G41811


Basic Information

Item Value
gene id G41811
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 11393452 ~ 11393738 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU56224
TCAcagcttagcccatgtctgtcttgtgtttctccctcatttggtcccatgtgctcctgccctctgtttacctgtcatgtgtttcccagccatgtgcttctgttgtgttttggtcctgtctccgccctagccccaccctgtcatcagtgatttgtaaccccgccccctcttgattgatcctcaggtgtttccagtttcctgttccctcctcatgtatataagcccctttgtttcaagcgatctttgtctagtcttttgtgtGATACCttgctgtgtgtctgtcaggT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56224 True 287 lncRNA 0.49 1 11393452 11393738

Neighbor

gene id symbol gene type direction distance location
LOC103040147 NA coding downstream 7585 11374570 ~ 11385867 (-)
fstl3 fstl3,LOC107687713,LOC107728592,LOC107554822,LOC107569933,LOC107655223,LOC107719601 coding downstream 318617 11066044 ~ 11074835 (-)
LOC103035863 NA coding downstream 410665 10971381 ~ 10982787 (-)
ankmy1 NA coding downstream 423177 10939652 ~ 10970275 (-)
LOC103034388 NA coding downstream 641322 10749092 ~ 10752130 (-)
LOC103041169 yjefn3,LOC103041169,LOC108429551,LOC108271278 coding upstream 81110 11474848 ~ 11550249 (-)
LOC111192506 LOC108429549,LOC108271147 coding upstream 170264 11564002 ~ 11600074 (-)
hapln4 hapln4,LOC107728536,LOC107599484,LOC107719665 coding upstream 707500 12101238 ~ 12112265 (-)
LOC103045149 LOC108429540 coding upstream 727271 12121009 ~ 12141472 (-)
rabgap1l rabgap1l,LOC106574055,LOC106613570,LOC107715121,LOC107728556 coding upstream 1045136 12438874 ~ 12589048 (-)
G41809 cirbp,LOC107719610,LOC107655227,LOC107599461 non-coding downstream 21745 11336777 ~ 11371707 (-)
G41778 midn,LOC108429554,LOC108271022,LOC107687715,LOC107655225,LOC107599463,LOC107554818 non-coding downstream 160641 11197714 ~ 11232811 (-)
G41752 NA non-coding downstream 186028 11109916 ~ 11207424 (-)
G41755 NA non-coding downstream 289304 11103907 ~ 11104148 (-)
G41681 NA non-coding downstream 529543 10863609 ~ 10863909 (-)
G41862 NA non-coding upstream 296165 11689903 ~ 11717048 (-)
G41864 tmem161a,LOC107599454,LOC107719614,LOC107728546,LOC107554814 non-coding upstream 303793 11697531 ~ 11703225 (-)
G41865 tmem161a,LOC107728546,LOC107687722,LOC107554814,LOC107599454 non-coding upstream 310453 11704191 ~ 11709303 (-)
G41876 NA non-coding upstream 358333 11752071 ~ 11752303 (-)
G41877 NA non-coding upstream 359710 11753448 ~ 11753747 (-)
G41767 atp5d,LOC102779772 other downstream 235617 11150669 ~ 11157835 (-)
G41763 cbarp other downstream 248291 11126385 ~ 11145161 (-)
LOC103036175 tpm4,tpm4a,LOC103036175,LOC108424981,LOC107561904,LOC107665514,LOC107715082,LOC107757474,LOC107653617 other downstream 377367 10985184 ~ 11016085 (-)
G41551 NA other downstream 1122632 10270336 ~ 10270820 (-)
G41543 NA other downstream 1167626 10163460 ~ 10225826 (-)
LOC103040665 cilp2,LOC107728576,LOC107655229,LOC107687716,LOC107599460 other upstream 43914 11437652 ~ 11469878 (-)
LOC103041480 NA other upstream 224706 11618444 ~ 11679019 (-)
mef2b mef2b other upstream 326388 11720126 ~ 11731896 (-)
borcs8 borcs8,LOC107599453,LOC107554813,LOC107728595 other upstream 362709 11756447 ~ 11762261 (-)
nr2c2ap nr2c2ap,LOC107554809,LOC107687739,LOC107728548 other upstream 373960 11767698 ~ 11773102 (-)

Expression


Co-expression Network