G41561


Basic Information

Item Value
gene id G41561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3712733 ~ 3772724 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47181
TTTTTTTGTTTTTTTTTTTTTGCAGTCATGAGGAAATGTTTATTGCAGTTTGAGTAACCATTACAAGTTATATCACATAACCATCGGAAGCAGGGATTTGTGCGATATACAGCCAAACTTGTGCGTTTTTCCCACCAAAACAGGAAGAATTAATTATTGCTCCAAATAAACTAGTTCCTTGCATGGGTTTCCCCCCAGCATATGCATTAGTGTTGTTGGGAATTTCCATTACACTGTTTTTGGAATGATAGTTGGGTAATTGGGTCAGTTACAATAGGGTGACTGACTATATGGAGTAAACTGGTTACATTCAGTAACTTAAATCTCAGTGAGAAAGCTTGAGGCCAAGCTGCAGGTCAGGCCTGTCCCATCAGGCTCCACATTGAGCTTTTTGACCACTCCATCTTCAATCAGCATGACATACCTGCACACACACACAATCAGGACCAGCAGAGGCAACTGAGACATTAAAGAGACATGGTTTTTTTTAGGAAGACTGTCATCTTACCTTTGAGACCTCAAATTTCCAAGCACCTGGAACAAATGGTCATTGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47181 True 557 lncRNA 0.40 3 3712733 3772724

Neighbor

gene id symbol gene type direction distance location
CI01000006_03607868_03614573 LRFN4A coding upstream 97798 3607255 ~ 3614935 (+)
CI01000006_03548703_03554763 PPP1R14BA, PPP1R14B coding upstream 157970 3548703 ~ 3554763 (+)
CI01000006_03483581_03526564 SLC8A4A coding upstream 185531 3483581 ~ 3527202 (+)
CI01000006_03446979_03447865 NA coding upstream 264817 3446979 ~ 3447916 (+)
CI01000006_03441003_03442001 NA coding upstream 269778 3440656 ~ 3442955 (+)
CI01000006_03808166_03810807 NA coding downstream 35361 3808085 ~ 3810807 (+)
CI01000006_03837017_03839129 NA coding downstream 64293 3837017 ~ 3839251 (+)
CI01000006_03858455_03862082 RCE1B coding downstream 85731 3858455 ~ 3862368 (+)
CI01000006_03883341_03885377 NA coding downstream 110065 3882789 ~ 3886026 (+)
CI01000006_03888048_03891012 NA coding downstream 114649 3887373 ~ 3891478 (+)
G41672 NA non-coding upstream 68494 3642819 ~ 3644239 (+)
G41637 NA non-coding upstream 144758 3567598 ~ 3567975 (+)
G41635 NA non-coding upstream 152654 3559768 ~ 3560079 (+)
G41634 NA non-coding upstream 153071 3559438 ~ 3559662 (+)
G41632 NA non-coding upstream 164558 3547958 ~ 3548175 (+)
G41716 NA non-coding downstream 3881 3776605 ~ 3776903 (+)
G41729 NA non-coding downstream 58180 3830904 ~ 3831126 (+)
G41732 NA non-coding downstream 67027 3839751 ~ 3840006 (+)
G41743 NA non-coding downstream 77069 3849793 ~ 3850026 (+)
G41499 NA non-coding downstream 77745 3850469 ~ 3853876 (+)
G41591 NA other upstream 873312 2836167 ~ 2839421 (+)
G41424 NA other upstream 1052163 2645662 ~ 2660570 (+)
G41170 NA other upstream 2016912 1692065 ~ 1695821 (+)
G40768 NA other upstream 3219707 488407 ~ 493026 (+)
G40767 NA other upstream 3229398 360009 ~ 484185 (+)
G41996 NA other downstream 1344482 5117206 ~ 5124149 (+)
G43896 NA other downstream 1997365 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2335760 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2349311 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 3394065 7166778 ~ 7168925 (+)

Expression


Co-expression Network