LOC103037665


Basic Information

Item Value
gene id LOC103037665
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 26701559 ~ 26708772 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007237662.3
GACAGTATAAGAACCGGCGCTTTCATCTTATTGCATTTACATTACAATTCCTGTAGAGAAGACTTTCTACACACTACACTTCACAGCACTCCCAGAGAGGGGCCAACAGAAGATCTGTGCATCATTTGACTGAAATGTAAGATTTAAAGAGAAGCAAACACGCTGCCACCATGTCGATGTATCggcaaaaaaacactgagaaaggAACCAGGACTACAGAGATCGtGCGTGAGACTGACAGGGACAAACATGTTCTTCTGCAAATGCTGGATCTGCACAGACAGAAGGTGGATCCAGTTGACCTTATGCAAATGCTGTACCTCACTTCTTCCTGTGTAGAAGACAATGTACCCCAAAACCCGACAGAGTTGTCCACTGTGTTCTTGAGGCGCCTCTGGTTGTATCATCCACAGGCTCGCGACACTTCATGCGAGGTAGTGGCAGGAGCCTATACTGTGGCCAGACCCCCTGAAGTAGATGAGAGTTCTCAATGTGCCATCAACCCTTTGGACCTGGTGGCCGCGGTTTTCATGACTACAAACAGCTTTCTGCAGCAGGAGATCGCTAACAGAATGGTGCTCAGCCACTTTGCAGTGCCTCTGTATCTGCCGCCTGTTTATCCAGAGAAAAGAGGAACATTTCTCCTTAGTCCTTTCAGGGGTGTTCTGGGCAGGTGGAAGTCACACTCTTTGGACGAGTCCAGAAACATCATGAAGAACATGGCCAGTTCCAGAATGCCCTTCCTCTCTGCCGTGAGACTAGGCCACTGCAGTGTCTCAAAGTCACGCGTGTTGAACAGAGTGCTTGGGGGTTCACACGAGTTACATGAATGCTTCACAAATCGCAACACTGACGGAGGGCAGCTTCCTCGAATCCTCTCTGATGGCCTGATAGAGGTGAGTTGGAATTTGTCCATGGCAGATCAGGACAACAAGGTCTTCCCCAACCCCTTACTGATGGCCAATCTCCGGGGAGATGCAGCGGAATGTAATAAGCAGGTCAGCCTTCTGTGCTACGCCTCTGCAATCCTTCTGGTATTCTGTGGGAACCTGGGGATGAAGGAAAGAAAGCTGCTGTCTTCATGGAGGGATAATGCAAGCCATCTGATTCTAATTGACTGCTCAGAAGCAATGCAGGGAGATGCAGGAAGTGAGGAATGCGAACATGAAAAGATGAAGAACATCCTGATAAAAGATTTAGAACTTTCTGaagaatgtgtaattaatgcACATGATGGCAATGAAGAGAATCTGGCTTGGAGGTTAAGCTATGCAATGAACAAACTGGTTTCACATCTGCACCCGACAAATCTTGTGGCTGCTGCTGGTGTGGCCAGTGACCTCAACATGAAGGTTGATGAAGATGAACTCTCCCAAATGGCATTTACTGAGGTGGAAGAGGTCCTAAATGGAATTGAAAGTGGAGTCAGCAAGTTCTTGGAGGAACAACTGCCTCTACAAGGTCCTCGCTGGAAACAAttgtgtgatgttgagcagaaACAGGGTAAGCTTAAAGAAGACGTCCACCTGAGTCTGAGTCAGGAGTCCAGTGGGGGAAATAAAGGCTTAGTTGAGGAATTTATGAGTTACAAGTTAACTGAAGCTATGAAAACCTTCCTTGAGGCTCTCTTCACTTATGACACAACCAAGCGAGccttcttcctttcctggatgAGGGTCAAACTTCAAGTCATGCAGCTGGATAAACTCTCTGATACAGAGGAAGATCAGCAGCAGGGCCCGTGCATTGGACTTGAGCACTTCCTGCGTGAAATGGGGCTGATTTACGAGAGATATTTCCGTGGTCCTACCAATGAGTTGTACAATATGTTCAGCCTACCATATCTTGCTGCTGAGCTGCTACTCTATGGAGTTCCTCTGGAGCTCTTTGATGGAGACGCCTCAGTGTTCCCACTGAATTGGGTTTACAGCGTTCTGTATGAGGTCTACAAACAGGTGCCACAGAACAGTCGAATGAGAGTTTTGACAACCTTCGGCTTCCATGActcaaaaaatgcagagctactttcttctctttttggGGTAAGCTTCCCCAAATGGGGCCAAAGGCACATAAAAGGAGCATATATGCTTCTTCTTAGTTTACCTGACAACATCAGAATGCAGTTGGACTGTGAATTTCTGATACTAATTGTCACAGAGGGTTTGAATTTTTTGCATGCAGGACAAACTGAGGAGAGTCTTTTGCATGCTAATCAACTGGCAACCTTTGTCAGTGGATTAAGTGATGTTACACTGGTAAATTTACCACAAGAGGGCCTGGCTGGAACCCAAAATAATCTTCAGATTGCAGTGAATGCTGTTCTTCACACCAGGGACTTGCCAAGGAAACCTGACTTTCAAGTTGTTTCTGAAGGACCAGCAAAAGATGCCAAAATCCTGAGTTGTGTGATTGACATCCTAAATCAGAAGAAGTCTCTGGGTACTGAGGGAGGAAACATCAACCACAGCCTGGTTGGTCCATGGACAGACCAAAATCTCTTCTCAGAAACTGACCAAATATACAGTGATGCAGTTCTGGAGCTGAAGCAGAGCCTGCTGGCTGTATTACACAATAAGGCAACCACATGCCAACCAACATGCATGGGTGCATTTATGGAGCATATGTGCAATTTTTGGGAAACAGTGAAAAATCTAACATTTGCAACTGGCTTGGAAGACACACATGCAGCTGGTCCACTCATAGGTCTCTGCACAAAAGTTGTAGAAGGTGAGGAGCAACTTGGGCATAGAATAAAATGTTGGGTTGAAGGGCTGGATAACCGAATATCTGAATTGGAAGAATCAGCTTCGCAAAGTGGAGACTATGTTGATGATCCAGATGGCGTCCACAGAATCTTAGACGAAGAGGCAGCAATGCTAATAAATTCAGAAAGTGACAAACTTAAATCAAGCCTCTGGGATTACTTCAGACAGGAGGACATTGACATGGCCTTTGTAGAACCCTATAAATCAAATCTACTAGAAAGAGTCAGCTCCACAGAACAGCAAGCAGTGCATGGCCTTAACCCAAAGATTGAAACTGCTATAATCAGACATGACATGTCAGTAAAGATGCAAGCTTTGCTGACAGCTCTAGAAGCAGCCTTAGAGGTCAGGTTACGATCTCTTCTGGAGAGATGCAAGAACAATAACAATTTTATTGATGACAAACAACTTGAAGAAGAGTTTATTCAAGTTTGGAATGACATTCCCTCCAACCTCGAGCTCCTGCCTATTGAGACACATGAGATCCGTGCGAAAGTGATTGAGAAACTGAGAGAAAACTTACAAAGCCGTGGGCTGAAAAAGCAAAAAGTGAAACTCAGAAACCACCAGAATGGTTTCACAGTGAAGAATGGACATCTTGCTTTGCGTAGCAAAATGAAGCGAACACTGAAGCATAATAAGGAGGTTGCACAGAGGTTCACAGATAATTTGATTGAAGACTGTGATAAAAGAGTCTCTGAGAAACTAAAGCATAAGGAGGATTACTCTGACAGCTACATGAGAGAGATACTTGCAATTGTCGACAAGGGTTTAGAAGTTCTGAAAATGGAGTCATTCGTAATGAAACCCAAATTTGAGGCCGATCTTAAAGGGTATATCTGCAGCAAAGCAACAGAATCATTCCAAAACATGCAGAATCTacttaaaagagaaagagagacaaaggaaAATTTTCTCTACGAGACCCAGGAAAGACACCTGCTGGATTTTATTCACAATTTCCGCAGAAGGGACCAGTGCCAGAAAGCTGCCTGGGAATTCACTAATCAGTGCCTCAGACCTGCAGCTCTTGACTTCATCTACACAAGCTTAGAAAGACAGATTTTTGATGACATATTGCAGGGGGCCAACGGACATGTGTATTCATTGCCCAAGACTTTCCACTATCATCTTCTCAAGGAACTCTTGCTGGAGGACAACTTCGAGAAATTCCTAGAATACCTGCAGTCCAATGAGAGCTACTGTCGCAAGAGGATCGAGGGTATTATCGTTGAACATCTGTCTGGATCAGTGATGATAGAGGACCGGAGGGAGCAGCGTATGCAGCAAATCTGTCAACGAATGGAAAACTCTATTAACCTAATATCTGAAGATGGTGGCACAGGTCAGAGCAATGCCAGGCAGCTTCTGGAAAGTGTCTGTGCCGTCCTTCAGAGTCCTGGAGATGTTACAGTGTCCGCCGATTCCTTAAGGATGCCTCTGTTTGAAGTTATCCCACAGAGAGAGAACTTCATCACCCAGTTAAAAGAATGTGTGGCTGAGTTGTCGTTATCACTTGTCCAGGAGTTTGGAGAAAATGAGGATGTCATTGAAGTCCCAGAAGACCTTTCCTATAAGCTCCAAGACCTACTGTACGACCATATAAAGGGATGTGATGAGCAGTGTTCCATTCTGCAAAGCTCCGTGTGACCTGGGGGGAACAGAACATGCAGTGCACCAAGCCATCGTGCATCGACCCAAAGGACTGGTGTGTTACACCAACGCCGGTTCTACTTCCCTGTCCCATTTAACCTGCTCTGCTGAAATGGTTGGAGAGAACCAGTTTCAGAACAGGCACACTGGTGGACTGTCCTTACCCTACAAAGATTACCAATCCATCTACCCCAACTGGAATATCCCCCCTGAGTGGCCTAAAAATAATGAGACTGGAACATTCTGGAAGTACGTGTTCATGAGATACAACGCAAGGTTTGCTCAAAATTACCAGTGTGAGTCGGCCACAGTTCCTGAAGAATGGAAGAAAATTAGACAAGAGGACGCTCTGAGAAACCTGAAAAAAGCCTTTTCTATTAATGAGTGACATCAACTTTAATCATTGACCTTTACAAGTGATAGTACACTTAATGcaacacatatatatgtataggcATTTGTGTATGTATGAACAATCAAATTCTCTGTCTAAATGCTGTAGTATATTCTAAACAGTAAGTTAGAGTTTTTTAATCATGTAGCactgttctgttcttttctttagatAAGAATGCTAAATATCCAGTGATTAATGTAAACAGCAAGGACATAAATGAAATCACTTtggaattattatattttatattttttagcagCAACATCAGTGAAACCTGGAAAGGAATTATGAAACATAATCATAAAGTGCATCTGCATAATTGCACCTCAATACTATAGTGATTTTAAGGTAattctttaataaaacataaaatgtataaa

