CI01000001_07558102_07564471 (SLC2A5)


Basic Information

Item Value
gene id CI01000001_07558102_07564471
gene name SLC2A5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 7556925 ~ 7564666 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_07558102_07564471.mRNA
TTATAAATAGGGTCTTAATTAAAATATGCTAACTTGCAGGTTGTGCGTGAAGTCCTGAATTGAGTATGGAGGTCTCTTAGAGGGCAGACAGCAGTGAGACCTGAAAACAGCTTATTCATTTTTTATTAATCTTCAAAGGATTTTCTTCTTTATGTCTGAGAATCTGTCATTATTCATGTTAAATATAAAAATCATAATTTACCTGTTTTTATTTTACATGGCAAAGTGCGAGTTATATATTTTAGGTAAAGACAAAAACTACTTGTCATGTACACTTGCATTAACACTTTTCACCTATAAGGGGTGCAAATGTTTCCCTGTCAGCATTACCTTTTAAATATTGTAGCCTTGAAGAAACCAAAAATACACATGAGGAGCAGAAACTTTATTTGACCACGTGCATTAGTGTGTACATTCTCCTGCTCAATGTTTGCTGCAGGATATGCTTAAACTACTTCTAGAGTAGACTCTAGGCTCTAGTATCATAGTGTGCATGCACATATAAACATTCCAGAACATTAAATACACAAGGGTTAGTCGATATGAGGTCTAAATTACATAATAAATGGCACAGAAACCAATGGAGAGGTCTTCACTATGTTAATTTTATGTTGAAACTCGAAATCTGCTTGCATTACTTTCATATTAAAGTATTATATTAGAATGCTTTATTTGGAGTCTAGTGTACATTTCACATATACAGTACTAGCACCCCAACAATTGACAATTAATGTCATGTGGTTCCCTTTATAGGTGCAGATAGGTAGGTAGCTTACTTTTATCTCTTTATATCTGTTTTTTTAATACCAAACAACTTTAACCTTGGTTTTCAGGGTTGGCTCCAATGTCCAAAGTACAATATACAGCATGATTTCTTTTCGCTGGTGTTCTTTCTAACCATACTGAAGATTTGAAGCATGAAGGAAGAGATCAACATGGAGAGACATGAGAGGAAGGGAGTGAGTACTTTTTACTATATTATATTTCTGCAACAAATAAAATTAAAGCACTTATTTTACATTTTGATACTTCCCTTTTGAATAGCTAACAGACAGACAACAACAGTATTTTTTGTCTCTTCCAAAATACTGCCGCAGCTTCCATATGACTTTAAATGTTTAAGCTAGAATTTTAGTAGCATTTACATATTTTTAAAATTCATGCAAATTTGCAGAAGATGACGCTGATCCTGGCTGCAGCTTCTTTGATCGCCGGGTTTGGTTCGTCTTTTCAGTATGGATACAATGTGGCTGTGATCAACTCACCTGCCCCGGAGATGCGGCAGTTCTACACCCAAGTATATGTGAACCGTTATGGTCCAATGTCAGACGGTCTCCTGACCCTCCTGTGGTCCCTTACTGTGTCTTTGTACCCACTGGGTGGGTTTTTTGGATCTCTTATGGTAGGCCCATTGGTGAACAAATTCGGAAGAAAAGGCACACTCCTGTTCAACAACATCTTCTCTATAGTTCCTGCTGTAATGATGGGTGTGAGTGAAGTGGCAGGGACATTTGAGATCATCATTGTCGCACGCTTTATAGTGGGCATCTGTGCAGGCCTGTCCTCCAATGTGGTGCCCATGTATTTGGGAGAGATTGCTCCCAAGAATTACAGGGGGGCCGTTGGGATAGTGCCACAGCTCTTCATCACCGTTGGCATCCTTGTCGCCCAAGTGTTCGGCATTCGCAATATCCTAGGAAATAAAGAAGGCTGGCCCATCATGTTGGGTCTCACAGGGATTCCAGCTGCCATTGAGCTGCTGCTTCTGCCTTTCCTTCCCGAGAGCCCACGCTACTTGCTCATACAGAAGGGGGATGAAAAATCTGCCAGGAAAGGCCTGCAGCAGCTGCGGGGCTGGGAGGATGTGGATGAGGAGCTGAGTGAGATGCGTGTTGAGGATCAGTCAGAGCGAGCAGAAGGTCGACTCTCTCTGCTCAACCTCTTCACCTTCCGCTCACTGCGCTGGCAGCTGCTGTCTGTAATCTTCATGAACATGGGCCAACAACTGTCAGGAGTCAATGCCATTTATTACTATGCTGACAGCATCTATAGCTCTGCAGGAGTGAAGGATGAGCACGTTCAGTATGTGACAGTCGGAACAGGAGCGGTTAATGTCGTCATGACAATAGCAGCTGTGTTCATAGTGGAGAAATCTGGCAGAAGGTTGTTGCTACTGATAGGCTTTGGTATTTGCTGTTCAGCCTGTGTTCTTCTGACCGTAGCGCTCTACTTCCAGACTACACTGGACTGGATGCCCTATGTCAGCATCGTTTGTGTCATTGTTTACGTCATCGGACATGCTATTGGCCCAAGTCCTATTCCTGTTGTAATAACCACGGAACTGTTCCGGCAGTCTTCTAGACCACCAGCCTTCATGGTGGGCGGCTCGGTTCACTGGCTTTCGAACTTCACAGTCGGCCTGGTCTTCCCTTTTCTAGAGAAAGGCCTGGGTGCGTACAGCTTCATCATTTTTGCCTGCATCTGTCTCGCGACGCTTATCTACATCTGGGTGGTCATCCCAGAGACCAAAAACAAGACCTTTCTTGAGACCAGCAAGCTTTTTGCTCAGAGAAACAAGGTGGATATTGGGGTGGAGGGTGAAGACTTTGAGATCAAAGAGACAGGAGAGGAAAGCAAAGCACAGGAAATTAAAAACACATTTATGTGAATGGGTAGGGGGTCATTCACACAGGACACGTTTTTGCGTTTGTCTGCAGTGCTTTGAAAGAAATTGTTTTTATACACTGACAATATGACAATCCCATGCCAGGATTTTTGAACTCAAAAACGTGTCCTTTTCATTGCACTCTGTATTTGTGTTAATGACAAATAAGAATGTACAAGAAAGAAATGTTTTTCTTTA

