bdnf (bdnf,LOC107554894,LOC107595107,LOC107700392,LOC107670730)


Basic Information

Item Value
gene id bdnf
gene name bdnf,LOC107554894,LOC107595107,LOC107700392,LOC107670730
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 18085501 ~ 18102199 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243059.1
ATTTTCACTCAGCGTCTCGGGGTTGTAGTTGCTACCTAAACTTGACCGCCTTCGCGTCTTTCAATCACGTAAGAGCACTAACGGCTTTTCTCTGAGCGAGGGCACTGCGTAAATCTGTATAGGGGTTTTGGGTAAATCGCGACTGGTTGCTATTTGTCCTGTCGGCACAGTCACCAAGGTGTTAGAGAGTTTAAGCACGCGGATATTGCAAAGGGTTATTAGATTCATAAGTCACCCAAGTGGTGGGCGATCTTCTGAGCACGGCAGAAGTTCTCATATGATGACTTCAAACAAGACACATTACCTACCAGCATCTGTTGGAGTGTGTGGATATTAAGACACTTCTATCTCCAGGACAGCATAGGGGAACATGTTCCAACAGGTTAGAAGAGTGATGACCATCCTGTTCGTTACTATGGTTATTTCATACTTCAGTTGCATGAGAGCTGCGCCCATGAGAGAGATCCCGGGCGTACAGGGGGGCCACCGGGCCGAGGGCTACCTGGGTGCcgctgccgccgccgccgctgccGTCACCTCAGGCAGCCGAGGCCACGGGACTCCACAGAGTGGGGGCGGGCTGCCCTCGCTCACGGACACTTTCGAGCAGGTGATTGAGGAGTTGCTTGAGGTGGAAGGAGAGGCGACGCAGCAACTGGGGCCCGGGGTCGACCAGGGCCAAGGAGGGAGCGGTCCCGCAGCCGTGGCTGACTCGAAGGACGTTGACATGTACGCCTCGCGGGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCTTGGAGGAATACAAAAACTACCTGGACGCCGCCAACATGTCGATGCGCGTGCGGCGGCACTCGGACCCCGCGCGGCGAAGGGAGCTCAGCGTTTGTGACAGTATTAGCCAGTGGGTGACGGCTCTGGACAAAAAGACGGCCATAGATATGTCGGGCCAGACGGTCACCGTCCTGGAGAAGGTCCCCGTGACTAACGGTCAGCTGAAGCAATACTTTTACGAGACCAAATGCAACCCCTTGGGGTACACAAAGGAGGGCTGCCGAGGAATAGACAAGCGGCACTATAACTCGCAATGCCGGACAACCCAGTCTTACGTGCGAGCCCTTACCATGGATAGCAAAAGGAAGATCGGCTGGCGGTTTATACGGATAGACACTTCGTGTGTATGCACATTGACCATTAAGAGGGGCAGATAGTGTACACAATGTATAGATTTTATTGAGAGTTCTAAAAAagagacataaaataaaaaaatatctatttgtGTAAATACATAACAGGGTAAATTATTCCGTCAGATGAAAATTTTATGGACTGCATGTAAAAAAGATGAAGTTTATACAGTAAAAGTGATACTACAGTCTATTTATTGAACATATTCATGATCttgtaaacaattaaaaaaagatctgaTCAGTCA
>XM_043243060.1
GAATAAGCGTCTCACTCGGTTCGGTTGGCGCTCGGTCGCGCTCGCGCTGGAGTCACATGTTGCAACGTCACGCAGTAGTTACTGTTGTCGCGAGGAATGAAGCCTTCATTTCAAGCTGGAGAGCTCTCTCAATGCGCACTACACAGCGAGCGCTCACCATGCCATCCAACTGCTTCAACCCAACTCCAAAGGATCCGCTCAGTCATGGGAGTCCATTACCTCAACCATGCAATTTCCACCATCAATAATTTAATCTATTTGCTCAAAAGCTGAAGAGACAACTTGCAGCTGCTGCTTGGCAAAGAGCGGGCGAATATCGCAAAATAGTTACGCGGAGGGCTTATCCAAAACATCCCAGATGACACTGTCCTGCTGAATGGTCTCCTTTACGACTGGACAGTAAAGTTCCAACAGGTTAGAAGAGTGATGACCATCCTGTTCGTTACTATGGTTATTTCATACTTCAGTTGCATGAGAGCTGCGCCCATGAGAGAGATCCCGGGCGTACAGGGGGGCCACCGGGCCGAGGGCTACCTGGGTGCcgctgccgccgccgccgctgccGTCACCTCAGGCAGCCGAGGCCACGGGACTCCACAGAGTGGGGGCGGGCTGCCCTCGCTCACGGACACTTTCGAGCAGGTGATTGAGGAGTTGCTTGAGGTGGAAGGAGAGGCGACGCAGCAACTGGGGCCCGGGGTCGACCAGGGCCAAGGAGGGAGCGGTCCCGCAGCCGTGGCTGACTCGAAGGACGTTGACATGTACGCCTCGCGGGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCTTGGAGGAATACAAAAACTACCTGGACGCCGCCAACATGTCGATGCGCGTGCGGCGGCACTCGGACCCCGCGCGGCGAAGGGAGCTCAGCGTTTGTGACAGTATTAGCCAGTGGGTGACGGCTCTGGACAAAAAGACGGCCATAGATATGTCGGGCCAGACGGTCACCGTCCTGGAGAAGGTCCCCGTGACTAACGGTCAGCTGAAGCAATACTTTTACGAGACCAAATGCAACCCCTTGGGGTACACAAAGGAGGGCTGCCGAGGAATAGACAAGCGGCACTATAACTCGCAATGCCGGACAACCCAGTCTTACGTGCGAGCCCTTACCATGGATAGCAAAAGGAAGATCGGCTGGCGGTTTATACGGATAGACACTTCGTGTGTATGCACATTGACCATTAAGAGGGGCAGATAGTGTACACAATGTATAGATTTTATTGAGAGTTCTAAAAAagagacataaaataaaaaaatatctatttgtGTAAATACATAACAGGGTAAATTATTCCGTCAGATGAAAATTTTATGGACTGCATGTAAAAAAGATGAAGTTTATACAGTAAAAGTGATACTACAGTCTATTTATTGAACATATTCATGATCttgtaaacaattaaaaaaagatctgaTCAGTCA
>XM_043243061.1
ttgcagttcTTTTGCCAAAGCTAGGGAATTGTTTgactttttccttctttttttcgcTTTCGGAGGGAGAccggtgaaaaaaaaaacaaaaaaaacaaacgcgAGGAAAAGAACCAGTCGATAGTGGGCTGCTTACTTTGCGCTTGGAGTTTTGTCGCCACTTAGAGCATGTGAAAGTTGCAATGGTAGAGCTGCTGTAGTGTACGCGTACTTTGCAAGCTCCACTTGGTGCACAGCGTTAACTTTGGGAAATGCAAGTGTTGGTCTTGGAGATCTAACCACTGATAGTGGTTGTCAGCTCTTAAAAAGTTCCAACAGGTTAGAAGAGTGATGACCATCCTGTTCGTTACTATGGTTATTTCATACTTCAGTTGCATGAGAGCTGCGCCCATGAGAGAGATCCCGGGCGTACAGGGGGGCCACCGGGCCGAGGGCTACCTGGGTGCcgctgccgccgccgccgctgccGTCACCTCAGGCAGCCGAGGCCACGGGACTCCACAGAGTGGGGGCGGGCTGCCCTCGCTCACGGACACTTTCGAGCAGGTGATTGAGGAGTTGCTTGAGGTGGAAGGAGAGGCGACGCAGCAACTGGGGCCCGGGGTCGACCAGGGCCAAGGAGGGAGCGGTCCCGCAGCCGTGGCTGACTCGAAGGACGTTGACATGTACGCCTCGCGGGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCTTGGAGGAATACAAAAACTACCTGGACGCCGCCAACATGTCGATGCGCGTGCGGCGGCACTCGGACCCCGCGCGGCGAAGGGAGCTCAGCGTTTGTGACAGTATTAGCCAGTGGGTGACGGCTCTGGACAAAAAGACGGCCATAGATATGTCGGGCCAGACGGTCACCGTCCTGGAGAAGGTCCCCGTGACTAACGGTCAGCTGAAGCAATACTTTTACGAGACCAAATGCAACCCCTTGGGGTACACAAAGGAGGGCTGCCGAGGAATAGACAAGCGGCACTATAACTCGCAATGCCGGACAACCCAGTCTTACGTGCGAGCCCTTACCATGGATAGCAAAAGGAAGATCGGCTGGCGGTTTATACGGATAGACACTTCGTGTGTATGCACATTGACCATTAAGAGGGGCAGATAGTGTACACAATGTATAGATTTTATTGAGAGTTCTAAAAAagagacataaaataaaaaaatatctatttgtGTAAATACATAACAGGGTAAATTATTCCGTCAGATGAAAATTTTATGGACTGCATGTAAAAAAGATGAAGTTTATACAGTAAAAGTGATACTACAGTCTATTTATTGAACATATTCATGATCttgtaaacaattaaaaaaagatctgaTCAGTCA
>XM_043243063.1
AGTGTTCGCGCTCTGATGGAATTTTACTGATAACAGACAACGGTCGTACTTGGATTTCGTGACTTCCATTTCGTTCCTTATGTCAAGATAAAGGCGTACGGGGGGAAATAACGTTGTCATTTCTTTAAGTTGACAGCGTGCCTCAAGACTGACGAGGattcagcttttttcttttcctgtagTATACACATAACGAAGCTCAAATCTGTATTGCACAGATTTCCAACAGGTTAGAAGAGTGATGACCATCCTGTTCGTTACTATGGTTATTTCATACTTCAGTTGCATGAGAGCTGCGCCCATGAGAGAGATCCCGGGCGTACAGGGGGGCCACCGGGCCGAGGGCTACCTGGGTGCcgctgccgccgccgccgctgccGTCACCTCAGGCAGCCGAGGCCACGGGACTCCACAGAGTGGGGGCGGGCTGCCCTCGCTCACGGACACTTTCGAGCAGGTGATTGAGGAGTTGCTTGAGGTGGAAGGAGAGGCGACGCAGCAACTGGGGCCCGGGGTCGACCAGGGCCAAGGAGGGAGCGGTCCCGCAGCCGTGGCTGACTCGAAGGACGTTGACATGTACGCCTCGCGGGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCTTGGAGGAATACAAAAACTACCTGGACGCCGCCAACATGTCGATGCGCGTGCGGCGGCACTCGGACCCCGCGCGGCGAAGGGAGCTCAGCGTTTGTGACAGTATTAGCCAGTGGGTGACGGCTCTGGACAAAAAGACGGCCATAGATATGTCGGGCCAGACGGTCACCGTCCTGGAGAAGGTCCCCGTGACTAACGGTCAGCTGAAGCAATACTTTTACGAGACCAAATGCAACCCCTTGGGGTACACAAAGGAGGGCTGCCGAGGAATAGACAAGCGGCACTATAACTCGCAATGCCGGACAACCCAGTCTTACGTGCGAGCCCTTACCATGGATAGCAAAAGGAAGATCGGCTGGCGGTTTATACGGATAGACACTTCGTGTGTATGCACATTGACCATTAAGAGGGGCAGATAGTGTACACAATGTATAGATTTTATTGAGAGTTCTAAAAAagagacataaaataaaaaaatatctatttgtGTAAATACATAACAGGGTAAATTATTCCGTCAGATGAAAATTTTATGGACTGCATGTAAAAAAGATGAAGTTTATACAGTAAAAGTGATACTACAGTCTATTTATTGAACATATTCATGATCttgtaaacaattaaaaaaagatctgaTCAGTCA
>XM_043243064.1
