CI01000001_10798413_10798703


Basic Information

Item Value
gene id CI01000001_10798413_10798703
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10798329 ~ 10798933 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10798413_10798703.mRNA
ACTTTCACTTTTATCATATCTTAGTGATGTATACCAATAATGGGAAAAATGTATACTTTTTAGTGTAAATTGTATGATGTTTCCTGACAGAAGTTTCTAATATGAATTAACATGTCTCCTTGTCTGTGTCGGGGGCCAAAACACGCAAGATGCCCAATAACTGTTCCTCCTGCTCTCCCTGCACCCACCCTTCACCTTCACCTCTCTGTTTCCAGCATCAAAGGGCAGTCATGGCTCCAGCTGGGTGGCCACCGACCTCTTATTTCCTCCCACATGCTCTCCTGCCATTCATTCTGATCCAGGCCCCGTCAGGGCTGAGCAGACCCATGGGATCCGACCAACGGGACCGCTCATGGCCACTTCCTGGTCATTTAAGACCTGTGCCGCAGAATGGAGGGCCATTGTCCAGACTGTTATCTGATGGCCCGAGCCAAAAGGCAGACAAAGCCAAGTGCCTGGAGACTCACCCCTTCCGCTTTGCTGAGGAGACAGTGCTTTTTTTAAAGCATGGTAATGATTAAAAAGAGGTGAATGAAACTGAAATATCATCAATGAAACAAACATCACCAGTTTTAAATGCGTATAACTAATGATGATAAATTAAA

Function

NR:

description
hypothetical protein cypCar_00005630

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10798413_10798703.mRNA True 605 mRNA 0.45 1 10798329 10798933

Neighbor

gene id symbol gene type direction distance location
CI01000001_10783090_10786991 NA coding downstream 11338 10782850 ~ 10786991 (-)
CI01000001_10676846_10683262 ANKRD33AA coding downstream 114285 10676522 ~ 10684044 (-)
CI01000001_10658398_10672912 ACVRL1 coding downstream 124852 10658392 ~ 10673477 (-)
CI01000001_10638148_10656332 ACV1B, ACVR1BA, ACVR1BB, ACVR1B coding downstream 141625 10638100 ~ 10657269 (-)
CI01000001_10556067_10557569 DNAJC22 coding downstream 239794 10556004 ~ 10558535 (-)
CI01000001_10822800_10843434 NA coding upstream 23747 10822680 ~ 10843434 (-)
CI01000001_10862471_10864514 NA coding upstream 63391 10862225 ~ 10865770 (-)
CI01000001_10896443_10925951 ZNF385A coding upstream 97275 10896208 ~ 10925951 (-)
CI01000001_10983526_10986681 NA coding upstream 183250 10982183 ~ 10986911 (-)
CI01000001_11004027_11004884 NEUROD4 coding upstream 204681 11003614 ~ 11005633 (-)
G20180 NA non-coding downstream 17311 10779120 ~ 10781018 (-)
G20183 NA non-coding downstream 21861 10773208 ~ 10776468 (-)
G20168 NA non-coding downstream 212324 10585802 ~ 10586005 (-)
G20237 NA non-coding upstream 23114 10822047 ~ 10834168 (-)
G20268 NA non-coding upstream 75023 10873956 ~ 10874264 (-)
G20286 NA non-coding upstream 76182 10875115 ~ 11303893 (-)
G20247 NA non-coding upstream 121541 10920474 ~ 10928405 (-)
G20292 NA non-coding upstream 190361 10989294 ~ 10992998 (-)
G20136 NA other downstream 258479 10539027 ~ 10539850 (-)
CI01000001_09804494_09811219 NA other downstream 977433 9804429 ~ 9811219 (-)
G18223 NA other downstream 2869812 7926104 ~ 7928517 (-)
G18023 NA other downstream 3040809 7756501 ~ 7757520 (-)
G17911 NA other downstream 3545075 7251311 ~ 7267952 (-)
G20230 NA other upstream 223194 11022127 ~ 11028777 (-)
G20319 NA other upstream 311904 11110837 ~ 11114747 (-)
G20315 NA other upstream 321219 11116755 ~ 11120830 (-)
CI01000001_12878462_12899012 NA other upstream 2074465 12878365 ~ 12899469 (-)

Expression


Co-expression Network