G142540 (abhd10a,LOC107719764,LOC107662095,LOC107560335)


Basic Information

Item Value
gene id G142540
gene name abhd10a,LOC107719764,LOC107662095,LOC107560335
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 27375209 ~ 27377527 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210596
ccagtttaataataaaaagatttttatatacGACATAGATTTATACATATTGAAGAACATGACAtgatacattttacactttataacaTTTGAAACGTTTAATATGAGCTAACAGAAACTGGGTAGGCCTACAAGTGagacgataaaaaaaaaaaaaaaaaaaacatttaatgcggacaaaaaagaaaagtggtAATACTTGTGGTAATGGGAACATTTGTACTTCCCCAAAAAATGTACGCAGAAGAATCACCATCagactaaaacaacatttggcTCAAAAATATAGTTGAAATGTAGACAATGACATCTGTATTATTGTTCTGTGGCTGCATCCTTGAGCCAGTGCATAAAGAAAAACCAAGTTCTCAAACAAAGTCataggaagaaaagaaaaaccacCACCACCACAGTGAATATGCAGCTAATTCAATCCCTACTTATATTAGCAGCACCTTTTAGCCATTCCTGCAAGTAAAAATGCCTGcagtgatttcttttttttttttttttttcaaatacacaCATAGAAATATACTAATAAAGGACAGAATTACACCGAGTGACATGTCTTGGCCTTATTTTGGTCTACCTTTCTTCTACGCTAAAATCTAACATTTTCTTTGTCCAAGATTGCTCATAATCTTGGTCTGAGTAAGCAGCTCCCAATAAAGTCTGCCTACCGTCCTTATAAAATGCGTATAGAGTTTTCGACTATGCTCTTCAGATGCGTATCCCCGTGTATGTAGTGCTAAACACAACAGCTACCCAACCTTAACCAACTCAAAGAAGGAAATGTTACAAAAAGGCCGTACGTGACACAGCATTACAACGTAACAGGAAACAATAGCAGAAAATAACTAATACAAGGCAAGTTGGATGTAGAGTTTTCATTACCGTGGCCTTGTTGCCTTGCTCTTAAATGCTTCTGTATATTCAAACTTGGCACAATGTATTTCGTCATATTTGGGAGCTACCGCAGAAGGCAAGCTTTTCAGAGAATCACTATTTAAACGAACAGTTCGCCAAAATTGTAACTTTTGCTGAATATTACTGATCCCCAGGGCATCCGAGACGTAGAACGGTTTGTTTCTTCCTCAGAACGGATTTGGAAAACTgtatctgcagtgaatgggtgccgtcaaaacgAGAACCAAACAGCTGagcaaaacatcacaataaatcaCAAGAACTCCGGTCCATCAGCGAACATCTTGTGAcgccaaaataaacaaacatacccACCATAAACACATTTCAACTTCAAAATACAAGTTTGAAAGTccaagttattatttaaaatacacagatatttattttgaactattGTTAATGGAAAACGGCGTTTGACCTGTGCATATTTACTACAGAAAGCAATAttctggattaaaaaaaaaacacaaaacgcTTATCTGAAGACAGGATGTTAATCGATTGACTGTATTGGtgtgattattgtttttatccGAAGTTTGAACTCGTTCTGACGGCTctcattcgctgcagaggagcAAATGATGCAACTTAATTCTCCAGAAATGTTCAGGTGAAGAATCAAACACATTCTGGCTGGCCTAAAATTAGGTCAATTCTCagcaaattacaatttttggatgaactgttcttttaaattctgGCCTGTCCCTTTTACAATGCTATTGTACGACTTCACGTCACTAGAGAAGGAATATAGTGCCAGCACCTGGACATCACTCAGTCATATGGCTCTGGAAAGAAACACTGATTTTTGGCGATTCTCAATTCATTTGGCTTTGTTCGCTTTAAAAGCCTAACCTCCAACCGTGATACCTGTACTTTCCCATCTCAACTAGTCCGTCTTTCACACCTGTTCTCACCCCAGTGTGGTCAATTTATCTATAAGGTCATCGATAGTGTACACCATGAGCTTAATGTCATCTTTCTCTGACATGCGATGTTGCCCGTGTTTGCGTAGAATGACATCTACGTCATTGCTGAGTACTCGCTCTGCGACCTGCATGGAGACGTGCCAGGGAACGTCCGAGTCCTTGAGCCCGTGAATCAGACGGACAGGGCAGGAAACAGGGATGGGGCTGTGGAGGATGCAGTGGTTCTCCGCCTCCTTCACAAAGTCCACGCTAAGAGTGTAGAAACCCTCTTCATTGTGCTTGGTTGGGAATTTCCAAAAGCCCTGTTCCTCTATCTCCT

