G80320


Basic Information

Item Value
gene id G80320
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 13366770 ~ 13367094 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU108200
cgtttttttgtagctggagattgctctccggagtccaagctctctagagcttagattctctgcccgaacccgacatgacccgaggcccgcccgtaaatccgacccgggctccagaaaatagtccgagatgtaggcgtctgttttttaattatatttttatttaaaaaaaaaaataacgaaaactgaaagtgaaactaaactaatttatttataagcgctgttttcactaccgcagttctacagcgggggtgttgtgccgattctgtccgcgaagcgggagtcagattcagcagagagtcggattcggcacaaacgcggcggcacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108200 True 325 lncRNA 0.47 1 13366770 13367094

Neighbor

gene id symbol gene type direction distance location
LOC103022962 NA coding downstream 178838 13181021 ~ 13187932 (-)
thumpd2 NA coding downstream 216095 13139454 ~ 13150675 (-)
LOC103026300 map4k3,LOC105006890,LOC107715980,LOC107654892,LOC105893436 coding downstream 230791 13092731 ~ 13135979 (-)
znf593 znf593 coding downstream 318196 13039037 ~ 13048574 (-)
LOC103025372 LOC103025372 coding downstream 399135 12956370 ~ 12967635 (-)
LOC103026512 LOC108431645 coding upstream 441007 13808101 ~ 13819661 (-)
slc22a15 slc22a15,LOC107676332 coding upstream 674849 14041943 ~ 14055991 (-)
kif11 kif11,LOC107553611,LOC104965006,LOC102789789 coding upstream 690265 14057359 ~ 14074419 (-)
LOC103028326 phyhipla,LOC108431655,LOC108270363,LOC107733545,LOC107663293,LOC107671145,LOC107553031 coding upstream 1170158 14537252 ~ 14566205 (-)
LOC103029905 LOC108431656 coding upstream 1207454 14574548 ~ 14635052 (-)
G80295 NA non-coding downstream 93654 13272803 ~ 13273116 (-)
G80288 NA non-coding downstream 100240 13259462 ~ 13266530 (-)
G80269 NA non-coding downstream 187843 13176858 ~ 13178927 (-)
G80258 NA non-coding downstream 220072 13146252 ~ 13146698 (-)
G80253 NA non-coding downstream 227884 13138616 ~ 13138886 (-)
G80333 NA non-coding upstream 39090 13406184 ~ 13406407 (-)
LOC111193199 NA non-coding upstream 101092 13468186 ~ 13477658 (-)
LOC111193200 NA non-coding upstream 366953 13734047 ~ 13736984 (-)
G80455 NA non-coding upstream 435282 13802376 ~ 13844087 (-)
G80461 NA non-coding upstream 464582 13831676 ~ 13832542 (-)
LOC111193198 NA other downstream 190094 13176036 ~ 13176676 (-)
selenon selenon,sepn1 other downstream 329464 13021117 ~ 13037306 (-)
LOC103046962 ptena,LOC108411875,LOC107670848,LOC101171856,LOC105900832,LOC105940225,LOC104929647,LOC103387686 other downstream 454375 12871989 ~ 12912395 (-)
edaradd edaradd other downstream 753039 12585162 ~ 12613731 (-)
ncmap NA other downstream 993966 12334399 ~ 12372804 (-)
LOC103027799 rgs7a,LOC108431643,LOC107583631,LOC107668625,LOC107750853,LOC108269497 other upstream 458973 13826067 ~ 13919850 (-)
LOC111193139 NA other upstream 588747 13955841 ~ 13956580 (-)
LOC103028126 LOC108431632 other upstream 601511 13968605 ~ 13979750 (-)
G80522 rpl13a,LOC107670882,LOC107583572,LOC107583227 other upstream 747030 14114124 ~ 14117650 (-)
LOC103031386 banf1,LOC108431661,LOC108270073,LOC106576720,LOC104936919,LOC105900308 other upstream 1358809 14725903 ~ 14728757 (-)

Expression


Co-expression Network