LOC122347520 (LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358)


Basic Information

Item Value
gene id LOC122347520
gene name LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 2792631 ~ 2795112 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242880.1
ATGTTTGTCTCTTTTTAACACAGTTTAAATGCAATGTCAGAGGCTGCTCAAAATGGAAGACCCATCCTCAAACGTCCTGGAGTGGGCTTTGGGGTTCTTGTGACAGACTCCTTCAATCCAGGATGTGTCCTGCtaggaaaaagaaaaaccagAGTTGGGAAAGGCACCTACCAGTTACCAGGAGGCCACATCGAATTTGGAGAAACTTGGGAGGAATGTGCCCAGAGAGAGGTGATGGAGGAAGCTGGCGTCCGACTGAAGAACCTTCGCTTTGCGTCAGTTGTAAACTCTATCAGACTGGAGGAAAATTACCATTACGTCACAATCTTCATGCAGGGAGAACTGGACAGGTCTTACTCTGTTGAACCAGTTAATTTGGAGCCAGAGAAGAATGAAGGTTGGACATGGAAGCGGTGGGAAGACTTTCCCCCTGAAGAGCAGCTATTTCTACCATTAGCCAACCTCAGACAGCAGGACTTCCAGCCATTCAGAAAGAGTTAAAAGGATTTTCTGTAATTAAGAAATCATCTTATCACTCCCTGACTTAACCTTATTCAGGTTCAGGTGAACTGAACTCACCTCAGGCTCTTTCTCACTCATTTTAAAGGGAGCATTGACCTAGCAAAAGGACACACGCCCTGACCTTAAGCTGTGAGACTGACATACTGTACTTTCAGATCGACTCTTATGGATATTTACTAAATGTTGCTCTATAGCCTAATGATTTTATTGAACATGTATGTgtactaaattatatataaggCTATTAAGCTGTTAGGTcttatcatatatttatttatacacactggTATATTAAGTATACAGCATGTTATGGgtgatattttgttaaaatgttaaaatcaaacACCTTAAGGTATCCCAAAAGCAAAGCTTTTACAGCCCAAAACTGATTTCTGATTTTTTTAAGCTGATTtctacatatacattttaacatttcaagtaACAAACTAACATTAAcctgtattaataataaattgtattttattgtaaagtgttaccaatatttcATCATTCATCACCTTCCTCATGCAAACAGACAACACCCTTTGCATTTGTAATACTACTGCAAGGAtttcataacatatttttttttccaaataaaccTTACCTGCGCTCCAATAAACATtacctgttttgttttgttttttaagccaCGCCCCATCAGTGaacttattatattaaattattttatattatattattttatattatacgcTGTGGGTTcgtacaatttatttattatattgaaatatatctcgtgttaaaataaaaccaacGACGTTATGTGTATTGGTGGAAACAGCGCCCCCTGTCCGTTCGTCGATGAACATACAGTCTGAATCCGGTCGGCTCGAGCTAAATGCGCCACAGCAACTTGTGAAGCAGTGCAGAGAGGTCGTCGGATTCGCTAAGCTTTCGCTGTAGTTCggcgaagagaaaaaaaaaacctttgacaaaaacaaatttcaGTTGTACGACATGGTGAAACTTGCTTTCAACTCCGCTCTCGGACAGAAGGATTTAAAAAAGGAGGAGAA

Function

NR:

description
PREDICTED: probable 8-oxo-dGTP diphosphatase NUDT15 isoform X1

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K03574 mutT, NUDT15, MTH2; 8-oxo-dGTP diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242880.1 True 1559 mRNA 0.38 3 2792631 2795112

Neighbor

gene id symbol gene type direction distance location
LOC122346433 LOC107718079,LOC107589806,LOC107722642 coding downstream 66389 2705533 ~ 2726242 (-)
trak2 LOC107746594,LOC107582328,LOC107686751,LOC107672648 coding downstream 933287 1839000 ~ 1859344 (-)
unc50 unc50,LOC107686789,LOC107746628,LOC107672653 coding downstream 1024531 1765156 ~ 1768100 (-)
slc25a12 slc25a12,LOC107686753,LOC107582326,LOC107709078,LOC107557141 coding downstream 1028101 1755301 ~ 1764530 (-)
tlk1b tlk1b,LOC107557139,LOC107746598,LOC107709077,LOC107686756 coding downstream 1061200 1716729 ~ 1731431 (-)
rtn4a rtn4a,rtn4,LOC107678208,LOC107753895,LOC107672668,LOC107752117 coding upstream 228273 3023385 ~ 3034793 (-)
mtif2 mtif2,LOC107578070,LOC107581382,LOC107752114 coding upstream 246360 3041472 ~ 3048286 (-)
ccdc88aa ccdc88aa,LOC107752102,LOC107678216,LOC107581383 coding upstream 253802 3048914 ~ 3068202 (-)
pld5 si:ch211-194e18.2,LOC107678171,LOC107752113,LOC107567729,LOC107581384,LOC107753911,LOC107672683 coding upstream 274590 3069702 ~ 3090490 (-)
si:dkey-261j15.2 LOC107678225,LOC107752101,LOC107581302 coding upstream 391455 3186567 ~ 3188418 (-)
G41921 NA non-coding downstream 19268 2771288 ~ 2773363 (-)
G41905 NA non-coding downstream 229990 2562429 ~ 2562641 (-)
LOC122346779 NA non-coding downstream 763721 1942428 ~ 2028910 (-)
G41825 NA non-coding downstream 862778 1929677 ~ 1929853 (-)
G41822 NA non-coding downstream 864375 1921521 ~ 1928256 (-)
G41939 NA non-coding upstream 22919 2818031 ~ 2819591 (-)
G41948 NA non-coding upstream 33133 2828245 ~ 2828708 (-)
G41961 NA non-coding upstream 58927 2854039 ~ 2856147 (-)
G42044 NA non-coding upstream 240081 3035193 ~ 3035582 (-)
G42042 NA non-coding upstream 244411 3039523 ~ 3041038 (-)
G41781 NA other downstream 1085223 1702833 ~ 1707408 (-)
G41443 NA other downstream 2379078 225710 ~ 413553 (-)
LOC122346746 plxna1b,plxna1,LOC107582336,LOC102795829 other downstream 2398287 389416 ~ 394344 (-)
LOC122346743 dlgap1a,dlgap1,LOC107686064,LOC107550721,LOC107584464,LOC107752864,LOC107690825,LOC107554879,LOC107582307,LOC107705865 other downstream 2613498 158596 ~ 179133 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other upstream 45550 2840662 ~ 2843258 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other upstream 297428 3092540 ~ 3107938 (-)
cep20 fopnl,LOC107706683,LOC107713084 other upstream 1157416 3952528 ~ 3954331 (-)
G42351 NA other upstream 1163255 3958367 ~ 3961542 (-)
cdk15 cdk15,LOC107706659,LOC107677597,LOC107660030 other upstream 1599295 4394407 ~ 4415213 (-)

Expression


Co-expression Network