mtif2 (mtif2,LOC107578070,LOC107581382,LOC107752114)


Basic Information

Item Value
gene id mtif2
gene name mtif2,LOC107578070,LOC107581382,LOC107752114
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 3041472 ~ 3048286 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242558.1
TTCTGGGATATAACTGTCATGGCGGCGCCCTTACAGCAGAAATGACATCTGACTTCAGATATTATTTGcttgagtttattttttcttcacacctcTGCTTTCGGAGTCTTTATACTGAATGAACTCAGCCGTGACGGTGTTGAGTGCACTTCCTTTTATTTAaaaatCTGCAATGAAGCGAATAGCAGCCTTGATTGGAAGGACTGCAGTGTCCTGTTGGCATCATGGGAGCCCACATCTTCCCCTTCTTCCTGCCTGGGCCCCCGGAAGTCCTCACACCTGTACGCAGATCCGACACCTGGCTGCGAAACAGAATAAAGGTCAGAAGATCAAATCCAAACCAGTGAAGCTAGAGAAACCACAGAAGCAGGAGGTGGAGATCAAACAGAGGATGACCGTGTCAGAACTCGCCGAGGCCATGAATAAAGACATTGATCATGTCTATGAGGCCCTGCTGAACACAGATGTCGATCTGAACGAGTTGGAGCCCGACACAGAGCTTGAAGAGAAATGGATAAAAGAAGCAGTGAAGAGATCGGGAATGAAACACAAGTGGGCCAAACTGGTAGAAACCAAAATCAGAGAAAACAAAGATATCCAGAGACAACCTCCCCCAGATCACGCTCAGTTAGTCCCTCGAGCTCCAGTGGTGACCATCATGGGTCACGTAGATCATGGAAAGACCACCCTGCTGGACAATCTGAGGAAGAGTCAGATCGCTGCTCAGGAGGCGGGGGGAATCACTCAACACATCGGAGCGTTTCGGGTTCAGCTGCCCTCAGGTGAGAAGATCACTTTTCTGGACACACCTGGTCATGCAGCGTTTTCTGCCATGCGGGCGCGTGGAGCCATGGTCACCGATATAGTCATCCTGGTGGTTGCAGCTGATGATGGTGTGATGAATCAGACTATTGAGTCCATAAAACATGCCAAAAACGCCAAAGTGCCGATTATTGTTGCTGTGAATAAATGTGATAAACCTCAAGCAAATCCCCAACACGTGAAAGAGGAGCTTGTAGTCCATGATGTCGTCTGTGAGGAGTTTGGTGGGGAAATACAGGCCATACATGTGTCTGCATTAAAGGGGGAAAATTTATTACAGCTGGCTGAAGCCACGGTGACGCTGGCAGAGGTCTTGGAGCTGAAGGGTGACCCCACAGGCCTGGTGGAGGGCACGGTCATCGAGAGCCGCTCCGATAAAGGCAAAGGGCCGGTTACCACAGCCATCATCCAGCGCGGCACTCTGAGGAAGGGCTGTACGCTGGTGGCAGGAAAGTGCTGGGCTAAAGTGCGCTTCATCTTTGATGAGTATAATCAGGCCGTGAGCGAGGCCGGACCCAGCATGCCTGTGGAGATCGTGGGTTGGAAGAACATTCCCTCTGCCGGAGAGGAGATCCTGGAGGTGGAATCAGAGcaAAGGGCCCGTGAGGTGGTGGAGTGGCGCAGCTACATGGAAGAACAAGACAAGATGAAAGAAGACCAGCAGGTCATCGAAGTCAAGCAGAAGCAGCATCAGGAGAGCTATAAGAAGGAGAGGGAGAGCATGGCCCATCTCTCCTGGAGACAGAGGAGGGCGGCCCTGTACAAGGCCAACAAACACAAATTCCCCCACAGGGTCAGTGAGAAAACCGAGACGGAGGAACTCAAACTGCCCATCATCGTCAAAGGTGATGTCGATGGCTCAGTAGAAGCTATTTTGAATATCCTGGAAAGCTACGATGCTGATGACCAGTGTGTGTTGGATGTGGTACATTTTGGTGTGGGAGACATCTCAGAAAGAGACATTAACTTGGCGGAGACGTTCTCAGGCACCATATATGGGTTCAACGTCGCCGCAAATAAATCGGTTCAGCAGATGGCTGATAAGAAGGGCATTCCTTTAAGGTTACACAAAGTCATCTACAAACTCATAGACGAGCTCAAAGACGACCTGAGCAGCAACCTGCCTCCAACCAGAGAGGAAAATTTAATCGGGGAGGCCTCAGTTCTGGCCACGTTTGAGGTGACGATTGGGAAAAAGAGGATCCCAGTGGCTGGTTGTAGAGTTCAGAAGGGCGAGCTGGACAAAAAGATGAAATTCAAACTTATCCGAGGGAAAAACATTCTCTGGAAAGGATCCGTGACAACACTGAAACACCTGAAGGATGACGTTCTGACAGTGAAGACAGGCATGGAATGTGGCCTTTCTTTAGATAATGCAGAACTTGAATACAAACCTGGGGATGAAATTATTTGTTACACTGAATCGGAGATCAAACAGAAAATATCTTGGGATCCAGGATTTTAAGGGACTGTATTTGGTGCATCAGTATACAATGCAGTGCAGTTTACATGAATACGCTGTAGCAAACCTGCCTATAGTCACCaactgatcatttaaaaaaataaaatgtgatggTCTTAATTTTGACTCTAGATATCGGGACTGAAATAAGTGTACATAATGTATcttgtaatgtaaatataaacgaGGAAgagtcacattttcaaaaattgagAGAAGTACGCAATATGGCTCATGTAATAAAttgaatacattaaaacatttttgaattcaA
>XM_043242559.1
GTCCCTCGAGCTCCAGTGGTGACCATCATGGGTCACGTAGATCATGGAAAGACCACCCTGCTGGACAATCTGAGGAAGAGTCAGATCGCTGCTCAGGAGGCGGGGGGAATCACTCAACACATCGGAGCGTTTCGGGCTGCCCTCAGGTGAGAAGATCACTTTTCTGGACACACCTGGTCATGCAGCGTTTTCTGCCATGCGGGCGCGTGGAGCCATGGTCACCGATATAGTCATCCTGGTGGTTGCAGCTGATGATGGTGTGATGAATCAGACTATTGAGTCCATAAAACATGCCAAAAACGCCAAAGTGCCGATTATTGTTGCTGTGAATAAATGTGATAAACCTCAAGCAAATCCCCAACACGTGAAAGAGGAGCTTGTAGTCCATGATGTCGTCTGTGAGGAGTTTGGTGGGGAAATACAGGCCATACATGTGTCTGCATTAAAGGGGGAAAATTTATTACAGCTGGCTGAAGCCACGGTGACGCTGGCAGAGGTCTTGGAGCTGAAGGGTGACCCCACAGGCCTGGTGGAGGGCACGGTCATCGAGAGCCGCTCCGATAAAGGCAAAGGGCCGGTTACCACAGCCATCATCCAGCGCGGCACTCTGAGGAAGGGCTGTACGCTGGTGGCAGGAAAGTGCTGGGCTAAAGTGCGCTTCATCTTTGATGAGTATAATCAGGCCGTGAGCGAGGCCGGACCCAGCATGCCTGTGGAGATCGTGGGTTGGAAGAACATTCCCTCTGCCGGAGAGGAGATCCTGGAGGTGGAATCAGAGcaAAGGGCCCGTGAGGTGGTGGAGTGGCGCAGCTACATGGAAGAACAAGACAAGATGAAAGAAGACCAGCAGGTCATCGAAGTCAAGCAGAAGCAGCATCAGGAGAGCTATAAGAAGGAGAGGGAGAGCATGGCCCATCTCTCCTGGAGACAGAGGAGGGCGGCCCTGTACAAGGCCAACAAACACAAATTCCCCCACAGGGTCAGTGAGAAAACCGAGACGGAGGAACTCAAACTGCCCATCATCGTCAAAGGTGATGTCGATGGCTCAGTAGAAGCTATTTTGAATATCCTGGAAAGCTACGATGCTGATGACCAGTGTGTGTTGGATGTGGTACATTTTGGTGTGGGAGACATCTCAGAAAGAGACATTAACTTGGCGGAGACGTTCTCAGGCACCATATATGGGTTCAACGTCGCCGCAAATAAATCGGTTCAGCAGATGGCTGATAAGAAGGGCATTCCTTTAAGGTTACACAAAGTCATCTACAAACTCATAGACGAGCTCAAAGACGACCTGAGCAGCAACCTGCCTCCAACCAGAGAGGAAAATTTAATCGGGGAGGCCTCAGTTCTGGCCACGTTTGAGGTGACGATTGGGAAAAAGAGGATCCCAGTGGCTGGTTGTAGAGTTCAGAAGGGCGAGCTGGACAAAAAGATGAAATTCAAACTTATCCGAGGGAAAAACATTCTCTGGAAAGGATCCGTGACAACACTGAAACACCTGAAGGATGACGTTCTGACAGTGAAGACAGGCATGGAATGTGGCCTTTCTTTAGATAATGCAGAACTTGAATACAAACCTGGGGATGAAATTATTTGTTACACTGAATCGGAGATCAAACAGAAAATATCTTGGGATCCAGGATTTTAAGGGACTGTATTTGGTGCATCAGTATACAATGCAGTGCAGTTTACATGAATACGCTGTAGCAAACCTGCCTATAGTCACCaactgatcatttaaaaaaataaaatgtgatggTCTTAATTTTGACTCTAGATATCGGGACTGAAATAAGTGTACATAATGTATcttgtaatgtaaatataaacgaGGAAgagtcacattttcaaaaattgagAGAAGTACGCAATATGGCTCATGTAATAAAttgaatacattaaaacatttttgaattcaA

