pptc7a (pptc7a,LOC107552188,LOC107553043,LOC107671007,LOC107699657,LOC105891618,LOC108430358,LOC103044306)


Basic Information

Item Value
gene id pptc7a
gene name pptc7a,LOC107552188,LOC107553043,LOC107671007,LOC107699657,LOC105891618,LOC108430358,LOC103044306
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2804285 ~ 2813140 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247826.1
AGTCACAAGACTTCAGTCGCGTCGCGGCCTTCGGCAGCAGTTCACGAGCTGACACGCGAGCGGAGCGCGCGACGATGGGGCTCGGCGCGAGAAACCCCGGATCGGCTTGGACGTTCTGAATCGCATCGGATCGATCGATATGGACGGCTGAATTTTCTGGACGGCGGGAATCGCAACGCCCGATTGACACCGCGGATGCTCTTCTCTTGTTGTGACACCTCCAGACGTCATCTCGAGCCCGCGGATCTGTTGTTGGTAGTCTTAACTAACCCAAACTAACCCCTGCAGCGGAGTCCGGGGGTGATGCTGTCCGTTCTCTCGTACGGTAGACTGGTGGCCCGAGCGGTCATCGGCGGACTCTCTCAAACCGACAGCCGTGATTACAGCCTGGTGTCCGCCAGCTTCGGCTTCGGCAAGGATTTTCGGAAGGGGATCTTGAAGAAAGGGATGTGTTATGGGGACGACGCGTGCTTCATAGCCCGGCACAGATCTGCTGATGTGTTAGGTGTGGCTGATGGAGTAGGCGGCTGGCGTGACTATGGGGTTGATCCCTCTCAGTTCTCTGGGACGCTCATGAGGACGTGTGAGAGGCTGGTTAAAGAAGGACGATTTGTGCCGAGCAACCCAGTGGGGATCCTCACCACCAGCTATTATGAGCTACTTCAGAACAAAGTACCGCTATTAGGAAGCAGTACAGCGTGTATCGTGGTACTAGACAGGCAGAGTCACCGGCTACACACGGCAAACCTGGGAGACTCTGGCTTTCTGGTGGTTCGAGGTGGAGAGGTGGTCCACAGGTCTGATGAACAGCAGCACTACTTCAACACCCCTTTCCAGCTCTCTATCGCCCCACCTGAGGCAGAGGGCTCCGTCCTCAGTGACAGCCCCGAGGCTGCCGATAGCTCATCCTTCGATGTCCAGTTGGGTGATATCATACTCACAGCTACAGATGGACTTTTTGACAACATGCCAGACTATATGATTTTACAAGAACTCAAAAAGCTCAAGAATACCAACTATGAAAGCATCCAGCAAACAGCCAAGAGCATTGCAGAACAGGCCCATGTTCTAGCATACGACCCCAATTACATGTCTCCATTTGCACAGTTTGCCTGCGATAATGGCTTGAATGTCAGAGGAGGAAAACCAGATGACATCACTGTTCTGCTGTCAATTGTAGCAGAGTACACAGACTAATGCTCACAAGGGCTGCAAAATGCTTCTCTTGTTGTCTTCCTCAGTCACTGGACTGGCGGCTGTTTCCTGCTGGCAGGATTGAGGGCTGTTTGAGTTTTCTGTTTCTGGCAGCCCACATCTGTTCCTTGGATTCTTCGGCCTTACTAGaccatattttaaatgatgtcgTCTTCGGGCTAAAGTCAAAGACAACCTTGATACGGACTGTGAACATGGAGTTGTGTTTGACAAGGGCTACAACTGGTGTTGAACACTTCTCCAGTAAGAATCGCTAGCGTTTCTGTCGGCCAGTGATGAATTAGTTGGTGATGATAAGGTTGTGAGGCCAAAAATGGAGAAGGAATGAGCAAGAAAGGAATAACAATCTGATTAGGGACAGGCATCCCAAAAAAGAAAGTTCCTGTATCAAGAAGAACATGGGGGTGTCATGCAGTAGGAGTGTTTGCAAAAGGCCAATGAGACATGTGCTCAAGTTACACGAGTCTTGAGATGGCACGTTTTGCCTCTTTACtttccatttaaaaagacaCCCGATCTGTAACCTCTGGATAGCCATTGACTGAATGCCAGCTGAGATGTGAAGTTGATAGGCACGAATGACTACTACAGACTTTTCACTAGCTAATGAAGAGTTTGTATTTTGGGAAGTATATTGGGAATTCATTCGAGGCATAACTTTACAGTAATAGATCATGAAGCTTAACAACATCGAAATACTGTCAAAGTTAACAATCAACCATAGAAATGCCTTTCTTTTGAGATATTAATTAGGGGAGGCAGAACAAGTTCTCATTACTCAAAATCAGAGTTGGATGGGTGTTTTAAGTGATTAAAAGTAGAGGGCAAATTACAGTTTGCTTGGGATGACGGAAACCTTttcctttaatatttattaatttaaaacagtattaCTCCAACTTTTTGAgtttttaacataattacaGCAGTACAACAGACTGCAAGGGATTGTGGGATGTGCCGAGAGGAAAAGCAGTCCCACTTAAACCACTTTTGAGAGGTTCACATGCTTgtggtgtgtgcgtgtgtgtgtatgtgagaggaACGTTTACGATGTGTAGATATTTGGACAACCGGCTGTATATTTATGACATGTATGCATTTGTAAAGTGTAGGCTATTACACAACAGATGTATATGAGAATATATTTGATAATTGTGTGGATtctgtgttaaaatatttttcttgcttttttttttttttttttgtaaaatttaattttaaaatatcccTCAAGGTGTTTACGCACAAAGCTAATGCTAGCATCTGTGAATGCTTTCCGTGGGTATGTCATGGATCAAATGATCtaataaagttatatttttataa

