znf76 (znf76,LOC107722821)


Basic Information

Item Value
gene id znf76
gene name znf76,LOC107722821
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 840559 ~ 846884 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223647.1
GTCTGATTCGTTTGAGCGCCGCCTGCCGGAGGAGCGAGCGTGTCGCGGTGCATGACGGGCCGCTGGCGGTGagctgTAGTGACGTGATGGAGGGTCTGGGTCTTCAGGCCGTGGCTCTGAGTGACGGATCCACTGCTTACATACAGCAGACCATCGGTGATGCTAATCTAATGGAGGGAAACACGGTTCAGCTGGAGGACGGGACCACGGCGTTCATTCAGCACGTCAGCGTCCAGCAGAAAGagtcGCTAGCGTTCGAGGATGGTCAGGCGGTGCAGCTGGAGGACGGGACCACGGCCTTCATTCACCACACACCTAAAGACGGCTTCGCCGGGGCCGTGGAGGCCGTTCAGCTGGAGGACGGCAGCACGGCGTACATCCACCACCAGACGGGCGGCGCTGTGGAGCTAAACGCCGAGGCCATCGCTACGCTGGAGAGCTACGCTAGCAAGCTGACGGGGTCAGAGGTCGAGGTCGACGAAAACATCGAGAACACAAATGTAGCGGAGCAGACCAGCATACAGCTGATGTTTGAGGGCAAGGTCTGGAGCTCTGGTAAAGTCCAGCAGGTCGGAGAGAAGAGTTTTCGCTGTGGACACGCAGGCTGTGGCCGATACTACACAACAGCACACCATCTGAAGGTGCACGAGCGCTCACACACAGGTGACCGTCCGTACCGATGCGAAGTGCCGTCCTGCGCCAAAGCCTTCGCCACCGGGTACGGGCTCAAGAGCCACCTGCGCACGCACACGGGCGAGAAACCCTACAAATGCCCTGAGGACATGTGCTACAAAGCCTTCAAGACCTCCGGAGACCTGCAGAAACACGTGCGCACGCACACCGGCGAGAAGCCGTTTAAGTGTCCGTTCGAGGGCTGCGGGCGCTCCTTCACCACCTCCAACATTCGTAAGGTTCATACGCGAACGCATACGGGCGAGCGGCCATACTTGTGTCCGGAGCCGTCCTGCGGAAGAGCCTTCGCCAGCGCAACCAACTACAAGAACCACATGAGGATACACACCGGTGAGAAGCCGTATCTGTGTACGGTTCCTGGCTGTGGCAAGAGTTTCACGGAGTACTCCAGTCTTTATAAGCATCACGTGGtgcacacacactgtaaaccGTACACCTGCAGTCATTGTGGGAAGACCTACAGACAGACGTCCACACTGGCCATGCACAAGCGCACCGCGCACGGAGACTTCGACACGGTGGAGGACGCCGATGCAGAGGTTTTCGAGGCGTCGCCACGGGACGCCGACCAGAGCGAATGTGACGCCAAAGTCACCATGGAAACCGACGACATCATCAGCTCACACCTGCAGGTGCTCGGCGCGGCCGTCACCATGGTGACCCAGGACGGAACCGCCGGCGGCCAGCAGGTCACCATGGTTACGGATGGCAAAGAGCTGCAGCCGGTTGCCATAGTAACGTCAAACGGCATCATGGCTGAAGTGAATGCGTCGCCGtaccagcaggtggcgctgcTAGCAACAGAGAACGGCACACAGATTGCAGTACAGCTAGAAGATCAGCAGACGTTAGAGGAGGCgatcaccatggcaacagcagCGATAGAGCACAGCGGGCTGACCTCAGATCAGTGAGGCTGAGAATCACGTCCAGAGAGGACGCCACGTTTTTAACGTTTAGCTCCTATGAGAAGACTTTCTGCAGTCTTaaagggtctttttttttttacctacttTGAGCCAGTAGAAGTGAAGCaagatggaaataaaaatgtatatttgttaataaacaaGCTTTATCCAGTAA

Function

symbol description
znf76 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Is expressed in eye; gut; hindbrain; midbrain hindbrain boundary; and trigeminal placode. Orthologous to human ZNF76 (zinc finger protein 76).

