CI01000004_15186236_15193312


Basic Information

Item Value
gene id CI01000004_15186236_15193312
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15185939 ~ 15195460 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15186236_15193312.mRNA
ATATTACTAATTCAACACAAAAGCTTTCAGTGCTGCTAAAACCCCATGATGATAAAGGTATTAGTATAATTTAATCTTATTGGCAGCTGAGTTGATTTATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGAATGACATACTCTTGTGGCAATTATTAATGTCTGTTAAAATGTATTGCCTTCAGATGTTTAAAGGGCAATCAATGAAACTCCATCTTTGCTGAACTCACCCTACTACTTTTTTTGTTTTTTAGAAATACCATATACACTCTAAAAAATCTTGGGTTATTTTTTCTACCCAAGTCCTGAGTTGAGCCTTTTGGGTCATTTTTGCTTTATTTTTTAAGTGTTTGGGTAGTTTTTGTGTTACCCAGTTCCTGGGTCAGTCCTAACAACCCAAGGGTTGAGTTATTTATCGCGGGATTTTTGCGACATTTTCAGGAGAGAGCAGTGCAGCTCCATCAAATTGGCAGTAAAATACAGGTCTGTGTACGTTTTATTTTATCTATAAGTTCGTTATTGTGCTGTATATCGTTTAATTTTATGAAAAGCAACATACAGGGGCGCGATGTGAGTCACTAAAACGAGTGTCGCGTAGGTCTTTTCGCGTGATGAAAACGCGTGATGCCTTGCATAAAATTTTATGATTTTATTCAACAAGATACAGAATAACATATTTTAACATCCTAAGTATTTTTATCAGAATTGTACACTGATTATTTATGGACAGGTTATGGTGTCAGTCACAGCATTTTTCGGCTACGAGTGAAACGCAGGCGGCGGTCTGAAGTTATCAGTTCCCCCGCCGAACGCGAGCCATCTCCGGCACGAGATCCAGCGCCGTTACGGTGCAAACAGAGACTGGTCGATTAAACATTTAGAAGTAATTCAAGTGTATTTTTTTACTTCGGATATTTGTTAAACGAGCTTAAATGTAGGCAATATGTATTTATAACCATATAAAATATGCTATACTATAAATTATGATCGAAAATAAAGGAATTATCATGCAAATCAGTGGTTGTGTGGAGTATTTAAAAAAAGTTTAGAGGATTTAAGTTAATCCATAAACAATTAATGTATGATGTAAAAAATAATAAAATAAGCTAGTATAGTAAAAATGAATCAACCCATTATGCTGGGTTAAATAACCTTATTTGCTGGGTAAAATTAACCCAACATGTGTTCTGTCCTATATTTACCCAGCCCTTGGGCTATAAAATGTGTAAACGTTCAATCAAAATAGTAATGCAGCAGCTAAAAGGACAAACATTTCTTTAGGTACAACATAAAGTGAGTCCAGCACAGCTGTTGCAAATGAAGAAACTATCAACGAAGAGAAGAGTGCCCTCTCCTGGAGCATTTTAACAATGCCAGTCAGATGTGTTTGAAATAAACAGCTAAAGACCAGTGTATACTACTAGGCCATTTTATAAAACCCAGTTAGCATAGGTGATTTAAAATGAAAGATTAATAAAGATACTGACTTTTGATGTTGACATTATGTAGGATGATTTCATCGTACATAGCCCAGGTGTTTAGCATATCAGAGCCACGTGGTTCTCCTAAAGTTTTCAGAATGGTGGTTTTGAATTTATGAGTAAAATCAATAAAATTCAAAACGTCAATTTTGAAGAAGTGCGTTTTCAGTTGATAAGTGATGACTACACCCACCTAGTCTGAGGGAACCTATTGCGAATTAGCTTTGAGTTGGCCTAAAAATTCATGACTAAACAAATTTTAATTTAGAAATTAGAATAGTAGGAGGGAAATAGTAGGAGAGCACATTTTATTCTCCTGAAAAAAAAAACAAAGCCATACTTTCATTACTCTCCAACACGCCTCCTTCTTTCAATGCAACCGTGCTCTCAGTCAAACGCGCAGCTCCCCAGTCAGCATTTCAGCAGAATCGTGATCACCTGTAAGGGAGGTGGAATCATATATTTTATTAGATTCGATTGGTTGTCATAGAGTTTGTGCTCAGCGCCAGCCTGTTACGAGCCAGTCCCGTGCTGCCTCTGAGAGGGGACAAACTTTCCCCAAGTAGCCTATACTGATAGTTTGTTTGGCTTGGAAAACTGTTTACAATTCTGGTCCTGGTCAATACGGTCTGCTGTACTATAAATAAGGAGGGACAAAATGTTAAACGCTGTTACAGAACGTTACGACGCGTTTTTTAAGCAGAAGAACATTGTAACGGATTTTCTATCTGTTTTAGAGGAAAAAACTGGAGTTCAGAAACAGTACATTGCAACAGGTGCCGTGTCTATTGTGGCTCTCTATTTGATATTTGGATATGGTGCCTCTCTCCTCTGCAACTTGATTGGTTTCGCATACCCAGCGTATGCCTCCATCAAAGCCATCGAGAGTAACAATAAAGAAGATGACACCAAATGGCTAACATACTGGGTGGTTTATGGACTCTTTAGTGTGGCTGAATTTTTCTCTGATATCTTCCTCTTCTGGTTCCCCTTTTACTATGCTGGGAAGTGCCTGTTTCTGCTGTGGTGCATGGCTCCGGTCTCATGGAATGGCTCTCAGATCATATACACACGTGTGGTGAGACCTTTCTTCCTCAAGCATGAAGCAGTATTTGACAACGTTGTCAGCGATTTGAGTGGCAAGGCCAAGAGTGCAGCAATGGAAGGCTTGACATTGCTGAACAGTGATAAGAATAAATGATTCGAAGGTGGGGATATGAAGAATCATTTTACCAGGAGCCCTGTGTTTACATCCGTTTCATTTATTTAGTCATTAAAACCCACTGAAATTATTCATCTTTACTGCATCTGAGCCAGGCAGCGCACTCACCCCCAAAATGGTCCTTAAACGTTCTTACATTTCTCAAATGGTCCACAAATGTTCTTGGGATACTATTTAATTCAACTTCACGTTTCTGTTTTGTGTTCATCCTATATGTTATTTTAGCACTTTGACCAATGAAAGAAATGTTTAAGTCACTGTCTTTTAATGAATAAA

