CI01000001_10783090_10786991


Basic Information

Item Value
gene id CI01000001_10783090_10786991
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10782850 ~ 10786991 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10783090_10786991.mRNA
GAAATAGTGTGCGGCCACCTACAGCAGCCGAAACCTCTGTTAAAGGCAGTTCTCCTGATTGCCTGCCATCTCTACAGCTGCCTAATGAAGGCTGGGATCTGTGCTTGCTTTGGAAATGAGTTTTCCCTTGAAAACGGCGTAAGCTGTATCCAGGTCTATTTAAATGAGCAGACTAAAGCAATGCATCTGCTGGGACAAAGGTCGATTGTTATGCGACTAGAGGCACAGGGGAACGCGCCATACTACGCGCAGCACAACGCTGTGGGTCAGAACTTCCCCAGCTTCCTTCAGAACGCTTCAGGAAGACCTCACCTGCCCGGCGGGCACGTTGAGGACGGCCAGCAGTGGTGGAGTCTCCCTCAGAGTAGCAGCGCACCCTCCAGTCACCCCTTCTCTCTGGGACGGCAGCTGGTTTTGGGCCACCAGCCTCAAATTGCTGCACTTCTGCAGGGCACCTCAAAGGGTCTGTTGAGCTCAACTCGTCGCTGTCGCAGGTGCAAATGCCCTAACTGCCAATCATCGGGAAACGGAGGTGCTGCTCTGGAGTTCGGGAAGAAAAGACTACACATTTGTCACATTCCAGATTGTGGCAAGGTTTACAAAAAAACCTCTCACCTGAAGGCGCACCTGCGCTGGCACGCCGGCGAGCGCCCCTTCATCTGCAACTGGCTCTTCTGCGGGAAGAGCTTCACACGCTCAGATGAGCTGCAGAGGCATCTCCGTACACACACCGGGGAGAAGCGTTTCGGCTGTCAGCAGTGTGGGAAAAGGTTTATGCGGAGCGATCATCTCTCCAAGCACGTGAAGACCCATCAGAGCAGGAAGAGCCGGTCCAGTCAGCCCGCTCACAGTGGGACTGATGCACTGCTCAGCAACATCAAGAGAGAGTAAAGGATGCAAAATGCAAAAGAACTCAATATAGTATCCGGAATGAGACCGGAGACCTTACAAGGACATTTGTGTCATCTAACAGATATTCCAAAAAGCAATAGGAGCATGGGCCTGTTTCCATTGTACTTTTTTTTTTTTTAAACACTGGCGCGAATGCACACCATGCTGCACCGATCTTTGAGACTTTGAAGAGACTTATGGTCACAGCAGAAGTTCTCTCGTTGTGATATATCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10783090_10786991.mRNA True 1131 mRNA 0.52 3 10782850 10786991

Neighbor

gene id symbol gene type direction distance location
CI01000001_10676846_10683262 ANKRD33AA coding downstream 98806 10676522 ~ 10684044 (-)
CI01000001_10658398_10672912 ACVRL1 coding downstream 109373 10658392 ~ 10673477 (-)
CI01000001_10638148_10656332 ACV1B, ACVR1BA, ACVR1BB, ACVR1B coding downstream 126146 10638100 ~ 10657269 (-)
CI01000001_10556067_10557569 DNAJC22 coding downstream 224315 10556004 ~ 10558535 (-)
CI01000001_10542497_10550979 IKZF4 coding downstream 231871 10540670 ~ 10550979 (-)
CI01000001_10798413_10798703 NA coding upstream 11338 10798329 ~ 10798933 (-)
CI01000001_10822800_10843434 NA coding upstream 35689 10822680 ~ 10843434 (-)
CI01000001_10862471_10864514 NA coding upstream 75333 10862225 ~ 10865770 (-)
CI01000001_10896443_10925951 ZNF385A coding upstream 109217 10896208 ~ 10925951 (-)
CI01000001_10983526_10986681 NA coding upstream 195192 10982183 ~ 10986911 (-)
G20180 NA non-coding downstream 1832 10779120 ~ 10781018 (-)
G20183 NA non-coding downstream 6382 10773208 ~ 10776468 (-)
G20168 NA non-coding downstream 196845 10585802 ~ 10586005 (-)
G20237 NA non-coding upstream 35056 10822047 ~ 10834168 (-)
G20268 NA non-coding upstream 86965 10873956 ~ 10874264 (-)
G20286 NA non-coding upstream 88124 10875115 ~ 11303893 (-)
G20247 NA non-coding upstream 133483 10920474 ~ 10928405 (-)
G20292 NA non-coding upstream 202303 10989294 ~ 10992998 (-)
G20136 NA other downstream 243000 10539027 ~ 10539850 (-)
CI01000001_09804494_09811219 NA other downstream 961954 9804429 ~ 9811219 (-)
G18223 NA other downstream 2854333 7926104 ~ 7928517 (-)
G18023 NA other downstream 3025330 7756501 ~ 7757520 (-)
G17911 NA other downstream 3529596 7251311 ~ 7267952 (-)
G20230 NA other upstream 235136 11022127 ~ 11028777 (-)
G20319 NA other upstream 323846 11110837 ~ 11114747 (-)
G20315 NA other upstream 333161 11116755 ~ 11120830 (-)
CI01000001_12878462_12899012 NA other upstream 2086407 12878365 ~ 12899469 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022421 sp5l coding NC_007134.7 CM002907.2 28023091 ~ 28025943 (-)