CI01000009_02799246_02827589


Basic Information

Item Value
gene id CI01000009_02799246_02827589
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2799031 ~ 2827640 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_02799246_02827589.mRNA
CTTTAACAGGGAAAACAGGTCCTCTATCGCCACAGGGAAGACTTACTGACCCCTCTATTGTTCCTCCACCTTCCCAGAGAAATGTCCCACAATGGGATCCTCTGAATTAAGACTTAAACCACTCTGGCATATTTCAACATGTCTAGCCAACCATGGCAACAAAAGTGCTCATGTAGCCGGCATTTCTCATTTCCTGAGCACCTCTCCAAACAGGCATGTTTGGCCAGTCTGGCTATTACCATAGCAAAAAAATTGTGTTTATAACTGTACGTGTCTACACATACATAAAGCTCAAATTAGTCTCCAGAGGCAAGGATGACCTCTTTTTCTGGTGCTTTGTATATCATACTGCGAGTGGCAAGGCCCTGTTTTATTGTCAAGGGAGTGTTTCACACTGCAGAGTGCCTATAGGTGTATGTTTTATACTGCTCTCTATCACTCAAGGAGACCATTACGACCTGATTAAACCAGCTCCAGACTCCAAAGACAGGGGATTGTGGGAAAATCACACCTTCTTAATATGCTCAATTTTAACTGCCCTGAAGAACAACACTGAGATAGTCAATTTAAAAGACAGGCGGATGGGTTTTTTCAGACTTGATTTTGATGGACCACTGCACACAGTTGAAGGAAGAAAATGGAAAACAAACCCTCAAAACCCATTATGCCCTCTGGCATGTATAATGAAGACATTGCAGCAATTATTAAACACAGACCAGGAAGATGATAAGTATAAACGAAGACAGGCTTTACTGAACACAGTGGTAATTGCAATGATGGATATGGAATGTGATTGCAGCAGGATGGACACAGAACAGAAATGTCAGAGCTCCCCAAGTGGTTTTCACCTTGTCAGTGGCAACAATGGCTACTGGAATATGGAGACAAGATCAGCTCAGAACAGTCAGGCCAATGATGCAGCCTTTGGAACGGCCAGTACAGATATTCATTCCACTCTTCCTGTTCTGTACACAGCATGTGCTGTACAGCAGTCAAATCCAGAATCGTCTAAGGCTGACATCATCAAATACATAAAGAGCTATCTCCGATCAGCTCCCGACAGATATGGGGGTATGGGACGCCAGAAGGGCCAGACAGCCATTGATCTTTGTTCTCAATCAGAATAGGTGCATTTTTGTTTTTATTTACATTTGTATTATTGATTTGAAGTTTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_02799246_02827589.mRNA True 1178 mRNA 0.43 4 2799031 2827640

Neighbor

gene id symbol gene type direction distance location
CI01000009_02713403_02713914 NA coding upstream 85033 2712958 ~ 2713998 (+)
CI01000009_02674026_02678655 NA coding upstream 120285 2673802 ~ 2678746 (+)
CI01000009_02667840_02668883 NA coding upstream 129867 2667442 ~ 2669164 (+)
CI01000009_02656782_02657768 NA coding upstream 141208 2656557 ~ 2657823 (+)
CI01000009_02615073_02617401 NYX coding upstream 180836 2614656 ~ 2618195 (+)
CI01000009_02918681_02973307 KDM6A coding downstream 91041 2918681 ~ 2973952 (+)
CI01000009_03123137_03137452 CCDC80 coding downstream 294476 3122116 ~ 3138311 (+)
CI01000009_03145417_03159851 F5 coding downstream 317777 3145417 ~ 3159914 (+)
CI01000009_03164135_03169470 GPR161 coding downstream 334678 3162318 ~ 3170140 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S coding downstream 374567 3202207 ~ 3208984 (+)
G51394 NA non-coding upstream 165169 2631777 ~ 2633862 (+)
G51384 NA non-coding upstream 177844 2554739 ~ 2621187 (+)
G51368 NA non-coding upstream 370709 2428122 ~ 2428322 (+)
G51354 NA non-coding upstream 373748 2415700 ~ 2425283 (+)
G51272 NA non-coding upstream 397664 2401033 ~ 2401367 (+)
G51388 NA non-coding downstream 12770 2840410 ~ 2844319 (+)
G51495 NA non-coding downstream 73834 2901474 ~ 2901723 (+)
G51496 NA non-coding downstream 74307 2901947 ~ 2902312 (+)
G51500 NA non-coding downstream 79726 2907366 ~ 2907596 (+)
G51501 NA non-coding downstream 81932 2909572 ~ 2909938 (+)
G51274 NA other upstream 448545 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 897605 1897343 ~ 1919516 (+)
G51122 NA other upstream 1117065 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 1360676 1429873 ~ 1435328 (+)
G50920 NA other upstream 2028798 769841 ~ 770233 (+)
G51529 NA other downstream 234393 3062033 ~ 3062587 (+)
G53388 NA other downstream 2694602 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3032662 5931718 ~ 5943899 (+)
G53651 NA other downstream 3417924 6245564 ~ 6248392 (+)

Expression


Co-expression Network