Function

NR:

description
Zgc:101744

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17279 REEP5_6; receptor expression-enhancing protein 5/6

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15186236_15193312.mRNA True 2988 mRNA 0.37 5 15185939 15195460

Neighbor

gene id symbol gene type direction distance location
CI01000004_15159447_15160043 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding downstream 25896 15159408 ~ 15160043 (-)
CI01000004_15086759_15087492 NA coding downstream 98406 15086671 ~ 15087575 (-)
CI01000004_15068206_15086386 MAP1SB coding downstream 99420 15067755 ~ 15086519 (-)
CI01000004_15063428_15066310 NA coding downstream 119629 15063428 ~ 15066310 (-)
CI01000004_14999971_15002640 SLITRK3B coding downstream 183299 14999275 ~ 15002640 (-)
CI01000004_15217903_15228632 NA coding upstream 22278 15217738 ~ 15228736 (-)
CI01000004_15255165_15256033 APODA.1 coding upstream 59483 15254943 ~ 15258227 (-)
CI01000004_15300222_15308848 NADK, NADKB coding upstream 104200 15299660 ~ 15308941 (-)
CI01000004_15326982_15360355 SKILA coding upstream 131399 15326859 ~ 15360355 (-)
CI01000004_15370117_15389832 PRKCI coding upstream 174294 15369754 ~ 15389832 (-)
G34701 NA non-coding downstream 5690 15179974 ~ 15180249 (-)
G34575 NA non-coding downstream 38977 15109981 ~ 15146962 (-)
G34685 NA non-coding downstream 70590 15113595 ~ 15115349 (-)
G34684 NA non-coding downstream 80237 15105465 ~ 15105702 (-)
G34674 NA non-coding downstream 124142 15061471 ~ 15061797 (-)
G34646 NA non-coding upstream 28201 15223661 ~ 15223942 (-)
G34572 NA non-coding upstream 51046 15246506 ~ 15254180 (-)
G34711 NA non-coding upstream 63984 15259444 ~ 15259772 (-)
G34713 NA non-coding upstream 64820 15260280 ~ 15262403 (-)
G34714 NA non-coding upstream 75234 15270694 ~ 15270899 (-)
G34668 NA other downstream 133164 15051176 ~ 15052775 (-)
G34632 NA other downstream 160718 15011361 ~ 15025221 (-)
CI01000004_14827536_14831360 NA other downstream 357816 14827496 ~ 14831526 (-)
CI01000004_14808034_14808645 NA other downstream 377410 14807938 ~ 14808969 (-)
G34718 NA other upstream 85556 15281016 ~ 15281649 (-)
G34633 NA other upstream 591926 15787386 ~ 15787897 (-)
CI01000004_15832789_15836192 NA other upstream 637113 15832573 ~ 15836231 (-)
G34796 NA other upstream 665153 15860613 ~ 15863748 (-)
G34934 NA other upstream 1206285 16401745 ~ 16421506 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location