CI01000006_03412397_03437333 (MARK2A)


Basic Information

Item Value
gene id CI01000006_03412397_03437333
gene name MARK2A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3412397 ~ 3437710 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03412397_03437333.mRNA
TCTCTTCCTTTTTCTACCTCACTCTTCATCTCTGCCTCCCTCTGCATGTCTGCTTAGTGTGAGAATCAGATGGCGACTGGCGACAGTCCTATCCAATCAGAATCACTCGAGCTCTGATAAGGATATTATTAAAGCAGTGCTCTGCAAACCTCCCATCTGTGCTTTTAGGTTCAACCTTCATAACTGTTACCAGTCTCACTCCGATTCAAAGCGCTGCAACATGCCCCACTCCACAGCAGACGAGCAGCCACACATCGGCTGCTACAGGCTCCTGAAAACCATCGGCAAAGGCAACTTCGCCAAGGTCAAACTGGCCAAGCACATCCTCACTGGCAAAGAGGTGGCGGTGAAAATCATAGACAAAACTCAGCTCAATTCCTCCAGTCTTCAAAAGCTATTTCGGGAAGTGAGGATCATGAAGCTCTTGAATCACCCAAATATCGTGAAGTTATTTGAAGTGATTGAGACAGAGAAGACTCTCTACCTGGTGATGGAATATGCCAGCGGAGGTGAGGTGTTTGATTACCTCGTAGCCCACGGCAGAATGAAAGAGAAAGAGGCCCGAGCCAAATTCAGACAGATTGTGTCAGCAGTGCAGTACTGTCACCAGAAGTGCATTGTCCACAGAGACCTGAAGGCAGAAAACCTGCTACTGGATGCAGACATGAACATAAAAATAGCAGATTTTGGCTTTAGTAACGAGTTCACACTGGGCAACAAGCTGGATACTTTTTGTGGCAGCCCTCCATATGCTGCCCCCGAGCTCTTTCAGGGGAAGAAGTACGACGGGCCGGAGGTGGATGTCTGGAGTCTTGGGGTCATACTATATACACTGGTCAGCGGTTCTTTACCGTTTGATGGACAGAACCTAAAGGAGCTGCGAGAACGCGTTTTGAGGGGCAAGTACAGGATTCCCTTCTATATGTCGACCGACTGTGAGAACTTACTGAAGAAATTCCTCATACTCAACCCAACCAAGAGAGGGAGCCTTGAGCAGCAGATCATGAAGGACCGGTGGATGAACGTGGGCCATGAGGATGATGAGTTGAAGCCCTACATCGAGCCCCAACCTGACTACAAGGACCCTAAGAGGACAGGTCAGCACCCCAGCTGTGCAGGGGGTTGGAAGAGAGGTGGGGCAGACGTGGCCCGGGGCTTTGGTGATATTATGCTACGAATGGGATACTCTTTAGAAGAGATACAAGACTCCCTTATCAACCAAAAATACAATGATGTCATGGCAACATACTTATTATTGGACTATAGGAACTCAGAGCTGGATGAACTATCAATAAAACCACGCCTAAGCACTGACCTCACAAACAACACCCAATCACCTTCTCACAAGGGACAACGCAGCACCTCCAATCAGAAGTCCCGCAGATCCACAGACCAAAGCTCCTCCGTTTCCACCAAGCGTCCTCAGGGCGACAGTAAGCACATTGCCAGTTCAAGCAGCTCCAGTAAAGTCCCTCCCAGCCCGCTGATCTCTGGAGACCATAAGAAAACTCCTACCCCTTCCACTAACAGCATCCTGTCCTCAGGCACCAGCCGCAGCAGGAACTCTCCAATCACTGAGAGAGCTACTCTAGGAGTACAGAACGGCAAGGACAGCACAGCCAACCAGAGAGCACCAGTTGTGTCCCCCTCAGCTCAGAACATAAACATTTCCTCAATGGCTGACCGTACCAACTTCCCCAGAGGGGTGACGAGCAGAAGCACTTTCCACGCCGGCCAGCAGAGAGCCACACGAGACCAGCAAGCCTCAGCATACAACGACCCCTCTGCCTCCCCCTCCCTTTCCCATGGCAACAGCCAGGTGCGCCGTCCCGGGACGGGTATCTTCAGCAAGTTTACTTCCAAATTTGTACGCAGGAGTCCGTATGAGGGAGAGGGTCGAGATGAGGCCAGCAGACCCATGTTGAGCACAGCAGACAAGATGGAGAAAGGTACCCAGGGACTGCCAGGCGACGAAAACAAGGACTCCTTCTCTTCGTCTTCTCCAGCGTCCAGCACACCCTCATCCACCCAAGCCTCCAAGGACACCAAGCCACGCTCCCTTCGCTTCACCTGGAGCATGAAGACCACCTCCTCCATGGAGCCCAACGAAATGATGAAGGAGATCCGGAAAGTTCTGGACTCCAACAGCTGCGAGTACGAGTTGCGTGAGCGCTTCATGCTCCTCTGCGTTTCGGGCATCCCTGCGCATGACGACTTCGTCCAGTGGGAGATGGAGGTGTGCAAGCTACCTCGCCTCTCTCTCAACGGGGTGCGTTTCAAGAGGATCTCTGGAACATCCATCGCCTTCAAGAACATCGCCTCAAAGATCGCCAATGAGCTAAAACTGTGAGGAAGTCGATCGTTTCTGTGGAAAAGATCTTGGGGAATGGCCCTTATGTTGGGTGTGAGGAGGCACTGTGAGGAAAATCATTGGATTTGTGAGCTCTACGGCAGCAATGAAGAGTCTTGAGGCTGAAAAGGGGGAAAGGTGTAAGACAGGTTCATGGGGGACATTTGTGCATATAGACATATTTCAGGGGGTTTATTTTTTTGGGGAGGTGTTCTGTCTTGGTTTGGGTTTTCTGTTCCTTTCTCACCCTCCTCGAATACTTTGTGTTGTCATCTTTATTTTTGGCAGTTTCATTCAAATGTTGTGGTTTTTCTTGGACCTCACAATTGTCCTCAGTTCAGAAAGAGTTTATAGAGCGCAAGAAGAGGTTGGCGTTA

