XLOC_006823 (si:dkeyp-77c8.5)


Basic Information

Item Value
gene id XLOC_006823
gene name si:dkeyp-77c8.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 37227050 ~ 37229245 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013125
CAGATTCGCATTACAGGGTCAGCTAAATAGAAATgaacaatgcatgctgggagatCATCCCTCAGAATCAGTCACTCCTACAGACCTGCAGAAACGACTGAGAGAATTAAAGTCTCTGTGGGACGAGACCGAATCTCTGTGGAAAGAGTATGAAACGATGTGTATGCAGTGTGTTCAGTACAATGAGCGAGCAGTTGAGCAGGACCGCATGGAGCTCACCGTCCGGTGGAGAGAGCAGAAGTCACAGTTACAGGGCAGGGTGGATTCGCTGGGAGCAGCTCTTGAGCTCATGGACTCCATTACGCTGAAGATTTCAGAAATTTCTGAAAAACTTGACAAGTTCATCAAAGAGCCCAAAGACATCAAGGGATATACACTAGCTAATCCTGCAATTTTGAGAGATGTGAAG

Function

symbol description
si:dkeyp-77c8.5 Predicted to enable actin filament binding activity. Predicted to be involved in nuclear migration. Predicted to be located in nuclear envelope. Predicted to be part of meiotic nuclear membrane microtubule tethering complex. Predicted to be active in cytoplasm and nuclear outer membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095514

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013125 True 409 mRNA 0.46 3 37227050 37229245

Neighbor

gene id symbol gene type direction distance location
XLOC_006822 si:dkeyp-77c8.4 coding downstream 16681 37208460 ~ 37210369 (-)
XLOC_006821 si:dkeyp-77c8.3 coding downstream 26930 37199298 ~ 37200120 (-)
XLOC_006820 si:dkeyp-77c8.2 coding downstream 37490 37186303 ~ 37189560 (-)
XLOC_006818 si:dkeyp-77c8.1 coding downstream 46235 37171976 ~ 37180815 (-)
XLOC_006819 AL845493.1 coding downstream 48334 37178602 ~ 37178716 (-)
XLOC_006824 syne2b coding upstream 19753 37248998 ~ 37254777 (-)
XLOC_006825 kcnh5b coding upstream 73330 37302575 ~ 37383625 (-)
XLOC_006826 ppp2r5eb coding upstream 192088 37421333 ~ 37465542 (-)
XLOC_006827 wdr89 coding upstream 239848 37469093 ~ 37474989 (-)
XLOC_006828 sgpp1 coding upstream 262559 37491804 ~ 37519817 (-)
XLOC_006471 BX537274.2 misc downstream 26962145 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 36400825 825904 ~ 826225 (-)
XLOC_006817 NA non-coding downstream 116514 37110212 ~ 37110536 (-)
XLOC_006815 NA non-coding downstream 214814 37009812 ~ 37012236 (-)
XLOC_006814 NA non-coding downstream 229290 36995633 ~ 36997760 (-)
XLOC_006804 BX927407.1 non-coding downstream 614891 36587770 ~ 36612159 (-)
XLOC_006829 NA non-coding upstream 298916 37528161 ~ 37535785 (-)
XLOC_006836 NA non-coding upstream 403381 37632626 ~ 37636598 (-)
XLOC_006842 NA non-coding upstream 961276 38190521 ~ 38195214 (-)
XLOC_006843 NA non-coding upstream 1383980 38613225 ~ 38619719 (-)
XLOC_006846 BX323574.1 non-coding upstream 1623892 38853137 ~ 38853252 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location