cdc23 (cdc23,LOC107692994,LOC100380698,LOC107668434)


Basic Information

Item Value
gene id cdc23
gene name cdc23,LOC107692994,LOC100380698,LOC107668434
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 18575504 ~ 18585441 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221396.1
CGTCGGCGTGACGTATTTATGAAAAATGGCGGCTACCCGCAGCAGTGAGTTCGGCGACTTGgttcaaattaaaaaacaacttatttCTATTATAGCGCAGTGTAAGGAAAGAGGACTCGTCCACAGTGTGAAATGggcGTCTGAGCTGGCCTTCTCTTTGGATCCGCTTCCTCTGAACGAGATCCCTGCGGCGCCGGAGCTCACTGAGGAGGACGCCCGAGATTTGGATGCCCTGTGTTTGGCCAAATCATATTTTGACCTGAAGGAATATGATCGAGCTGCTTATTTCCTCCGAGGCTGCCGCAGTCAGAAAGCGTATTTTCTGTATATGTATTCACGCTACCTAtcaggagaaaagaagaaagatgaCGAGACCGTCGACAGCCTGGGGCCTTTGGAAAAAGGTCAGGTCCGAAACGAAGCCCTGCGAGAGCTCCGGGTGGAGCTGAGCAAGAGACACAGCGCCGGAGAGCTGGACGGGTTTGCACTATATCTGTACGGCGTGGTCCTGCGGAAGCTGGATCTGCTGAAGGAGGCGGTGGAGATCTTCGTGGCAGCGACTCACGCTCTTCCTCTGCACTGGGGCTCGTGGCTGGAGCTCTGCAATCTCATCACCAACATCGAGATGCTGAAGTCTCTGTCTCTGCCGGACTGCTGGGTGAGGGACTTCTTCATGGCACACATGTACACCGAGCTGCAGATGATCAAAGAGGCGCTGCAGAAGTACCAGAGCCTCATGGAAGCAGGCTTCGCCAAAAGCACGTACATCATCTCCCAGATCGCCGTGGCTTACCACAACATACGAGATATCGATCAAGCCTTATACCTGTTCAATGAACTCCGGGAGCAGGATCCTTTCCGAATTGAGAACATGGACACCTTCTCCAACCTGCTTTACGTGCGGAGCATGAAGCCGGAGCTCAGTTACCTGGCTCACAATCTGGTGGAGATCGATAAGTACCGGGTGGAGACGTGCTGCGTGATCGGTAACTACTACAGCCTGCGCTCTCAGCACGAGAAGGCGGCCCTGTATTTCCAGCGGGCCCTGAAGCTGAACCCACGCTGTCTGGGGGCCTGGACCCTGATGGGTCACGAGTACATGGAGATGAAGAACACCTCCGCCGCCATCCAGGCCTACAGACACGCCATAGAAGTGAACAAGCGGGACTACCGGGCCTGGTACGGACTCGGGCAGACCTACGAGATCCTCAAGATGCCCTTCTACTCGCTCTACTACTACAGGAAAGCTCATCAGCTCAGgcccAATGACTCTCGAATGCTCGTGGCTCTCGGGGAGTGTTACGAGAAACTCTCTCAGCAGGTGGAGGCCAAAAAGTGTTACTGGAGAGCGTACTCGGTCGGAGACGTGGAGAGAATGGCTCTTCTGAAGCTGGCCAAgCTTCACGAGCAGCTGAATGAATCTGATGACGCTGCACAGTGCTACATCATCTACATCCAGGACATTTTCTCGTGTGGTGAGCAGCTGGAGCACGCCGAGGTCAGCACGGCTCTGAGGTATCTGGGTCAGTACTACTTCAAGAACAAGCTGTATGACGAGGCGTCTCTCTGCGCTCAGCGCTGCTGTGATTATAACGACGCGCGGGAGGAAGGCAAGGCGCTGTTGAGGCAGATCTCTGCGGTTCGAGAGCAAGGAGAGCCTTCATCCACAGACCTGAGCCTGCCCTGCGTCTTCAACCCGCTGCCCAACAACACCACACCCGTCAGGAGAGTGTCTCCACTCGACCTGTCCTCCGTCAcgccctgacacacacacacacacacacacacacactctgtaaATAACCGCGTACAGACGGCCCTGCCTGCCACAGCAAATAAACGCATCAAACACTGA

Function

symbol description
cdc23 Predicted to be involved in cell division; cellular protein metabolic process; and regulation of mitotic sister chromatid separation. Predicted to act upstream of or within regulation of mitotic metaphase/anaphase transition. Predicted to be part of anaphase-promoting complex. Predicted to be active in cytoplasm. Orthologous to human CDC23 (cell division cycle 23).