NR:

description
zinc finger protein 76

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K20828 ZNF143_76, STAF; zinc finger protein 143/76

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223647.1 True 1779 mRNA 0.57 14 840559 846884

Neighbor

gene id symbol gene type direction distance location
c22h6orf89 LOC107575232,LOC107671520,LOC107750683,LOC107698307,LOC107569747,LOC107723024,LOC107578153 coding upstream 799 834074 ~ 839760 (+)
gpr37l1a LOC107722870,LOC107671519,LOC107698308,LOC107569763,LOC107750705 coding upstream 15706 820399 ~ 824853 (+)
elf3 elf3,LOC107572362,LOC107569764,LOC107656900 coding upstream 38613 798808 ~ 801946 (+)
pth4 LOC107723108,LOC107750679 coding upstream 49412 788463 ~ 791147 (+)
usp49 usp49,LOC107722889,LOC107572367,LOC107656903,LOC107690537,LOC107569748 coding upstream 72022 761669 ~ 768537 (+)
LOC122327930 LOC107698305,LOC107575490,LOC107722797,LOC107750682,LOC107671569,LOC107576489 coding downstream 13445 860329 ~ 870764 (+)
cry3b cry1bb,LOC107570678,LOC107698304,LOC105900053,LOC107103492 coding downstream 33303 880187 ~ 891663 (+)
dennd2db dennd2db,LOC107698300,LOC107750687,LOC107570675,LOC107667626,LOC107572545,LOC107726521 coding downstream 59846 906730 ~ 914014 (+)
stk38b stk38b,stk38,LOC107667630,LOC105900354,LOC105016867 coding downstream 80013 926897 ~ 935512 (+)
def6b def6b,LOC107667628,LOC107750690,LOC107570683,LOC107698284 coding downstream 118365 965249 ~ 972710 (+)
LOC122328050 NA non-coding upstream 11444 825151 ~ 829115 (+)
G147984 NA non-coding upstream 90912 749048 ~ 749647 (+)
G147898 NA non-coding upstream 114313 724669 ~ 726246 (+)
G147982 NA non-coding upstream 117976 718919 ~ 722583 (+)
G147938 NA non-coding upstream 263178 559745 ~ 577381 (+)
G148002 NA non-coding downstream 45705 892589 ~ 893223 (+)
G148033 NA non-coding downstream 162506 1009390 ~ 1011636 (+)
G148219 NA non-coding downstream 203801 1050685 ~ 1050910 (+)
G148226 NA non-coding downstream 336636 1183520 ~ 1190524 (+)
LOC122328044 NA non-coding downstream 489234 1336118 ~ 1338916 (+)
G147888 LOC107732183,LOC107723096,LOC107572363,LOC107698292,LOC107750676,LOC107656899 other upstream 46553 791234 ~ 794006 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other upstream 89050 750279 ~ 751509 (+)
G147896 NA other upstream 113792 726400 ~ 726767 (+)
G147937 NA other upstream 180945 653880 ~ 659614 (+)
G147956 NA other upstream 217192 622483 ~ 623367 (+)
G148214 wdr77 other downstream 168895 1015779 ~ 1016667 (+)
G148233 LOC107571167,LOC107662825,LOC107663547 other downstream 278602 1125486 ~ 1127230 (+)
LOC122327965 NA other downstream 290833 1137717 ~ 1148802 (+)
G148222 NA other downstream 532407 1379291 ~ 1384847 (+)
LOC122328040 NA other downstream 775108 1621992 ~ 1880883 (+)

Expression


Co-expression Network