G34216


Basic Information

Item Value
gene id G34216
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15928501 ~ 15928750 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38780
CGCGTCTTGCCAGGAGATGGCGCCCGCAGCTGAATCAATCATCCATTCATTTTCCAAACCGCGCTGGTCCAGCATTATCATACAGGTATAAATTCCTTTTTAATTAATCATTAAATCGTTTAAAAGGTTTGAACATGCTAGTTCAACATAAATATTCATTACTACTGGAGCTGCCAGTTTGCTACATTTCAAAAGATTATTAAACAGCAGCACAAACTATGCGAAATCGGCAGCCCTTCCGGTGCACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38780 True 250 lncRNA 0.37 1 15928501 15928750

Neighbor

gene id symbol gene type direction distance location
CI01000004_15906907_15909647 HNRNPC coding upstream 18832 15906907 ~ 15909669 (+)
CI01000004_15892502_15900203 DCAF8 coding upstream 27649 15890373 ~ 15900852 (+)
CI01000004_15867404_15875293 NA coding upstream 53197 15866985 ~ 15875304 (+)
CI01000004_15859240_15861471 APOL1 coding upstream 65052 15859240 ~ 15863449 (+)
CI01000004_15825817_15827475 TEP1 coding upstream 100898 15825817 ~ 15827603 (+)
CI01000004_15930478_15944692 NA coding downstream 1728 15930478 ~ 15944744 (+)
CI01000004_15947153_15953245 NA coding downstream 18403 15947153 ~ 15953870 (+)
CI01000004_16008731_16013012 NA coding downstream 79865 16008615 ~ 16013049 (+)
CI01000004_16017111_16024481 SALL2 coding downstream 88235 16016985 ~ 16024782 (+)
CI01000004_16037124_16044487 MMP14, MMP14A, MMP14B, MT1-MMP coding downstream 108374 16037124 ~ 16044563 (+)
G34215 NA non-coding upstream 4005 15923704 ~ 15924496 (+)
G34214 NA non-coding upstream 7615 15920683 ~ 15920886 (+)
G34213 NA non-coding upstream 40967 15887278 ~ 15887534 (+)
G34205 NA non-coding upstream 85099 15843132 ~ 15843402 (+)
G34196 NA non-coding upstream 147877 15779675 ~ 15780624 (+)
G34228 NA non-coding downstream 86156 16014906 ~ 16015106 (+)
G34229 NA non-coding downstream 90513 16019263 ~ 16019489 (+)
G33830 NA non-coding downstream 229962 16158712 ~ 16160998 (+)
G34266 NA non-coding downstream 251758 16180508 ~ 16180849 (+)
G34297 NA non-coding downstream 372483 16301233 ~ 16309306 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 836532 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1891601 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3272790 12646838 ~ 12652570 (+)
G31865 NA other upstream 3733354 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 4260842 11666900 ~ 11667659 (+)
G34220 NA other downstream 10607 15939357 ~ 15939950 (+)
G33815 NA other downstream 134665 16063415 ~ 16066464 (+)
G34400 NA other downstream 1048578 16971995 ~ 17025976 (+)

Expression


Co-expression Network