G14047


Basic Information

Item Value
gene id G14047
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 27009548 ~ 27040529 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18843
TGAAGGATAAAGcatcggtttttaattttggtttcTTCACAACCTTTAAACACAATGTGTGTAACATTATCATCACTATAAAATGTgagattctttttttattcaagaCAGTCATCAGAATGCCAATGTTAAGACAATGTGCCTGATTCGCTTTTATCAAAAGAGCTCGACAGAGCGGggaatgcacaaaaaaataatccaaagaAAAACTATTCGTCAAGcagatttatttaccaaataataaaaaaggacaaaagtgCCAGTTTCTGAATGTTAGATATGCTAAGCaacatttttgtaataaaaaaacaaaacaaaaaaaaaaacctactacTCTCCTGAGCCCACCTCTTCCTTCACCACCCcttagcttcagtgctaatgTCTCTTTAGCGCTCTGCGCGCTACAAAACTCCAGACTTGTGTCCAGTGGAATGACCAGAAATGAATTTGTTGACTAAACTCCAGATGCAAACTTAAACCACAGCCTGGAGGAAGATTTTTACCTCAGACTTTCAGGCCAGCGGCTGTGGTAGCTTAGCATAGCTGCGTTAGCCTTAGTTAACTGTGCTAGCCTTAGTTAGCTGTGTTGGTTTCCATTCTGACACTTTTGAAACTAAGAAAGCTAAACGCTAGCTTGTGGAATTGAGCAGAAGACACTCTTAAATGAAGATCTGTGTGAaccattatttatttctttattttctagaTTTATTTTCAAGCAAACAAAGCAGCCAGGCCTTGgttcagttatttatttttttatttgaagagTTCCTTCAATGACTAAACCAGCGAGCAGATGCACTTTCCCCTCATCCGATATCCCCGCTTTTCACTCCACTCCAAACTCCAGCCTCTTTTTAAaggaatatttaaacatttttcatcataatgtccatcagttcagttcaaccCGTCCCACAGAAAATAATTCTGACCCAGAAAACCCATGAAATCCAAATTTCACTTAATAGAAGTCGATAAGGCAGACGCTCAGGTTTTTTTACACAATAGTAACCATTCACAATGCACAAGTGCTGCCCATTACGCTTCTTTCTATGTTCTGATGGGAATCCACAGGTTTTCATCGTGTCAAAACAtggaaaatgttatatatattatcGTCCATGATAACCGACTCTATGCTACAGATTTAGCGGTCAGACGTTAATTTGAAAAATGAAGTATCCCTTTAAACCCGAAAATCTGACTCCACCCCCCACCCACTTAAGGTCAAAGATTCGCTACAAAAACTCACGTCCTGCTCATTCATTCGGCTTCCTTTCACCAGAAACAGTGTTCACCCATACGCAGGATATATCATCACGCCGCTACCGCAgagtacaaaaaagaaaaaacaaacaaacaaaagttaCCCAATGTGGGAATAATCGATCAATAGCACAAGCCTCGTCTTACAGCATGGACATGGTGATTCATGGGGGGGAGGGGGCGTGGCCAGAAAAGACAGGGGAACCCACAGAGGAGCTGGAGAGAAAGACCgacagagatagagatggagagagatagaggggtgGGTGTGTGGTGGGCACAGGGAGGGATGTTTGTGTGTCCGAGGGAAACAACCACGCAACATTTCAATGATTGAGAAACGGACACTTTAAAGAGTGGCGTCAAGGTCTTGTGATGTCAGGaggcaaacaaataaaaagttcaaccaaagaaaaaaaaaaaatcaagtgtcCAAATTTCAGAGTCTATTGTAGAAAAGGGAGAAGTGTTGCAGagagagagagagagagagagagagagagagagagagagagaaagagagagagaggctgggtTTAAGAAGTGTCTTGCTGAGGAGTTCTCACAGAGCCTGACTGCTCACACTGTTTAtgcactcactctctcgctcgctcactctctcgctcactctctcgctcactctctcgctcactctctcgctcactctctcgctcactctctctttgcTATTCTGGTATGCCCAGATTTGCCTCTATCGccccccacccctctctctctctttctctctctcaataacacacacaaaaactctcttagactccacacacacacacacacgttaacTCACAAACCCTGTcacccctctttctctctcactgtccaAATAGTTTGGACACAGTTAATTCAGGTCTCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18843 True 2151 TUCP 0.42 2 27009548 27040529

Neighbor

gene id symbol gene type direction distance location
pgam5 pgam5 coding upstream 44858 26959384 ~ 26964690 (+)
LOC103037665 NA coding upstream 300776 26701559 ~ 26708772 (+)
dscaml1 dscaml1,LOC107752281 coding upstream 334533 26497552 ~ 26675015 (+)
mindy4b fam188b2,LOC107598659 coding upstream 1180481 25816743 ~ 25829067 (+)
clrn1 clrn1 coding upstream 1201056 25801597 ~ 25808492 (+)
LOC107197223 NA coding downstream 19616 27060145 ~ 27103854 (+)
LOC111194302 NA coding downstream 63503 27104032 ~ 27112068 (+)
eef2kmt eef2kmt coding downstream 533023 27573552 ~ 27578060 (+)
c2h16orf89 cunh16orf89 coding downstream 551056 27591585 ~ 27603143 (+)
LOC103031039 gsg1l,LOC103031039,LOC108436662,LOC107690243,LOC107738642,LOC107685933 coding downstream 662685 27703214 ~ 27748186 (+)
G14033 NA non-coding upstream 498 26983987 ~ 27009050 (+)
G14013 ankle2,LOC102795364,LOC102797792 non-coding upstream 28415 26978601 ~ 26981133 (+)
G14012 NA non-coding upstream 36708 26971224 ~ 26972840 (+)
G14018 NA non-coding upstream 69402 26937907 ~ 26940146 (+)
G14016 NA non-coding upstream 78526 26929577 ~ 26931022 (+)
G14074 NA non-coding downstream 207764 27248293 ~ 27300283 (+)
G14080 NA non-coding downstream 404482 27445011 ~ 27445322 (+)
G14084 NA non-coding downstream 465386 27505915 ~ 27593437 (+)
G14089 NA non-coding downstream 525985 27566514 ~ 27619814 (+)
G14096 NA non-coding downstream 546406 27586935 ~ 27643122 (+)
LOC103023549 gpr171 other upstream 1214464 25788584 ~ 25795084 (+)
mfrp mfrp other upstream 1336312 25660898 ~ 25673236 (+)
LOC103045399 LOC108426937,LOC108277812 other upstream 1366805 25561633 ~ 25642743 (+)
LOC103040166 LOC103040166,LOC108426893 other upstream 1670113 25246996 ~ 25339435 (+)
G13445 spcs2,LOC107677086 other upstream 1953445 25052513 ~ 25056103 (+)
LOC103031366 LOC105899914 other downstream 1009600 28050129 ~ 28077818 (+)
rbfox1 rbfox1 other downstream 1071517 28112046 ~ 28607089 (+)
G14444 NA other downstream 2088538 29129067 ~ 29129373 (+)
G14480 NA other downstream 2354631 29395160 ~ 29398166 (+)
nubp1 nubp1,LOC107690260,LOC107685912 other downstream 2633581 29674110 ~ 29720592 (+)

Expression


Co-expression Network