Function

symbol description
slc2a5 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in heart; integument; liver; muscle; and pleuroperitoneal region. Orthologous to human SLC2A5 (solute carrier family 2 member 5).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_07558102_07564471.mRNA True 2863 mRNA 0.42 11 7556925 7564666

Neighbor

gene id symbol gene type direction distance location
CI01000001_07544981_07548224 GPR157 coding upstream 8219 7544910 ~ 7548706 (+)
CI01000001_07531945_07539781 NA coding upstream 16360 7531541 ~ 7540586 (+)
CI01000001_07527533_07530601 NA coding upstream 25854 7527029 ~ 7531071 (+)
CI01000001_07421548_07447343 RAP1GAP coding upstream 109420 7421548 ~ 7447505 (+)
CI01000001_07405859_07406484 NA coding upstream 150236 7405144 ~ 7406689 (+)
CI01000001_07577777_07584809 ENO1, ENO1A, ENOA coding downstream 13059 7577725 ~ 7584809 (+)
CI01000001_07678904_07760870 RERE, REREA coding downstream 114238 7678904 ~ 7760870 (+)
CI01000001_07811962_07871073 SAMD11 coding downstream 247296 7811962 ~ 7871073 (+)
CI01000001_07908382_07926320 KLHL17 coding downstream 343716 7908382 ~ 7926477 (+)
CI01000001_07935720_07951221 PLEKHN1 coding downstream 371054 7935720 ~ 7951909 (+)
G16997 NA non-coding upstream 50044 7505945 ~ 7506881 (+)
G16961 NA non-coding upstream 64814 7461128 ~ 7492111 (+)
G16978 NA non-coding upstream 126858 7429190 ~ 7430067 (+)
G17061 NA non-coding upstream 233310 7323286 ~ 7323615 (+)
G17116 NA non-coding downstream 10846 7575512 ~ 7575845 (+)
G17106 NA non-coding downstream 33315 7597981 ~ 7696043 (+)
G17137 NA non-coding downstream 227538 7792204 ~ 7792612 (+)
G17103 NA non-coding downstream 309543 7874209 ~ 7906024 (+)
G17177 NA non-coding downstream 398111 7962777 ~ 7963902 (+)
G15995 NA other upstream 1841974 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 2266969 5279837 ~ 5287698 (+)
G15794 NA other upstream 2492221 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 3935474 3618075 ~ 3621451 (+)
G17234 NA other downstream 467458 8032124 ~ 8032483 (+)
G17353 NA other downstream 1651356 9216022 ~ 9228859 (+)
G17354 NA other downstream 1669797 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 1853662 9435836 ~ 9436373 (+)
G18896 NA other downstream 2675234 10239900 ~ 10241492 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location