ATTTTCACTCAGCGTCTCGGGGTTGTAGTTGCTACCTAAACTTGACCGCCTTCGCGTCTTTCAATCACGTAAGAGCACTAACGGCTTTTCTCTGAGCGAGGGCACTGCGTAAATCTGTATAGGGGTTTTGGGTAAATCGCGACTGGTTGCTATTTGTCCTGTCGGCACAGTCACCAAGGTGTTAGAGAGTTTAAGCACGCGGATATTGCAAAGGGTTATTAGATTCATAAGTCACCCAAGTGGTGGGCGATCTTCTGAGCACGGCAGAAGTTCTCATATGATGACTTCAAACAAGACACATTACCTACCAGCATCTGTTGGAGTGTGTGGATATTAAGACACTTCTATCTCCAGGACAGCATAGGGGAACATGCACTTTGGACAGAGGCACCGGAGTCGTTGAACGCTGCGGACTAACACGGATTCCAACAGGTTAGAAGAGTGATGACCATCCTGTTCGTTACTATGGTTATTTCATACTTCAGTTGCATGAGAGCTGCGCCCATGAGAGAGATCCCGGGCGTACAGGGGGGCCACCGGGCCGAGGGCTACCTGGGTGCcgctgccgccgccgccgctgccGTCACCTCAGGCAGCCGAGGCCACGGGACTCCACAGAGTGGGGGCGGGCTGCCCTCGCTCACGGACACTTTCGAGCAGGTGATTGAGGAGTTGCTTGAGGTGGAAGGAGAGGCGACGCAGCAACTGGGGCCCGGGGTCGACCAGGGCCAAGGAGGGAGCGGTCCCGCAGCCGTGGCTGACTCGAAGGACGTTGACATGTACGCCTCGCGGGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCTTGGAGGAATACAAAAACTACCTGGACGCCGCCAACATGTCGATGCGCGTGCGGCGGCACTCGGACCCCGCGCGGCGAAGGGAGCTCAGCGTTTGTGACAGTATTAGCCAGTGGGTGACGGCTCTGGACAAAAAGACGGCCATAGATATGTCGGGCCAGACGGTCACCGTCCTGGAGAAGGTCCCCGTGACTAACGGTCAGCTGAAGCAATACTTTTACGAGACCAAATGCAACCCCTTGGGGTACACAAAGGAGGGCTGCCGAGGAATAGACAAGCGGCACTATAACTCGCAATGCCGGACAACCCAGTCTTACGTGCGAGCCCTTACCATGGATAGCAAAAGGAAGATCGGCTGGCGGTTTATACGGATAGACACTTCGTGTGTATGCACATTGACCATTAAGAGGGGCAGATAGTGTACACAATGTATAGATTTTATTGAGAGTTCTAAAAAagagacataaaataaaaaaatatctatttgtGTAAATACATAACAGGGTAAATTATTCCGTCAGATGAAAATTTTATGGACTGCATGTAAAAAAGATGAAGTTTATACAGTAAAAGTGATACTACAGTCTATTTATTGAACATATTCATGATCttgtaaacaattaaaaaaagatctgaTCAGTCA
>XM_043243065.1
GATCCTTCTCACGCATCTACTAGTTCGCCAAACGTCAATTATTTAAGACCTTATAAAAGCGTTTATTATAACATAGCCCACTGTGATTACGCTGTCTGTCGTGAAGTAACCGCCCGATATGGATCACACTGCACGTGCGCGGCATACTGTTGTCATGGTTACCTCAGACGTCTCTTCCGTCCGTTGTTCGACAACAGGTGAAAACTCGCGAGCCGATTAACTCAGAATCGAACTTTTATGAATGATTTTGATAAAACCGTATATACTTGGGCAAATAACGTAAAGCCAAACACTCCGTCACATTGACGTAAACCACTGCATGTCTTATTCGAAACAGTTTGTTTCCCTTCTAGTAGACTCTTCCAGCTTCTGTTTTATATTCTTCACCATAGATGATAAAGTGTTAAAGAGATAAAGAGTGTTATTTTGCAGTTGTCTCTTGATGTGGTACCGCTAATGCCAGATTGTGAATATTACGGATTCCACATTTTAATGCCTCAAAGTCAGAATAATAATTAACACCTGTGTGAGCTTAGGTGATGCACGCTACAGTGTTCTTGTCATTCTAAAATCTTTTCTCAGGCCACAAGCCTTTTCcccaacttttcttttcttttcaaatatttaatcgCACGTTGTTAAATATCTTTGTCCTGAAAGAGTGAAtgccttttttcatttttttctttagagtGCTAAGAATAGCTTCTGAAAAGTGTCTGTTACCACAATTCTTTTAAGTTAGAAAAGTCTTATCCGTCTGTCATGAGcggtttttggtttttaatccCTTTATGGCATGGAGATTTAAGCAAATACAGTTGTGGGGGAATCAAGATCATGCAGACCAATCTATCCAGTCCTACCTGCCCATTTCCAAACAATTGAGCAGGTGCATGTGGTCTTTTTGCCAAAACCATAGAACTGCCACTCATGCCCAATTAAAGTACAATCGTGTTTTACAGTGAAAGGCGTTTGAACGTGCTCCTACCCGAGCCCCGACCAAATACAGCTGTGTGGATGAAGTATTTCATCAAGCATTCTGTACCTTACTTTGTAGATAGAGAGCTTGAAAGATCACTGGTTTGTCATGTGAGAGGTTTGATTGATGGAAACCTGGTTTGTTGTACTGTATATTCAATGCCTCATAATGAATCTGGCTTCAAAGGCTTAACAAGTGGGACACAAAGAGCTTGAATTAACAGCTTTGTTTACCTACCAGTTGAACCAATTATTTCGCCATCAACCATGTaagtcatctttttttattttggacatttaaacacacctgaacccgTGACTGGATTCTTCTTTGTGGCGGCTACAACCGCATCGCCACTCGTGCTCTGTGACCCATCGAGAACACCTGTACCGCCCGTGTACACAAACATAACTCATGTTTGCACATCATATGACAGGATATTGATATCGCATTATCATGCGCAGCTCAAACGCACGCATATTAAAAGCAGAACAAACATGTCCGTCAAGGTAATCTTGTCTTCCCTCGCCGCTTTGAATGAGACAGAAGGTCTCGGTTATTGCCAACTCAGTCCCAGAGCAATAAAGTGATTCATCGTCTAGATTACCGTTTAACaggaagttgattgagagcataaTCCATATTGATTCTCCTGATGGAAACAGGAAATAGCAGAGTTAGAAATAAAATCGTTTGTTGTTCCTGGTGAGAAGGGACCCCAGAGGAAAATGGAAAGCAATTGCGAGCTGATGAGTGGCACTGCCCCCTAGCACCCGCTCCTTCTAGCCCCACCGCCCTTTTCCTCTCATCCCCTTTGAGACCAGAGAGAGACGTCATCAGGGTTGTTGTGCTCTCGGCCTCCACCCCCTGCCACACAACTACACACCGGTGCTCTAGTCTAATTAGGAGGAAAAGCTACAGTTTAGCCAGCGCTGTGTGCTAAAGTTCAGTAGTCAACAGTAACTGACTTTCGCCCCTTATGCGTGACACCTCGAAGCAGTGTAGCtctgtaatatatttaaggTTATGTATTACCGGTAGGATTTGGAAGAGAGATGGCATTGGCACTCCGCCTGCTGTCAGGTAGGGCAACAGAAGGGATTTGCGTGTCAGCATGACTGATGCTGGTATTTCATTCAGAAGCctttgcaatatatataaatacttctCTCATTAGGGAGACGACAGATGTTTGCTAATTGGGATCATCCTGAAACTGGGGCGTTACTGGGCTGTGCCGCTCCGTGTGTGCGTAAAACCCACATTAAGGTTGTCTTGAGAGCAGGAACGCTGACAATAATCCATCCGTCCCTCCACAGGCGCGACACATCTGGAGGAATGAAATAAGACAGAATCATTGAATAATCCTCAGGCAGGCACTTTAAATTCCTCGCTATATTCAGCAGAGGTAATTGCTGACAATGTAAGAAGCTTTTTCCATTACGGGGAAAGCTGACAGACTGAAGTATCTTTTCATGCCTGCAGAAGCAGCTTGTACACACATTTTGCACGCTGCCTGATTTGATTAAGATTGATCTGTCCTCCACAGCTGTATCCTCGGCTCTGGGTTTTTCCATGCTTGTTTTTGACCATTTGAGAGGAGAGATTAAAGATGCTCCCACCTCATCTCCctagccaaacacacacacacacacacacacgctggcgCTCACACGCtccctcactcacacacacacacacacacacacccctcgtGGACTGCGACGTCACTGAGCGAGGGGACTTTGAGCTCATTAAGTAGAGGGCTGTGATATTCTGAATCGAGACTGTGGGACTCCCAACCGGCCTATTTATAGAAAGCACATCTCCATGGCAGTCATCGCTGCGCTAGCAAATCGCAGCCGTGGCCCCAGACACCAATTAAGAATGAAACAAATGCCTTTTAGACAGGGCGTGTCCCTCCTTCTCTCCTACCGGCCCGTACTGCCTTCTGCTCTGGGACTGGATCCTCCCTCTGCCTCTTCCTGAGGCTGCGTGGGGCATCGGGAGGACAGCACACAGAGAACTGGCGAAACCTTGATGCGGTGctggatatttttaaatgcactccCCCCTCCACCCCCTTTCCCCACCCCTACCTCTCCCCTTCTCCTTCTCCGTAGAAAAGTGAGAGTAATgggtattttttgttgttgtgtatGCATGTTCCCCTGTCTGTTCGTATGCGCTGGGATGCCTTTGGATGCAATGAATCGCAGTGACTCATAGAGGGACTTCAGAGAGTTCCAACAGGTTAGAAGAGTGATGACCATCCTGTTCGTTACTATGGTTATTTCATACTTCAGTTGCATGAGAGCTGCGCCCATGAGAGAGATCCCGGGCGTACAGGGGGGCCACCGGGCCGAGGGCTACCTGGGTGCcgctgccgccgccgccgctgccGTCACCTCAGGCAGCCGAGGCCACGGGACTCCACAGAGTGGGGGCGGGCTGCCCTCGCTCACGGACACTTTCGAGCAGGTGATTGAGGAGTTGCTTGAGGTGGAAGGAGAGGCGACGCAGCAACTGGGGCCCGGGGTCGACCAGGGCCAAGGAGGGAGCGGTCCCGCAGCCGTGGCTGACTCGAAGGACGTTGACATGTACGCCTCGCGGGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCTTGGAGGAATACAAAAACTACCTGGACGCCGCCAACATGTCGATGCGCGTGCGGCGGCACTCGGACCCCGCGCGGCGAAGGGAGCTCAGCGTTTGTGACAGTATTAGCCAGTGGGTGACGGCTCTGGACAAAAAGACGGCCATAGATATGTCGGGCCAGACGGTCACCGTCCTGGAGAAGGTCCCCGTGACTAACGGTCAGCTGAAGCAATACTTTTACGAGACCAAATGCAACCCCTTGGGGTACACAAAGGAGGGCTGCCGAGGAATAGACAAGCGGCACTATAACTCGCAATGCCGGACAACCCAGTCTTACGTGCGAGCCCTTACCATGGATAGCAAAAGGAAGATCGGCTGGCGGTTTATACGGATAGACACTTCGTGTGTATGCACATTGACCATTAAGAGGGGCAGATAGTGTACACAATGTATAGATTTTATTGAGAGTTCTAAAAAagagacataaaataaaaaaatatctatttgtGTAAATACATAACAGGGTAAATTATTCCGTCAGATGAAAATTTTATGGACTGCATGTAAAAAAGATGAAGTTTATACAGTAAAAGTGATACTACAGTCTATTTATTGAACATATTCATGATCttgtaaacaattaaaaaaagatctgaTCAGTCA

Function

symbol description
bdnf Predicted to enable growth factor activity and nerve growth factor receptor binding activity. Acts upstream of or within multicellular organismal response to stress and nervous system development. Predicted to be active in several cellular components, including axon; dendrite; and synaptic vesicle. Is expressed in several structures, including blastoderm; digestive system; nervous system; oral region; and pericardial region. Human ortholog(s) of this gene implicated in several diseases, including cognitive disorder (multiple); congenital central hypoventilation syndrome; neurodegenerative disease (multiple); obstructive sleep apnea; and status epilepticus. Orthologous to human BDNF (brain derived neurotrophic factor).