Function

symbol description
mtif2 Predicted to enable GTP binding activity; GTPase activity; and translation initiation factor activity. Predicted to act upstream of or within translational initiation. Orthologous to human MTIF2 (mitochondrial translational initiation factor 2).

NR:

description
translation initiation factor IF-2, mitochondrial

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K02519 infB, MTIF2; translation initiation factor IF-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242558.1 True 2558 mRNA 0.47 14 3041472 3048286
XM_043242559.1 False 1922 mRNA 0.48 10 3041472 3046396

Neighbor

gene id symbol gene type direction distance location
rtn4a rtn4a,rtn4,LOC107678208,LOC107753895,LOC107672668,LOC107752117 coding downstream 6679 3023385 ~ 3034793 (-)
LOC122347520 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 coding downstream 246360 2792631 ~ 2795112 (-)
LOC122347517 itm2ba,LOC107677554,LOC107584788,LOC107660034,LOC107705560,LOC107581357 coding downstream 248737 2786460 ~ 2792735 (-)
LOC122346433 LOC107718079,LOC107589806,LOC107722642 coding downstream 315230 2705533 ~ 2726242 (-)
trak2 LOC107746594,LOC107582328,LOC107686751,LOC107672648 coding downstream 1182128 1839000 ~ 1859344 (-)
ccdc88aa ccdc88aa,LOC107752102,LOC107678216,LOC107581383 coding upstream 628 3048914 ~ 3068202 (-)
pld5 si:ch211-194e18.2,LOC107678171,LOC107752113,LOC107567729,LOC107581384,LOC107753911,LOC107672683 coding upstream 21416 3069702 ~ 3090490 (-)
si:dkey-261j15.2 LOC107678225,LOC107752101,LOC107581302 coding upstream 138281 3186567 ~ 3188418 (-)
ccdc85al ccdc85al,LOC107678233,LOC107551935,LOC107752111,LOC107672684,LOC107581303,LOC107753901 coding upstream 166025 3214311 ~ 3230123 (-)
tuba8l4 LOC107387629,LOC108255233,LOC107551929,LOC107659977,LOC107659949 coding upstream 264729 3313015 ~ 3316279 (-)
G42042 NA non-coding downstream 434 3039523 ~ 3041038 (-)
G42044 NA non-coding downstream 5890 3035193 ~ 3035582 (-)
G41961 NA non-coding downstream 185325 2854039 ~ 2856147 (-)
G41948 NA non-coding downstream 212764 2828245 ~ 2828708 (-)
G41939 NA non-coding downstream 221881 2818031 ~ 2819591 (-)
LOC122346399 NA non-coding upstream 136945 3185231 ~ 3186557 (-)
G42080 NA non-coding upstream 240605 3288891 ~ 3289983 (-)
G42254 NA non-coding upstream 442636 3490922 ~ 3491261 (-)
G42235 NA non-coding upstream 487213 3535499 ~ 3538618 (-)
LOC122346554 nfil3-5,LOC107706633,LOC107581326,LOC107678196,LOC107659971,LOC107713076,LOC107706696,LOC107678192,LOC107581323,LOC107659968 non-coding upstream 737613 3785899 ~ 3800450 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other downstream 198214 2840662 ~ 2843258 (-)
G41781 NA other downstream 1334064 1702833 ~ 1707408 (-)
G41443 NA other downstream 2627919 225710 ~ 413553 (-)
LOC122346746 plxna1b,plxna1,LOC107582336,LOC102795829 other downstream 2647128 389416 ~ 394344 (-)
LOC122346743 dlgap1a,dlgap1,LOC107686064,LOC107550721,LOC107584464,LOC107752864,LOC107690825,LOC107554879,LOC107582307,LOC107705865 other downstream 2862339 158596 ~ 179133 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other upstream 44254 3092540 ~ 3107938 (-)
cep20 fopnl,LOC107706683,LOC107713084 other upstream 904242 3952528 ~ 3954331 (-)
G42351 NA other upstream 910081 3958367 ~ 3961542 (-)
cdk15 cdk15,LOC107706659,LOC107677597,LOC107660030 other upstream 1346121 4394407 ~ 4415213 (-)
nudt15 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 other upstream 1445626 4493912 ~ 4497418 (-)

Expression


Co-expression Network