G41856


Basic Information

Item Value
gene id G41856
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 1920212 ~ 1921260 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU61886
TTCTGCTTCTAGAGCGACTCCGTGTGCGGGATCGTGTCCGGCTGCGGTCGCGCTCCCTGTCCCGTTCTCGGTCTCTGTCCCGGTCACGAGTGCGGTCCTTACTCCAGCTGCGACTGCGACTGCGACTGTAACTGCGGCTCCGTTCTCTCCTGCGGTTATAACGCTCTCTGTACGAGTCCCTTCTGGGAGGGTTGCGGTCGTACTCTCGCTTCCTGGAGCGGTCATCTTTCTTGCGgtcatccactctcctgtaattTTTTAACCTGCTGTCTCGGCTGTATCTGGAGCTAGACGGAGGACTGTGGTTTATTCTCCTGGAGAATTTCTTTTCTCGATCCTCATCTCGGCTGGGCGGCTTATGCAAAACCAACCACACGAATCAATACCATCAAGCACAAAAGAGAACCGACGGATTAATCAAAATTTGATTTCGTACACTACCGTTTAAAGGATGAGGTCTGTAGGACGAAAGCAACACAAATAGTAGTATTGTAAAGTATTATTAAGGTTACAAATTAAATAGTTGTATTGCAAGAATGCATGATTCGCAAGTAATCTTTCCAATGTGCTGATTCGCTGTTTGTGTTTACTACAGCTAATATTGTTGTAAAGTGactaatattttgtatttattttaacgaAAAGAAATTTCTATGTGAAATagcctttttttgttattttagcattacttttgatcaatttaatgtgcgCTCGCGCAATACGAGCATTCATTTCTGACTCCACATTTCTAAACTGCGTACGATTACTCAAAAGGCCGATCTTATGCGATTGTTTCACGTTACCTcctctctctttgtttcatCTTTCTCCGTGCGCTGGTGAGTTTCGGTTCTGCTTGCAGAAGTCGGCTGCTCTGGTTGAGGTAGGTAACTCTTTGCGTTCACAGCTTCGAAAAGTTTGTCCACGAACGTCTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61886 True 937 lncRNA 0.45 2 1920212 1921260

Neighbor

gene id symbol gene type direction distance location
trak2 LOC107746594,LOC107582328,LOC107686751,LOC107672648 coding downstream 60868 1839000 ~ 1859344 (-)
unc50 unc50,LOC107686789,LOC107746628,LOC107672653 coding downstream 152112 1765156 ~ 1768100 (-)
slc25a12 slc25a12,LOC107686753,LOC107582326,LOC107709078,LOC107557141 coding downstream 155682 1755301 ~ 1764530 (-)
tlk1b tlk1b,LOC107557139,LOC107746598,LOC107709077,LOC107686756 coding downstream 188781 1716729 ~ 1731431 (-)
dmbx1b dmbx1,dmbx1b,LOC107672661,LOC107554873,LOC107746634 coding downstream 353747 1560827 ~ 1566465 (-)
LOC122346433 LOC107718079,LOC107589806,LOC107722642 coding upstream 784273 2705533 ~ 2726242 (-)
LOC122347517 itm2ba,LOC107677554,LOC107584788,LOC107660034,LOC107705560,LOC107581357 coding upstream 865200 2786460 ~ 2792735 (-)
LOC122347520 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 coding upstream 871371 2792631 ~ 2795112 (-)
rtn4a rtn4a,rtn4,LOC107678208,LOC107753895,LOC107672668,LOC107752117 coding upstream 1102125 3023385 ~ 3034793 (-)
mtif2 mtif2,LOC107578070,LOC107581382,LOC107752114 coding upstream 1120212 3041472 ~ 3048286 (-)
G41789 NA non-coding downstream 182964 1736275 ~ 1737248 (-)
LOC122347396 NA non-coding downstream 203871 1635103 ~ 1716341 (-)
G41784 gorasp2,LOC107709057,LOC107746599 non-coding downstream 208672 1711110 ~ 1711540 (-)
G41774 NA non-coding downstream 226863 1687120 ~ 1693349 (-)
G41757 NA non-coding downstream 280145 1588063 ~ 1640067 (-)
G41822 NA non-coding upstream 261 1921521 ~ 1928256 (-)
G41825 NA non-coding upstream 8417 1929677 ~ 1929853 (-)
LOC122346779 NA non-coding upstream 21168 1942428 ~ 2028910 (-)
G41905 NA non-coding upstream 641169 2562429 ~ 2562641 (-)
G41921 NA non-coding upstream 850028 2771288 ~ 2773363 (-)
G41781 NA other downstream 212804 1702833 ~ 1707408 (-)
G41443 NA other downstream 1506659 225710 ~ 413553 (-)
LOC122346746 plxna1b,plxna1,LOC107582336,LOC102795829 other downstream 1525868 389416 ~ 394344 (-)
LOC122346743 dlgap1a,dlgap1,LOC107686064,LOC107550721,LOC107584464,LOC107752864,LOC107690825,LOC107554879,LOC107582307,LOC107705865 other downstream 1741079 158596 ~ 179133 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other upstream 919402 2840662 ~ 2843258 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other upstream 1171280 3092540 ~ 3107938 (-)
cep20 fopnl,LOC107706683,LOC107713084 other upstream 2031268 3952528 ~ 3954331 (-)
G42351 NA other upstream 2037107 3958367 ~ 3961542 (-)
cdk15 cdk15,LOC107706659,LOC107677597,LOC107660030 other upstream 2473147 4394407 ~ 4415213 (-)

Expression


Co-expression Network