Gene
RNA
| Item | Value |
|---|---|
| gene id | G34229 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 16019263 ~ 16019489 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU38794 | True | 227 | lncRNA | 0.40 | 1 | 16019263 | 16019489 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_16008731_16013012 | NA | coding | upstream | 6214 | 16008615 ~ 16013049 (+) |
| CI01000004_15947153_15953245 | NA | coding | upstream | 65393 | 15947153 ~ 15953870 (+) |
| CI01000004_15930478_15944692 | NA | coding | upstream | 74519 | 15930478 ~ 15944744 (+) |
| CI01000004_15906907_15909647 | HNRNPC | coding | upstream | 109594 | 15906907 ~ 15909669 (+) |
| CI01000004_15892502_15900203 | DCAF8 | coding | upstream | 118411 | 15890373 ~ 15900852 (+) |
| CI01000004_16037124_16044487 | MMP14, MMP14A, MMP14B, MT1-MMP | coding | downstream | 17635 | 16037124 ~ 16044563 (+) |
| CI01000004_16090188_16090874 | NA | coding | downstream | 69937 | 16089426 ~ 16090928 (+) |
| CI01000004_16117960_16125599 | DHRS1 | coding | downstream | 98395 | 16117884 ~ 16125874 (+) |
| CI01000004_16138496_16143438 | NA | coding | downstream | 119007 | 16138496 ~ 16144117 (+) |
| CI01000004_16217935_16218580 | NA | coding | downstream | 198364 | 16217853 ~ 16218580 (+) |
| G34228 | NA | non-coding | upstream | 4157 | 16014906 ~ 16015106 (+) |
| G34216 | NA | non-coding | upstream | 90513 | 15928501 ~ 15928750 (+) |
| G34215 | NA | non-coding | upstream | 94767 | 15923704 ~ 15924496 (+) |
| G34214 | NA | non-coding | upstream | 98377 | 15920683 ~ 15920886 (+) |
| G34213 | NA | non-coding | upstream | 131729 | 15887278 ~ 15887534 (+) |
| G33830 | NA | non-coding | downstream | 139223 | 16158712 ~ 16160998 (+) |
| G34266 | NA | non-coding | downstream | 161019 | 16180508 ~ 16180849 (+) |
| G34297 | NA | non-coding | downstream | 281744 | 16301233 ~ 16309306 (+) |
| G34322 | NA | non-coding | downstream | 429357 | 16448846 ~ 16449090 (+) |
| G34323 | NA | non-coding | downstream | 430191 | 16449680 ~ 16455626 (+) |
| G34220 | NA | other | upstream | 79313 | 15939357 ~ 15939950 (+) |
| CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | upstream | 927294 | 15091200 ~ 15097173 (+) |
| CI01000004_14036114_14036449 | KIAA0040 | other | upstream | 1982363 | 14035393 ~ 14039142 (+) |
| CI01000004_12646972_12652534 | NA | other | upstream | 3363552 | 12646838 ~ 12652570 (+) |
| G31865 | NA | other | upstream | 3824116 | 12192130 ~ 12197418 (+) |
| G33815 | NA | other | downstream | 43926 | 16063415 ~ 16066464 (+) |
| G34400 | NA | other | downstream | 957839 | 16971995 ~ 17025976 (+) |