Function

symbol description
abhd10a Predicted to enable hydrolase activity, hydrolyzing O-glycosyl compounds and palmitoyl-(protein) hydrolase activity. Predicted to be involved in protein depalmitoylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Orthologous to human ABHD10 (abhydrolase domain containing 10, depalmitoylase).

NR:

description
abhydrolase domain containing 10a isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210596 True 2187 lncRNA 0.39 2 27375209 27377527

Neighbor

gene id symbol gene type direction distance location
mtif3 LOC107719760,LOC107662074,LOC107560337,LOC107702912,LOC107576280 coding downstream 36110 27336495 ~ 27339099 (-)
LOC122325133 LOC107560346,LOC107740038,LOC107662093 coding downstream 227164 27146476 ~ 27148045 (-)
her7 LOC107548512,LOC107662101,LOC107740036,LOC107556023,LOC107722746,LOC107702916 coding downstream 426314 26947330 ~ 26948895 (-)
ganaba zgc:171967,LOC107662060,LOC107702959,LOC107722752,LOC107548499,LOC108427707 coding downstream 434925 26926233 ~ 26940284 (-)
trnas-gcu_32 NA coding downstream 760479 26614643 ~ 26614730 (-)
zgc:152816 LOC107719757,LOC107662076,LOC107560316,LOC107702950,LOC107573841,LOC107752252 coding upstream 9763 27387290 ~ 27404395 (-)
zgc:175280 zgc:175280,LOC107719755,LOC107702889,LOC107557764,LOC108430433 coding upstream 31975 27409502 ~ 27418420 (-)
LOC122325363 slc25a5,LOC107378486,LOC108430428,LOC106515500 coding upstream 196336 27573863 ~ 27577372 (-)
LOC122325076 ebf2,LOC107712533,LOC107560327,LOC107683778,LOC107557760 coding upstream 208104 27585631 ~ 27602190 (-)
G142529 NA non-coding downstream 41493 27333297 ~ 27333716 (-)
G142515 NA non-coding downstream 76333 27215632 ~ 27298876 (-)
G142521 NA non-coding downstream 93768 27278920 ~ 27281441 (-)
G142520 slc25a11,LOC107560342,LOC107702890,LOC107752240,LOC107557769 non-coding downstream 99020 27275371 ~ 27276189 (-)
G142464 NA non-coding downstream 281513 27040225 ~ 27093696 (-)
G142586 NA non-coding upstream 68949 27446476 ~ 27451221 (-)
G142606 NA non-coding upstream 77166 27454693 ~ 27454892 (-)
G142590 LOC107662078,LOC107560333,LOC107719753 non-coding upstream 94257 27471784 ~ 27474801 (-)
G142614 NA non-coding upstream 98083 27475610 ~ 27476044 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other downstream 117727 27229803 ~ 27257482 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other downstream 450222 26922815 ~ 26924987 (-)
rps29 NA other downstream 814822 26483321 ~ 26560387 (-)
G142278 NA other downstream 1140964 26232024 ~ 26234245 (-)
G142281 NA other downstream 1187290 26185660 ~ 26187919 (-)
tex55 LOC107560331,LOC107702887 other upstream 98567 27476094 ~ 27478227 (-)

Expression


Co-expression Network