G43628


Basic Information

Item Value
gene id G43628
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 4433697 ~ 4437947 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU49541
CTGGGCGTGTAGGGCTCGTCTGGGGGAGGGGGGATGTAGAGGTCCTGTAGAGCGCAGCTGTCCCGTCTGGATGGGGTGCTGAGGGTGCTGGATGGTGTGGCCACACTGCTGCTGGGGCTGGGGGGGATGATGGGCTGCAGGGCGAGGGGCTTCCATCTCATGTTCTTGAGTAAGGCTGGGGCTGACGTGAGAGTGCTCTGAGGTCGTTTCTTCAGCGTGAGGGTCACACCCGCAGGATTGCTACGTAAAGAGTTTACCAGGTTCTTCAGCTGCCAGCCCACCACTGTCTGATGATTGACCTGTATGACCTCATCACCAGCATGGATTTTCTTACAGCGGTCAGCTAGCGATCCCTCTGTAGTGCCTGTGATGACATGTAGGCCATCATAGGTTGATTTAATG

Function

NR:

description
GATA zinc finger domain-containing protein 14-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49541 True 402 lncRNA 0.43 4 4433697 4437947

Neighbor

gene id symbol gene type direction distance location
CI01000006_04394840_04398849 NA coding downstream 33231 4394480 ~ 4400466 (-)
CI01000006_04339683_04341206 NA coding downstream 92491 4339505 ~ 4341206 (-)
CI01000006_04327754_04330520 NA coding downstream 103019 4327124 ~ 4330678 (-)
CI01000006_04322555_04322827 NA coding downstream 109336 4322468 ~ 4324361 (-)
CI01000006_04313539_04316100 NA coding downstream 117597 4313406 ~ 4316100 (-)
CI01000006_04480549_04481514 NA coding upstream 42245 4480192 ~ 4481514 (-)
CI01000006_04484340_04489922 OR132-5, OR132-1 coding upstream 45863 4483810 ~ 4489922 (-)
CI01000006_04524286_04525219 TMEM45B coding upstream 86032 4523979 ~ 4526098 (-)
CI01000006_04535347_04535742 SYCN coding upstream 97270 4535217 ~ 4535753 (-)
CI01000006_04549705_04556474 NA coding upstream 111596 4549543 ~ 4556516 (-)
G43588 NA non-coding downstream 31942 4401490 ~ 4401755 (-)
G43582 NA non-coding downstream 47217 4386280 ~ 4386480 (-)
G43578 NA non-coding downstream 49344 4383297 ~ 4384353 (-)
G43573 NA non-coding downstream 65080 4368400 ~ 4368617 (-)
G43546 NA non-coding downstream 65813 4367084 ~ 4367884 (-)
G43643 NA non-coding upstream 41461 4479408 ~ 4479622 (-)
G43610 NA non-coding upstream 63457 4501404 ~ 4504665 (-)
G43660 NA non-coding upstream 99637 4537584 ~ 4537817 (-)
G43664 NA non-coding upstream 124495 4562442 ~ 4562681 (-)
G43665 NA non-coding upstream 242667 4680614 ~ 4680828 (-)
G43549 NA other downstream 78269 4352510 ~ 4355428 (-)
G43102 NA other downstream 1499713 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 1807511 2624436 ~ 2626776 (-)
G42934 NA other downstream 1851491 2523776 ~ 2582206 (-)
CI01000006_02285649_02294759 NA other downstream 2138699 2284994 ~ 2296494 (-)
CI01000006_04560607_04560993 NA other upstream 121562 4559509 ~ 4562068 (-)
CI01000006_06974359_06976736 NA other upstream 2535277 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 3065198 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 6044909 10453613 ~ 10484006 (-)
G47658 NA other upstream 6592964 11030911 ~ 11033127 (-)

Expression


Co-expression Network