G61159


Basic Information

Item Value
gene id G61159
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 4851670 ~ 4852112 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU90534
GTcgcctttgtgtgtgtttatttatttcgaatttattacataaaatgacTTCCTACGGTAAATTCATAGACATTTTCTTAAACGTTAAACATTTATGTGGTTATGGGTAAAGCATCTCTCAAAAATCAATACggaaactttattttacacctttattttatacttattataGTATTTAGGATTACTGCTAACACTGAACTTACCGCTAAACCCAACCATAGCATTATATTACGTcctgagataaaaaaaaagtacacttttagtTTACATGAAatgcacatactgtaaaataaagtactgCCGAAATTTCCTTTATATTAAAACGGTATACTGCCGTATAAAAAAGTacgctaaataaaaacaaaaacagtggtATTGATATGCAAAAAAGGACCGGCATGCATATCATACGCAGTTTtcgcgtgcatatgatacgaaTGTAC

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU90534 True 443 lncRNA 0.31 1 4851670 4852112

Neighbor

gene id symbol gene type direction distance location
LOC122350108 LOC107653401 coding upstream 4482 4834488 ~ 4847188 (+)
kcnd1 kcnd1,LOC107584898,LOC107601760 coding upstream 25437 4769240 ~ 4826233 (+)
gripap1 gripap1,LOC107653413,LOC107743091,LOC107674351,LOC107734529 coding upstream 111462 4697359 ~ 4740208 (+)
mon1ba LOC107653417,LOC107743134,LOC107601752 coding upstream 155115 4691775 ~ 4696555 (+)
pnck pnck,LOC107601755,LOC107653407,LOC107743135,LOC108441108,LOC105889742,LOC108265019 coding upstream 368472 4474360 ~ 4483198 (+)
pim1 pim1,LOC107734527,LOC107674355,LOC107584899,LOC107598956,LOC107725309,LOC108438567,LOC103031835,LOC105889771 coding downstream 149433 5001545 ~ 5005441 (+)
tbc1d22b tbc1d22b,LOC107653399,LOC107734531,LOC107674367,LOC107725284 coding downstream 168452 5020564 ~ 5064931 (+)
LOC122349937 ift81,LOC107725332,LOC107599023,LOC106585468 coding downstream 356414 5208526 ~ 5226476 (+)
mapk13 mapk13,mk13,LOC107725303,LOC107598961,LOC107734522,LOC108265696,LOC108438563,LOC107653398 coding downstream 461422 5313534 ~ 5323848 (+)
brpf3b brpf3,brpf3b,LOC107725302,LOC107674334,LOC107734521,LOC107653397,LOC107570975 coding downstream 473049 5325161 ~ 5338309 (+)
LOC122350971 NA non-coding upstream 101346 4741901 ~ 4750324 (+)
G61113 NA non-coding upstream 178662 4672173 ~ 4673008 (+)
G61108 NA non-coding upstream 194008 4657340 ~ 4657662 (+)
G61089 NA non-coding upstream 338105 4510004 ~ 4513565 (+)
G61087 LOC107687770,LOC107743582,LOC107696015,LOC107572510,LOC107738665 non-coding upstream 352263 4498877 ~ 4499407 (+)
G61160 NA non-coding downstream 167 4852279 ~ 4853456 (+)
G61189 NA non-coding downstream 39336 4891448 ~ 4917426 (+)
G61190 NA non-coding downstream 56811 4908923 ~ 4910186 (+)
LOC122349982 NA non-coding downstream 132518 4984630 ~ 4999097 (+)
LOC122350006 NA non-coding downstream 287617 5139729 ~ 5144124 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 777773 4029303 ~ 4073897 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other upstream 920182 3924861 ~ 3931488 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other upstream 1001113 3848614 ~ 3850557 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 2811834 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 2815690 2030824 ~ 2035980 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 252458 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 374840 5226952 ~ 5229608 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other downstream 1903993 6756105 ~ 6766543 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other downstream 1996369 6848481 ~ 6849711 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other downstream 2454007 7306119 ~ 7529086 (+)

Expression


Co-expression Network