G14096


Basic Information

Item Value
gene id G14096
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 27586935 ~ 27643122 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18898
attgattgtcaatcagtgttgcttcctaagtggacagtttaatttcacagaagtttgatttacttggagttatattgtgttatttgagtgttccctttatttttttgagcagtgtatataaacCGCATACCTGCAGGAAAATATAAGCCTGGTCCTCCAGCTTCAGTAAGACGTAAAGAAGCTGGATAGACTGGAAGACCACCTTGGAGGCATAGCGAAAGATTTTCGGTCCCACTAAAAGATAAAAAGCAGATGATAGAACAGAGAAACATCAGAAAGATGTTtgtgcaacataaaaataaacctgaGCCTGCATTACTGCGTTACCTTGAATGCCCTTAAGTTCTGAAATAGGAATGATGTCTATTCGGTCGTCTTCAAGAACATCTTGATGAGGTTTGGTACCTACAAGGGGAAAAACACCCGTCAGTTAATAATCTGATGATACACCAGCTTTACAAGGGTAGAAACCTTGCATAAAAATCTTGCATAAATATTTATCTATAAAGTATACAGATTAATAAAGCAGTGATGTGCATGCAATTTCTCTGCAGAAAGTAAATAAGGACAGTGCGGATTTGGAAATACTGAATGATGATAATTAGTTATGAAACATTAATAACTGTTGTCTTAATACTAACTAAttcaaaatgatagaaacaatTGAATGTGGATTTAAATGCCCAGATGTTTAAGTGAGAAATGTTTggatattttaagtaagtaaatataagtaaatatgtaatctgttgtatttGGGCACTTTAGGAAACAGAGCAAGCTGAGTGTGAACTGTGTAAATCAGCACATTACTCCTCTCTTATTTGGTTTCTGTCGCCCAGtattgctgttaaaaaaaaaggttggatTCGACAAACATAATTACAATTAACACTGTCAATTGTACAGTACCtatcaaaggtttggacacaccttctcattcagtctttatttaattgattttctaaattgtagagtaatattaaagacatagaACACTCATAAAGACACTGACCATAAAACACCAAGAGTGTGCatatctgtcctcaaagctaaatgtggtacttagaagaatctaaactagaaaacatactatgtttttttttgtttacacaaAGTTCctgcatgtgttcctttatagcaTTAACATAGtcttcaatatttaaaaaaaaatcataaaaataaggaaaaacacattgagaaaatgagaagaggtgtgtccaaacttttgactggtactatatatacacaactctaaaaaaaaaaagagagaccacttaaaaatgatgagtttctttaattttaccaaactgaaaacctctggaatataatcaagaggaagatggatgatcacaagccatcaaaccaccaaactgaactgcttgaatttttgcaccaggagtaaaaataacaaagttacccaaaagcagtgtgtaagactggtggaggaggacatgatgccaagatgcatgacaactgtgattaaaaaccaccagggttattccaccaaataatgatttctgaactcttaaaactttatgaatatgaacttgttttcattgcacTATaagctatatttttatttggagtttgggagaaatgttgtctgtaatttatagaataaaacaacaatgttcgttttactcaaacataaacctataaatagcaaaaccagagaaactgattcagaaactgaggtgctctcttaattttttttcagagctttatatgtatattgaattatataatgtatatatacttatatatattcttattcCAATTCTAACTTTAGCCTTGTTTATCACAAGCATTATTCTGCATTAGCATCTGTCTGGCAAGCCTGGTAATGCTGTgtctttttaatgtcttttgGCTCATAACTGCGGTCTTATGGTCTTAAGCTACCAATAAAGTGTCCTTTGCATTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18898 True 1928 lncRNA 0.25 2 27586935 27643122

Neighbor

gene id symbol gene type direction distance location
eef2kmt eef2kmt coding upstream 8875 27573552 ~ 27578060 (+)
LOC111194302 NA coding upstream 474867 27104032 ~ 27112068 (+)
LOC107197223 NA coding upstream 483081 27060145 ~ 27103854 (+)
pgam5 pgam5 coding upstream 622245 26959384 ~ 26964690 (+)
LOC103037665 NA coding upstream 878163 26701559 ~ 26708772 (+)
LOC103031039 gsg1l,LOC103031039,LOC108436662,LOC107690243,LOC107738642,LOC107685933 coding downstream 60092 27703214 ~ 27748186 (+)
fbxl16 fbxl16,LOC107685932,LOC107738613,LOC107568165,LOC107568127,LOC107690242 coding downstream 156294 27799416 ~ 27842056 (+)
mettl22 mettl22 coding downstream 1022090 28665212 ~ 28694928 (+)
abat abat,LOC107690246,LOC107738621,LOC107685926 coding downstream 1054300 28697422 ~ 28748984 (+)
dnase1 dnase1l2 coding downstream 1170996 28814118 ~ 28821841 (+)
G14080 NA non-coding upstream 141613 27445011 ~ 27445322 (+)
G14074 NA non-coding upstream 286652 27248293 ~ 27300283 (+)
G14033 NA non-coding upstream 577885 26983987 ~ 27009050 (+)
G14013 ankle2,LOC102795364,LOC102797792 non-coding upstream 605802 26978601 ~ 26981133 (+)
G14012 NA non-coding upstream 614095 26971224 ~ 26972840 (+)
G14172 NA non-coding downstream 36303 27679425 ~ 27679692 (+)
G14179 NA non-coding downstream 169840 27812962 ~ 27890032 (+)
G14198 NA non-coding downstream 361162 28004284 ~ 28094960 (+)
G14217 NA non-coding downstream 558039 28201161 ~ 28206645 (+)
G14245 NA non-coding downstream 836669 28479791 ~ 28480303 (+)
G14047 NA other upstream 546406 27009548 ~ 27040529 (+)
LOC103023549 gpr171 other upstream 1791851 25788584 ~ 25795084 (+)
mfrp mfrp other upstream 1913699 25660898 ~ 25673236 (+)
LOC103045399 LOC108426937,LOC108277812 other upstream 1944192 25561633 ~ 25642743 (+)
LOC103040166 LOC103040166,LOC108426893 other upstream 2247500 25246996 ~ 25339435 (+)
LOC103031366 LOC105899914 other downstream 407007 28050129 ~ 28077818 (+)
rbfox1 rbfox1 other downstream 468924 28112046 ~ 28607089 (+)
G14444 NA other downstream 1485945 29129067 ~ 29129373 (+)
G14480 NA other downstream 1752038 29395160 ~ 29398166 (+)
nubp1 nubp1,LOC107690260,LOC107685912 other downstream 2030988 29674110 ~ 29720592 (+)

Expression


Co-expression Network