NR:

description
PREDICTED: cell division cycle protein 23 homolog

GO:

id name namespace
GO:0030071 regulation of mitotic metaphase/anaphase transition biological_process
GO:0005680 anaphase-promoting complex cellular_component

KEGG:

id description
K03355 APC8, CDC23; anaphase-promoting complex subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221396.1 True 1855 mRNA 0.55 17 18575504 18585441

Neighbor

gene id symbol gene type direction distance location
si:dkey-71d15.2 LOC107757853,LOC107603213 coding downstream 10540 18560352 ~ 18564964 (-)
tmprss15 tmprss15 coding downstream 25590 18534673 ~ 18549914 (-)
poglut3 kdelc2 coding downstream 40941 18497839 ~ 18534563 (-)
LOC122326768 LOC107661674,LOC107692986,LOC103038806,LOC108413784,LOC106567507,LOC105011225 coding downstream 242714 18263530 ~ 18332790 (-)
LOC122326376 LOC107603239,LOC107742469 coding downstream 474994 18090879 ~ 18100510 (-)
wdr55 wdr55 coding upstream 6098 18591539 ~ 18595705 (-)
faxdc2 faxdc2,LOC107668437,LOC107713607,LOC107574044 coding upstream 32169 18617610 ~ 18623318 (-)
LOC122326130 LOC107668457 coding upstream 116580 18702021 ~ 18705085 (-)
sap30l sp30l,sap30l,LOC106603970,LOC105890504 coding upstream 145553 18730994 ~ 18735413 (-)
LOC122326397 LOC107575763 coding upstream 165919 18751360 ~ 18918475 (-)
G147671 NA non-coding downstream 167054 18331161 ~ 18408450 (-)
G147520 NA non-coding downstream 507561 18066280 ~ 18067943 (-)
G147496 NA non-coding downstream 692490 17878662 ~ 17883014 (-)
G147474 NA non-coding downstream 897524 17676923 ~ 17677980 (-)
G147478 dpysl3,LOC107661764,LOC107742441,LOC107603222,LOC107713594,LOC107692982,LOC107562900 non-coding downstream 987130 17585068 ~ 17588374 (-)
G147714 NA non-coding upstream 10644 18596085 ~ 18597397 (-)
G147718 larp1,LOC107757874,LOC107668436,LOC107571607,LOC107713603 non-coding upstream 18767 18604208 ~ 18605161 (-)
G147741 ddx46,LOC107668438,LOC107713612,LOC107571605,LOC107757870 non-coding upstream 125211 18710652 ~ 18712050 (-)
G147765 NA non-coding upstream 252390 18837831 ~ 18905662 (-)
G147767 NA non-coding upstream 259555 18844996 ~ 18846410 (-)
rbm11 LOC107572385 other downstream 22503 18549531 ~ 18553001 (-)
G147673 gabrg2,LOC107661671,LOC107692990,LOC107603256 other downstream 106653 18357568 ~ 18468851 (-)
G147531 NA other downstream 404920 18170080 ~ 18170584 (-)
G147526 LOC107661679,LOC107728278,LOC107562904 other downstream 447505 18126229 ~ 18127999 (-)
LOC122326388 stk10,LOC107661763,LOC107692983,LOC107742442 other downstream 645343 17889232 ~ 17930161 (-)
G147728 NA other upstream 114181 18699622 ~ 18701062 (-)
G147740 LOC107603250,LOC107668458,LOC107757873 other upstream 122263 18707704 ~ 18709602 (-)
G147749 galnt10,LOC107570436,LOC107668461,LOC107603248,LOC107657196 other upstream 150581 18736022 ~ 18904473 (-)
G147751 NA other upstream 157743 18743184 ~ 18745138 (-)
acsl6 acsl6,LOC107757868,LOC107668460,LOC107713587,LOC107657193,LOC107757859,LOC107657197,LOC107603236,LOC107570439,LOC107713593 other upstream 338307 18923748 ~ 18951882 (-)

Expression


Co-expression Network