G34228


Basic Information

Item Value
gene id G34228
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16014906 ~ 16015106 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38793
AACAATTGTACTAGAGAGGTGCGAAAATAATGTGGGGGGAAAATACTCTGAACCCCAAGTGTATTTACAAAAAAAGACAAAAAAGTGTTAGGTTGTGCCATTGTCTTCCCTATAGGTTTTTAACATGTTATTCATGGACTACAACCATTGTCCAACTCATCAAACACACAAATTCACATCCTTGTGGTAGTTGTAGTCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38793 True 201 lncRNA 0.45 1 16014906 16015106

Neighbor

gene id symbol gene type direction distance location
CI01000004_16008731_16013012 NA coding upstream 1857 16008615 ~ 16013049 (+)
CI01000004_15947153_15953245 NA coding upstream 61036 15947153 ~ 15953870 (+)
CI01000004_15930478_15944692 NA coding upstream 70162 15930478 ~ 15944744 (+)
CI01000004_15906907_15909647 HNRNPC coding upstream 105237 15906907 ~ 15909669 (+)
CI01000004_15892502_15900203 DCAF8 coding upstream 114054 15890373 ~ 15900852 (+)
CI01000004_16017111_16024481 SALL2 coding downstream 1879 16016985 ~ 16024782 (+)
CI01000004_16037124_16044487 MMP14, MMP14A, MMP14B, MT1-MMP coding downstream 22018 16037124 ~ 16044563 (+)
CI01000004_16090188_16090874 NA coding downstream 74320 16089426 ~ 16090928 (+)
CI01000004_16117960_16125599 DHRS1 coding downstream 102778 16117884 ~ 16125874 (+)
CI01000004_16138496_16143438 NA coding downstream 123390 16138496 ~ 16144117 (+)
G34216 NA non-coding upstream 86156 15928501 ~ 15928750 (+)
G34215 NA non-coding upstream 90410 15923704 ~ 15924496 (+)
G34214 NA non-coding upstream 94020 15920683 ~ 15920886 (+)
G34213 NA non-coding upstream 127372 15887278 ~ 15887534 (+)
G34205 NA non-coding upstream 171504 15843132 ~ 15843402 (+)
G34229 NA non-coding downstream 4157 16019263 ~ 16019489 (+)
G33830 NA non-coding downstream 143606 16158712 ~ 16160998 (+)
G34266 NA non-coding downstream 165402 16180508 ~ 16180849 (+)
G34297 NA non-coding downstream 286127 16301233 ~ 16309306 (+)
G34322 NA non-coding downstream 433740 16448846 ~ 16449090 (+)
G34220 NA other upstream 74956 15939357 ~ 15939950 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 922937 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1978006 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3359195 12646838 ~ 12652570 (+)
G31865 NA other upstream 3819759 12192130 ~ 12197418 (+)
G33815 NA other downstream 48309 16063415 ~ 16066464 (+)
G34400 NA other downstream 962222 16971995 ~ 17025976 (+)

Expression


Co-expression Network