Function

symbol description
pptc7a Predicted to enable metal ion binding activity; protein serine phosphatase activity; and protein threonine phosphatase activity. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion. Orthologous to human PPTC7 (protein phosphatase targeting COQ7).

NR:

description
PREDICTED: protein phosphatase PTC7 homolog

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0046872 metal ion binding molecular_function
GO:0004721 phosphoprotein phosphatase activity molecular_function

KEGG:

id description
K17508 PTC7, PPTC7; protein phosphatase PTC7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247826.1 True 2544 mRNA 0.46 6 2804285 2813140

Neighbor

gene id symbol gene type direction distance location
myl2b myl2b,myl2,LOC107699636,LOC101071916,LOC103044021 coding upstream 1991 2795108 ~ 2802294 (+)
LOC122350791 LOC107715152,LOC100333880,LOC107699660 coding upstream 194709 2560353 ~ 2609576 (+)
rab35b rab35b,rab35,LOC107699662,LOC107671023,LOC108430363 coding upstream 285403 2510789 ~ 2518882 (+)
gcn1 gcn1,LOC107552181 coding upstream 296171 2465043 ~ 2508114 (+)
pxnb pxnb,LOC107670974,LOC107699663,LOC107752988,LOC107553049,LOC107754409,LOC107552183,LOC102784766 coding upstream 339903 2431894 ~ 2464382 (+)
srrd srrd,LOC107699635,LOC107714588 coding downstream 11132 2824272 ~ 2826296 (+)
cldn5a cldn5a,LOC107713023,LOC107552167,LOC107714561,LOC107553040,LOC107699651,LOC107670982 coding downstream 99552 2912692 ~ 2913737 (+)
ufd1l ufd1l,LOC107670987,LOC107713022,LOC107553030,LOC107699633,LOC107552148,LOC107714583 coding downstream 117114 2930254 ~ 2933505 (+)
tmem127 tmem127,LOC107552193,LOC107713035,LOC107699648,LOC107671030,LOC107714579,LOC106579884 coding downstream 126123 2939263 ~ 2943205 (+)
LOC122350330 LOC107553039,LOC107714575,LOC107670999,LOC107552195 coding downstream 130141 2943281 ~ 2947349 (+)
G60369 NA non-coding upstream 170270 2632717 ~ 2634015 (+)
G60361 NA non-coding upstream 192058 2610317 ~ 2612227 (+)
LOC122351006 NA non-coding upstream 245237 2557030 ~ 2559048 (+)
G60347 NA non-coding upstream 280151 2520830 ~ 2524134 (+)
G60342 LOC107552179,LOC107552180,LOC107670991,LOC107754429,LOC107552177,LOC107670988,LOC107682543 non-coding upstream 382068 2408095 ~ 2422217 (+)
G60452 NA non-coding downstream 139876 2953016 ~ 2953994 (+)
LOC122349907 NA non-coding downstream 185767 2998907 ~ 3000982 (+)
G60660 dpysl2a,LOC107552153,LOC107713031,LOC107671020,LOC108266046,LOC108430340,LOC107560268,LOC103154404 non-coding downstream 242287 3055427 ~ 3056019 (+)
G60661 NA non-coding downstream 243159 3056299 ~ 3057846 (+)
G60668 bnip3la,LOC107552154,LOC107714550,LOC107699644,LOC107560275,LOC107671016 non-coding downstream 263736 3076876 ~ 3080723 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 764449 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 768305 2030824 ~ 2035980 (+)
polb polb,LOC107670984,LOC107722860 other upstream 784251 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 885914 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 1585481 1210815 ~ 1218804 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1035474 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1111721 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 1216163 4029303 ~ 4073897 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 2291430 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 2413812 5226952 ~ 5229608 (+)

Expression


Co-expression Network