G14506


Basic Information

Item Value
gene id G14506
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 29730164 ~ 29730572 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19459
CAACAATAAGACAAAGACGAGACAAGACAAAGATAAGGCAAGACAAGGACAAAACAAGGACAAGacaaagacaagacaagaaaaaaataagacaagacaaggacAAAACATGGACAAGAAAAAGgcaaagataagataagataagacaagaaCAAAACAAGGACTAAACAAAGATAAGAcaaggacaagacaagacaaagatAAGACAAAGACAAGACCCAGACCAGGACAAGGACAAGGACAATTTTTTAGCATGCTgcaaatttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19459 True 268 lncRNA 0.39 2 29730164 29730572

Neighbor

gene id symbol gene type direction distance location
atf7ip2 atf7ip2 coding upstream 119779 29593896 ~ 29610385 (+)
c2h16orf72 cunh16orf72,c2h16orf72,zgc:66160,LOC103025273,LOC105900007,LOC107590581,LOC107738628,LOC107685917 coding upstream 721779 29000911 ~ 29008385 (+)
LOC103024010 LOC106597007 coding upstream 766341 28951471 ~ 28963823 (+)
LOC103022544 pde6g,LOC108432842,LOC107733865,LOC107690252 coding upstream 827660 28901023 ~ 28902504 (+)
LOC103022852 arhgdib,gdir2,LOC108432841,LOC107590585,LOC107685923,LOC107568023,LOC106601960 coding upstream 839235 28828602 ~ 28890929 (+)
clec16a clec16a coding downstream 31406 29761978 ~ 29864484 (+)
pigq pigq,LOC107690265,LOC107733876,LOC107590576 coding downstream 164980 29895552 ~ 29907786 (+)
rab40c rab40c,LOC107567894,LOC107685905,LOC107590575,LOC103366693,LOC107690266 coding downstream 182670 29913242 ~ 29942259 (+)
LOC103042681 xylt1,LOC108439755,LOC107690267,LOC107567884,LOC107729195,LOC107590574,LOC107733871,LOC107686990 coding downstream 375285 30105857 ~ 30219133 (+)
c2h17orf75 cunh17orf75,c2h17orf75,zgc:153240,LOC107690268,LOC107729180,LOC107590573,LOC107567861 coding downstream 538616 30269188 ~ 30278439 (+)
G14502 NA non-coding upstream 51127 29678376 ~ 29679037 (+)
G14488 NA non-coding upstream 116391 29607878 ~ 29613773 (+)
G14483 NA non-coding upstream 307313 29405159 ~ 29422851 (+)
G14477 NA non-coding upstream 328913 29399304 ~ 29401251 (+)
G14481 NA non-coding upstream 332417 29395917 ~ 29397747 (+)
LOC111193871 NA non-coding downstream 11214 29741786 ~ 29742733 (+)
G14619 NA non-coding downstream 307912 30038484 ~ 30038697 (+)
G14625 NA non-coding downstream 343427 30073999 ~ 30074475 (+)
G14629 NA non-coding downstream 491995 30222567 ~ 30234151 (+)
G14642 NA non-coding downstream 548245 30278817 ~ 30279588 (+)
nubp1 nubp1,LOC107690260,LOC107685912 other upstream 9572 29674110 ~ 29720592 (+)
G14480 NA other upstream 331998 29395160 ~ 29398166 (+)
G14444 NA other upstream 600791 29129067 ~ 29129373 (+)
rbfox1 rbfox1 other upstream 1123075 28112046 ~ 28607089 (+)
LOC103031366 LOC105899914 other upstream 1652346 28050129 ~ 28077818 (+)
G14505 NA other downstream 2733 29733305 ~ 29742723 (+)
G14638 rps15a,MGC114789,RPS15A,LOC107686992 other downstream 530105 30260677 ~ 30268382 (+)
LOC103032125 NA other downstream 1008472 30739044 ~ 30772153 (+)
LOC103035097 fam193b other downstream 1430495 31161067 ~ 31177592 (+)
smim13 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 other downstream 2310463 32041035 ~ 32045063 (+)

Expression


Co-expression Network