Function

GO:

id name namespace
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007237662.3 True 5198 mRNA 0.44 3 26701559 26708772

Neighbor

gene id symbol gene type direction distance location
dscaml1 dscaml1,LOC107752281 coding upstream 26544 26497552 ~ 26675015 (+)
mindy4b fam188b2,LOC107598659 coding upstream 872492 25816743 ~ 25829067 (+)
clrn1 clrn1 coding upstream 893067 25801597 ~ 25808492 (+)
LOC103023233 NA coding upstream 918512 25774795 ~ 25783047 (+)
LOC103022923 LOC103022923,LOC108426899 coding upstream 935774 25748629 ~ 25765785 (+)
pgam5 pgam5 coding downstream 250612 26959384 ~ 26964690 (+)
LOC107197223 NA coding downstream 351373 27060145 ~ 27103854 (+)
LOC111194302 NA coding downstream 395260 27104032 ~ 27112068 (+)
eef2kmt eef2kmt coding downstream 864780 27573552 ~ 27578060 (+)
c2h16orf89 cunh16orf89 coding downstream 882813 27591585 ~ 27603143 (+)
G13852 NA non-coding upstream 159542 26541513 ~ 26542017 (+)
G13848 NA non-coding upstream 171921 26526712 ~ 26529638 (+)
G13842 NA non-coding upstream 205138 26496219 ~ 26496421 (+)
G13838 NA non-coding upstream 216992 26483717 ~ 26484567 (+)
G13829 NA non-coding upstream 221669 26468757 ~ 26479890 (+)
G13899 NA non-coding downstream 60519 26769291 ~ 26848940 (+)
G13904 NA non-coding downstream 73124 26781896 ~ 26782551 (+)
G13908 NA non-coding downstream 110919 26819691 ~ 26823273 (+)
G14002 NA non-coding downstream 180918 26889690 ~ 26890092 (+)
G14016 NA non-coding downstream 220805 26929577 ~ 26931022 (+)
LOC103023549 gpr171 other upstream 906475 25788584 ~ 25795084 (+)
mfrp mfrp other upstream 1028323 25660898 ~ 25673236 (+)
LOC103045399 LOC108426937,LOC108277812 other upstream 1058816 25561633 ~ 25642743 (+)
LOC103040166 LOC103040166,LOC108426893 other upstream 1362124 25246996 ~ 25339435 (+)
G13445 spcs2,LOC107677086 other upstream 1645456 25052513 ~ 25056103 (+)
G14047 NA other downstream 300776 27009548 ~ 27040529 (+)
LOC103031366 LOC105899914 other downstream 1341357 28050129 ~ 28077818 (+)
rbfox1 rbfox1 other downstream 1403274 28112046 ~ 28607089 (+)
G14444 NA other downstream 2420295 29129067 ~ 29129373 (+)
G14480 NA other downstream 2686388 29395160 ~ 29398166 (+)

Expression


Co-expression Network