CI01000004_14951433_14957539


Basic Information

Item Value
gene id CI01000004_14951433_14957539
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14951176 ~ 14957841 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14951433_14957539.mRNA
CGATCCAAACATTGACTCATCAACACACGCCACCTGTGAAAACACCAAGCTATTTTCACAAGAATAAAGAGATGCACCAACTTGCACGTTTAACTGTAATGCGCCACACTTAATTCCAGCACAGTTGTGTGCGTCCTAAACCTACAATTTATCACATAAATGCCAGATAAACCTAATCACTATGCTAACATTTGCAGCTCCAATTGTGCCAAACACAGAAGCGTTAATTAATCTAATGTTCTTGCGGCAGACGCACACAGTCGCACATGCAGTCACGCTGTGGGAGTGATTTGTAAGGCACCATGTGGGGCTCTAATCTGCGGGTTGCAGCGGGATCTTTACAGCCTGCTCACGGGCCCGAGTGGCAGAAATTAGGCCCAAATTCAATCAGTCGTCCAGGCAGTCCTGGGCTTTTTCTGCAGGCCTCGTGGCGCCTTGGGACACGAGCTCCATCTGCACTAGGGACAGCGTTCGTATCTCTGTCGTATTTGGAAGCCGGAGCCCAAAGAAATAATGCCGAGCCAAACAGCTCCTATTTTTCGAGAATATACAGAGCAAGACACTGGAGAACTTATACGCGTCTGACTCGGTCGTCTGTGAAATTGATAAGCTACGAGAGATCGACCGAAATGTGCCGAGCCACAAACATGCATAAAACACTGTGGAACACAGAAGAGCATAGCAGGAGCCATATGCACCGCACTCAGATGAATCCGTCTGCCCAATTGCTGTTCCTGGTAATACACAATAAACAATATCAAAATGCATTTTTGCAAGAACAGGACGGGCAAGAATTGATCACACTCTTCCATTACTGGAGCAAACAGTGGGCAAGAGGGAGAGGAGGAGAGATGAAAGAACATCAATGCGAAGAAAATGTGCAAAGCCACAGAGAAGCACTGCCCGGCATAATGACTCAGCTACCGCGCAGGGACCAACAACTTTCTAAAGCATCTCAGACATTAAGCAGAGAGACGGGTTGCTCCTTGCCCAGTACTCTGGCTGTGGGCGCTGCCTGATACAATTAAAATGAGCCCACAGCGCCTGTGCGCAGACGCAGTGAGGTGCCTCGTACTACTGAAGTATCACATCAGTGTTGTAAGGCCGACCGGGCCCTAATCTACACTTTTTCAACAGCCGGCACACCATGCATAATTAACACACATTACTAATTCAAACCTAAAGTGGTTCCCATGTAATCTACTGCAGTTCACTTTAATTAAACACATGTACTCTTGAACGATCTGCAACTGTGTAATGCGTATGAATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14951433_14957539.mRNA True 1276 mRNA 0.47 4 14951176 14957841

Neighbor

gene id symbol gene type direction distance location
CI01000004_14897662_14906408 NA coding downstream 44750 14897250 ~ 14906426 (-)
CI01000004_14860344_14863053 NA coding downstream 87728 14860286 ~ 14863448 (-)
CI01000004_14846825_14850092 NA coding downstream 99645 14846785 ~ 14851531 (-)
CI01000004_14843132_14843640 NA coding downstream 107197 14842913 ~ 14843979 (-)
CI01000004_14832429_14839825 NA coding downstream 111157 14832151 ~ 14840019 (-)
CI01000004_14999971_15002640 SLITRK3B coding upstream 41434 14999275 ~ 15002640 (-)
CI01000004_15063428_15066310 NA coding upstream 105587 15063428 ~ 15066310 (-)
CI01000004_15068206_15086386 MAP1SB coding upstream 109914 15067755 ~ 15086519 (-)
CI01000004_15086759_15087492 NA coding upstream 128844 15086671 ~ 15087575 (-)
CI01000004_15159447_15160043 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding upstream 201567 15159408 ~ 15160043 (-)
G34558 NA non-coding downstream 29837 14921068 ~ 14921339 (-)
G34550 NA non-coding downstream 38440 14910081 ~ 14912736 (-)
G34470 NA non-coding downstream 57881 14889692 ~ 14893295 (-)
G34468 NA non-coding downstream 63120 14885825 ~ 14888056 (-)
G34474 NA non-coding downstream 112854 14837689 ~ 14838322 (-)
G34635 NA non-coding upstream 22501 14980342 ~ 14995039 (-)
G34661 NA non-coding upstream 72604 15030445 ~ 15030741 (-)
G34663 NA non-coding upstream 74150 15031991 ~ 15032373 (-)
G34664 NA non-coding upstream 80751 15038592 ~ 15038910 (-)
G34666 NA non-coding upstream 90871 15048712 ~ 15049140 (-)
CI01000004_14827536_14831360 NA other downstream 123053 14827496 ~ 14831526 (-)
CI01000004_14808034_14808645 NA other downstream 142647 14807938 ~ 14808969 (-)
CI01000004_14775109_14792782 NA other downstream 168520 14774282 ~ 14792784 (-)
CI01000004_14749034_14751685 NA other downstream 199457 14748304 ~ 14753596 (-)
G34632 NA other upstream 53520 15011361 ~ 15025221 (-)
G34668 NA other upstream 93335 15051176 ~ 15052775 (-)
G34718 NA other upstream 323175 15281016 ~ 15281649 (-)
G34633 NA other upstream 829545 15787386 ~ 15787897 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016633 NA non-coding NC_007113.7 CM002886.2 36747178 ~ 36826293 (-)