G20247



Basic Information


Item Value
gene id G20247
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10920474 ~ 10928405 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU22748
CTTCGTTCATCTTCTGAACACAAATTAAGATATTTTTTGATAAAATCCGATGGCTCAGTGAGGCCTGCATTGACAGCAAGATAATTAACACTTTCAATGCCCAGAAAGCTACTAAAAACATATTCAAAACAGTTCATGTGACTACAGTGGTTCAACCTTAATTTTATAAAGCGACGAGAATACTTTTTGTGCACCAAAAACAACAAAATAGCGACTTTATTTCACAATATCTAGTCATGGACGATTTCAAAACACTGCTTCATGAAGCTTCGAAGCTTTACGAATCTTTTGTTTTGAATCAGTGGTTTGGAGCGTGAATCAAACTGCCAAAGTCACATAAACTCCCCCAAGAACACGCGACAAAGGGGGTGAGGCCATGTTGGGCTGCTATAGAGAAGAGGAAGAGTTGTTGTAGTAGAGTGTTGTTGACATGCCGTCATTTTACGCCGGACTGCTTCACAAACGAGGGTCAATCCAACGTTGGATTAAAGGGTCAGTTCACCCAAAAGTGAAAATTCTGTCATTAATTACTCATGTCGTTCCACACCCCTAAGACCTTCATTCATCTTCAGAACACAAATTAAGATATTTTTGATAAAAATCTGATGGCTCAGTGAGGCTTCTATTGACAGCAAAATATTTAACACTTTCAGATGCCCATAAAGCTACTAAAGACATATTTAAATCAGTTCATGTGACTACAGTGGTTCAACCTTAATGTTATGAAGCGACAAGAATACTTTTTGTGCGCCAAAAAACAAAATAACGACTTTATTCAACAATATCTAGTGATGCTGATTTCTAAACACTGCTTCGTGAAGCTTCGAAGCTTAACTAATCATTTGTTTCGAATCAGTAGTTTGGAGCGTGAATCAAACTGCCAAAGTCACGTGAACTACTGAAGTTTCAAAACACTTATGACGTAACGAAGCCTCGTTTACTGAAATCATGGGATTTTGGCGCTCTGAACCACTGATTCGAAACAAATGATTCGTAAAGCTTCATGAAGCAGTGTTTTGAAATCACCCATCACTAGATATTGTGGAATAAAGTCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU22748 True 1055 lncRNA 0.28 2 10920474 10928405

Neighbor


gene id symbol gene type direction distance location
CI01000001_10862471_10864514 NA coding downstream 54704 10862225 ~ 10865770 (-)
CI01000001_10822800_10843434 NA coding downstream 77040 10822680 ~ 10843434 (-)
CI01000001_10798413_10798703 NA coding downstream 121541 10798329 ~ 10798933 (-)
CI01000001_10783090_10786991 NA coding downstream 133483 10782850 ~ 10786991 (-)
CI01000001_10676846_10683262 ANKRD33AA coding downstream 236430 10676522 ~ 10684044 (-)
CI01000001_10983526_10986681 NA coding upstream 53778 10982183 ~ 10986911 (-)
CI01000001_11004027_11004884 NEUROD4 coding upstream 75209 11003614 ~ 11005633 (-)
CI01000001_11034064_11048961 C1QL4.L, C1QL4, C1QL4A, C1QL4B coding upstream 105458 11033863 ~ 11048961 (-)
CI01000001_11089521_11092848 NA coding upstream 161015 11089420 ~ 11093631 (-)
CI01000001_11210296_11213607 NA coding upstream 281819 11210224 ~ 11213607 (-)
G20268 NA non-coding downstream 46210 10873956 ~ 10874264 (-)
G20237 NA non-coding downstream 86306 10822047 ~ 10834168 (-)
G20180 NA non-coding downstream 139456 10779120 ~ 10781018 (-)
G20183 NA non-coding downstream 144006 10773208 ~ 10776468 (-)
G20292 NA non-coding upstream 60889 10989294 ~ 10992998 (-)
G20230 NA non-coding upstream 96145 11022127 ~ 11028777 (-)
G20322 NA non-coding upstream 171149 11099554 ~ 11101587 (-)
G20341 NA non-coding upstream 183201 11111606 ~ 11182833 (-)
G20315 NA non-coding upstream 188350 11116755 ~ 11120830 (-)
G20136 NA other downstream 380624 10539027 ~ 10539850 (-)
CI01000001_09804494_09811219 NA other downstream 1099578 9804429 ~ 9811219 (-)
G18223 NA other downstream 2991957 7926104 ~ 7928517 (-)
G18023 NA other downstream 3162954 7756501 ~ 7757520 (-)
G20319 NA other upstream 182432 11110837 ~ 11114747 (-)
CI01000001_12878462_12899012 NA other upstream 1944993 12878365 ~ 12899469 (-)
CI01000001_12921289_12924608 NA other upstream 1992194 12920599 ~ 12925496 (-)

Expression



Co-expression Network