
CI01000001_06893068_06917387 IFFO2A non-coding upstream 313296 6893068 ~ 6917660 (+)
G16317 NA non-coding upstream 431177 6800168 ~ 6800381 (+)
G16970 NA non-coding downstream 12341 7279243 ~ 7284904 (+)
G17057 NA non-coding downstream 49762 7316664 ~ 7319030 (+)
G17061 NA non-coding downstream 56384 7323286 ~ 7323615 (+)
G16978 NA non-coding downstream 162288 7429190 ~ 7430067 (+)
G15995 NA other upstream 1516607 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 1941602 5279837 ~ 5287698 (+)
G15794 NA other upstream 2166854 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 3610107 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 5560554 1667762 ~ 1671167 (+)
G17234 NA other downstream 765222 8032124 ~ 8032483 (+)
G17353 NA other downstream 1949120 9216022 ~ 9228859 (+)
G17354 NA other downstream 1967561 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 2151426 9435836 ~ 9436373 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00002138 NA coding CM030136.1 CM030136.1 4602406 ~ 4636492 (-)