LOC122326130 (LOC107668457)


Basic Information

Item Value
gene id LOC122326130
gene name LOC107668457
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 18702021 ~ 18705085 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220815.1
CCTTTACCTCTTGAGTCCattgaaagaaaacatcaaCATCGACGTCCTCACGAATCATGCGCCGGGTCTGAAGTCTCTGGAATGGCCTCAGCACCGGACCGGCTCCTCGGGGTGGCGATCTGGCTGATTATCGCCGGACTCGTGCGTCTGTCAGACGGAGATGCGCTGGACGTCACCGGCCCGTCGGACCCGGAGCAGCCGGAGCAGCTGGCGGGAGAAGCGTGCTCCGAGGGCCGCTGCGAGCCCGAGCCCGAGCCGGAAGCGCCGCTGTCCGGAGAAACCCCGAGCCACAACCTCACCGAGACCAAGACCTTCAAAGTGAGCTGCGATCAGCGGAACATCAGCGGCGTCGAGCTCTTCTCGGTGCAGATACTCAACTCCTCTCAGGACCTGATGGAGCTCCTGAATGCTAACAGCTCCGAGTGCTCCTTGGTTCTCTTCTACACCACGTGGTGTCAGTTCTCGGCGAACCTCGCCCCTCACTTCAACGCCCTGCCGCGAgtctttcccagcatgcacttcCTGGCTCTGGACGCGTCCCAGCACAGCAGTCTCTCCACACGCTTCGGCACCGTGGCCGTCCCCAACATCCTGCTGTTTCAGGGAGCCAAGCCCATGGCCAGGTTCAACCAGACCGAGCGGACGCTGGAGACGCTCAGCTCCTTCATCACAAACCAGACAGGCTTTGAAGCCGGTCCGGATCCGTCTGTTCTGGAGGAAGACCGCTCCGGACCTCTTCCCCAGCGCTTCTCCAGAGGCATCGACTGGCTCTTCGTGTTCTCGGTGCTGTTTATATCCGGCTTCACGCTCTACGCCATCCTCTGCTCAGACAGCATCCGCTGGCTCATTCCAGGACAAGACCACGAGCATCAGGACTAGACTCAGATCTCACGCAGGAAATGAACCACTGTGAAGAATCTGCTCGTTCACTTCTGTTCTTCTGTCAGCTTTTACTGGACTTGgtttaaaacagcaaaagaccaattcaaatgcaaaactcGTGCCTGACGTACATAAACACGGCTCAGAATGAAAGTACAGGAGGTCGTGTGATCTTAATGTACTTGGAAGGAAGTAATGGATCCCCACAATCCTTTGCACTGACAGCAGGTCATTAAAAGAGCCAGTGCTAAACGACTCAGTgctacattttttgtaaatggaTGCTACCTGTactgcattaataaaaagtaagttaatataaa

Function

NR:

description
PREDICTED: thioredoxin domain-containing protein 15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220815.1 True 1205 mRNA 0.55 6 18702021 18705085

Neighbor

gene id symbol gene type direction distance location
faxdc2 faxdc2,LOC107668437,LOC107713607,LOC107574044 coding downstream 78703 18617610 ~ 18623318 (-)
wdr55 wdr55 coding downstream 106316 18591539 ~ 18595705 (-)
cdc23 cdc23,LOC107692994,LOC100380698,LOC107668434 coding downstream 116580 18575504 ~ 18585441 (-)
si:dkey-71d15.2 LOC107757853,LOC107603213 coding downstream 137057 18560352 ~ 18564964 (-)
tmprss15 tmprss15 coding downstream 152107 18534673 ~ 18549914 (-)
sap30l sp30l,sap30l,LOC106603970,LOC105890504 coding upstream 25909 18730994 ~ 18735413 (-)
LOC122326397 LOC107575763 coding upstream 46275 18751360 ~ 18918475 (-)
LOC122326419 NA coding upstream 112697 18817782 ~ 18819542 (-)
LOC122326420 pitx1,LOC107668456,LOC107692953,LOC107757861,LOC107713590 coding upstream 168279 18873364 ~ 18877504 (-)
LOC122326398 NA coding upstream 213416 18918501 ~ 18921281 (-)
G147718 larp1,LOC107757874,LOC107668436,LOC107571607,LOC107713603 non-coding downstream 96860 18604208 ~ 18605161 (-)
G147714 NA non-coding downstream 104624 18596085 ~ 18597397 (-)
G147671 NA non-coding downstream 293571 18331161 ~ 18408450 (-)
G147520 NA non-coding downstream 634078 18066280 ~ 18067943 (-)
G147496 NA non-coding downstream 819007 17878662 ~ 17883014 (-)
G147741 ddx46,LOC107668438,LOC107713612,LOC107571605,LOC107757870 non-coding upstream 5567 18710652 ~ 18712050 (-)
G147765 NA non-coding upstream 132746 18837831 ~ 18905662 (-)
G147767 NA non-coding upstream 139911 18844996 ~ 18846410 (-)
LOC122326191 NA non-coding upstream 249794 18954879 ~ 18972995 (-)
G147756 LOC107757865,LOC107603244,LOC107668443,LOC107713615,LOC107657200,LOC107570434 non-coding upstream 269684 18974769 ~ 18975527 (-)
G147728 NA other downstream 959 18699622 ~ 18701062 (-)
rbm11 LOC107572385 other downstream 149020 18549531 ~ 18553001 (-)
G147673 gabrg2,LOC107661671,LOC107692990,LOC107603256 other downstream 233170 18357568 ~ 18468851 (-)
G147531 NA other downstream 531437 18170080 ~ 18170584 (-)
G147526 LOC107661679,LOC107728278,LOC107562904 other downstream 574022 18126229 ~ 18127999 (-)
G147740 LOC107603250,LOC107668458,LOC107757873 other upstream 2619 18707704 ~ 18709602 (-)
G147749 galnt10,LOC107570436,LOC107668461,LOC107603248,LOC107657196 other upstream 30937 18736022 ~ 18904473 (-)
G147751 NA other upstream 38099 18743184 ~ 18745138 (-)
acsl6 acsl6,LOC107757868,LOC107668460,LOC107713587,LOC107657193,LOC107757859,LOC107657197,LOC107603236,LOC107570439,LOC107713593 other upstream 218663 18923748 ~ 18951882 (-)
G147810 NA other upstream 320437 19025522 ~ 19103650 (-)

Expression


Co-expression Network