Function

symbol description
mark2a Predicted to enable protein serine/threonine kinase activity and tau-protein kinase activity. Predicted to be involved in intracellular signal transduction and microtubule cytoskeleton organization. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in dendrite. Predicted to be active in cytoplasm. Orthologous to human MARK2 (microtubule affinity regulating kinase 2).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K08798 MARK; MAP/microtubule affinity-regulating kinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03412397_03437333.mRNA True 2727 mRNA 0.51 17 3412397 3437710

Neighbor

gene id symbol gene type direction distance location
CI01000006_03350988_03356496 NA coding upstream 55240 3350764 ~ 3357157 (+)
CI01000006_03327370_03334117 RIN1A coding upstream 77695 3327370 ~ 3334702 (+)
CI01000006_03319103_03319306 NA coding upstream 92877 3319103 ~ 3319520 (+)
CI01000006_03294091_03298089 SLC29A2 coding upstream 113726 3293988 ~ 3298671 (+)
CI01000006_03232003_03242938 NA coding upstream 169035 3232003 ~ 3243362 (+)
CI01000006_03441003_03442001 NA coding downstream 2946 3440656 ~ 3442955 (+)
CI01000006_03446979_03447865 NA coding downstream 9269 3446979 ~ 3447916 (+)
CI01000006_03483581_03526564 SLC8A4A coding downstream 45871 3483581 ~ 3527202 (+)
CI01000006_03548703_03554763 PPP1R14BA, PPP1R14B coding downstream 110993 3548703 ~ 3554763 (+)
CI01000006_03607868_03614573 LRFN4A coding downstream 169545 3607255 ~ 3614935 (+)
G41542 NA non-coding upstream 46830 3362995 ~ 3365567 (+)
G41526 NA non-coding upstream 53135 3357535 ~ 3359262 (+)
G41506 NA non-coding upstream 68117 3339239 ~ 3344280 (+)
G41555 NA non-coding upstream 76388 3268664 ~ 3336009 (+)
G41566 NA non-coding downstream 11740 3449450 ~ 3455035 (+)
G41519 NA non-coding downstream 94055 3531765 ~ 3533019 (+)
G41632 NA non-coding downstream 110248 3547958 ~ 3548175 (+)
G41634 NA non-coding downstream 121728 3559438 ~ 3559662 (+)
G41635 NA non-coding downstream 122058 3559768 ~ 3560079 (+)
G41591 NA other upstream 572976 2836167 ~ 2839421 (+)
G41424 NA other upstream 751827 2645662 ~ 2660570 (+)
G41170 NA other upstream 1716576 1692065 ~ 1695821 (+)
G40768 NA other upstream 2919371 488407 ~ 493026 (+)
G40767 NA other upstream 2929062 360009 ~ 484185 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 291520 3734554 ~ 3736035 (+)
G41996 NA other downstream 1679496 5117206 ~ 5124149 (+)
G43896 NA other downstream 2332379 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2670774 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2684325 6122035 ~ 6122751 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location