NR:

description
PREDICTED: brain-derived neurotrophic factor isoform X1

GO:

id name namespace
GO:0007420 brain development biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K04355 BDNF; brain-derived neurotrophic factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243059.1 False 1431 mRNA 0.50 2 18085501 18101687
XM_043243060.1 False 1463 mRNA 0.51 2 18085501 18092732
XM_043243061.1 False 1367 mRNA 0.50 2 18085501 18100508
XM_043243063.1 False 1278 mRNA 0.50 2 18085501 18102199
XM_043243064.1 False 1481 mRNA 0.51 3 18085501 18101687
XM_043243065.1 True 4284 mRNA 0.47 2 18085501 18090796

Neighbor

gene id symbol gene type direction distance location
lin7c lin7c,LOC107755067,LOC107595064,LOC107091323,LOC108432380 coding downstream 2409 18075757 ~ 18083092 (-)
cars1 cars,LOC107740410,LOC107700453,LOC107670769,LOC107755065 coding downstream 40944 18031143 ~ 18044557 (-)
nap1l4b nap1l4,nap1l4b,LOC107700452,LOC107670756 coding downstream 54945 18021292 ~ 18030556 (-)
igdcc4 igdcc4,LOC107670755,LOC107700451,LOC107595068,LOC107755063,LOC107554907,LOC107750477 coding downstream 71326 17960383 ~ 18014175 (-)
igdcc3 igdcc3,LOC107750478,LOC107670768,LOC107755062,LOC107700450,LOC107554891 coding downstream 127921 17888607 ~ 17957580 (-)
kif18a kif18a,LOC107554904,LOC107740412,LOC107670760,LOC107700457,LOC107755033,LOC107595063 coding upstream 14892 18117091 ~ 18138373 (-)
LOC122349713 arl14ep,LOC107663944,LOC107740492,LOC107554899,LOC107700465,LOC107755038 coding upstream 294823 18397022 ~ 18400506 (-)
LOC122348011 LOC107749239,LOC107663077,LOC107574829,LOC107573432 coding upstream 421531 18523730 ~ 18527780 (-)
LOC122348778 LOC107725540,LOC107590035,LOC107587062,LOC107744909 coding upstream 442512 18544711 ~ 18617165 (-)
LOC122349640 calca,LOC107593372,LOC107688176,LOC107750650,LOC107700617,LOC107586036,LOC107754683 coding upstream 533255 18635454 ~ 18645525 (-)
G54093 NA non-coding downstream 11019 18070651 ~ 18074482 (-)
G54087 mybpc3,LOC107740474,LOC107670721,LOC107554890 non-coding downstream 28964 18055593 ~ 18056537 (-)
G53983 NA non-coding downstream 449482 17632003 ~ 17636019 (-)
G53974 NA non-coding downstream 458181 17627121 ~ 17627320 (-)
G53970 NA non-coding downstream 476143 17609153 ~ 17609358 (-)
G54104 NA non-coding upstream 36454 18138653 ~ 18138939 (-)
LOC122349130 NA non-coding upstream 258717 18360916 ~ 18386011 (-)
G54283 NA non-coding upstream 287007 18389206 ~ 18390530 (-)
G54292 NA non-coding upstream 439477 18541676 ~ 18578093 (-)
G54317 NA non-coding upstream 604256 18706455 ~ 18706860 (-)
serf2b NA other downstream 1037460 17046444 ~ 17048041 (-)
G53797 tpm1,LOC103462590 other downstream 1151249 16881893 ~ 16934252 (-)
nrn1lb nrn1lb,LOC107750645,LOC107586039,LOC107594653,LOC107741430 other downstream 1521163 16560418 ~ 16564338 (-)
rnaseka rnaseka,rnasek,LOC107750577,LOC107561913,LOC107678101,LOC107749794,LOC107594736,LOC107669181 other downstream 3110333 14973703 ~ 14975168 (-)
G52917 LOC105896813 other downstream 3940221 14144506 ~ 14145280 (-)
LOC122349446 arl14ep,LOC107663944,LOC107740492,LOC107554899,LOC107700465,LOC107755038 other upstream 564074 18666273 ~ 18669833 (-)
G54312 LOC107663979,LOC107557712,LOC107740422,LOC107700467,LOC107553073,LOC107755077,LOC108430810 other upstream 639961 18742160 ~ 18794207 (-)
G54330 LOC107557708,LOC107553077,LOC107740430,LOC107700368 other upstream 744077 18846276 ~ 19291166 (-)
LOC122348206 tph1b,LOC107740493,LOC107557706,LOC107663941,LOC107553080,LOC108430795 other upstream 807449 18909648 ~ 18914921 (-)
G54377 mns1,LOC107755086,LOC107553079,LOC107740431,LOC107663983 other upstream 1209449 19311648 ~ 19312124 (-)

Expression


Co-expression Network