G14018


Basic Information

Item Value
gene id G14018
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 26937907 ~ 26940146 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18811
CCTGGATGACAACTTAGTGCATTAGCAACACAAATCAGAGCCAACAAGAATTAAAAAGTCAACAGAATTTGGCTAATCACTGCAAAAAATCTAGTAAACGTTTAGTTTTACCTCAGAGTTACAAAACAttgaaagctaaagctaaaacccTTCAATTAGCATCCTGACCCCTCACTGCTAACCCTGTTTAACCTACTGTTAACCTGGAAAACCGACGACAGTAGAGACAAAATGCTAATTGGCTACATGCTAACTATTATTTTTAGCTATGCTAATGGCGTTTTTGTATAAGTAGAGCGGATCTAACAAGtcagtgtttttacacctgtgtAACAGATACAGGCAAGTAAAAAGGGGTTTCCTCCACAGTTTCCACTTCCCCGTTAGCACTTAGCTGCAGCGCTACAGTGTGCGGCAGTGTGGGGGTGGACTGTGTCTCTGCACGTAGGCCTGTGTTTGGGTTCTTTCCGTGCTTGTGGTGCCGAACGTGTGCATCAGTTGTCAGTATGCAAAGAtttaaaaagatgcaaagaTTGAGCTATGCTAACGCTACCGCAGTTTACgcaaacaaacagataaacaaaaccCAGCCTGCGCTGAATCATTCCGTGTCTACATTTCCCCAAAAACGAGCTGGAAATCCCGCTTATCCAGCGCTGGAACTCTGCAAATTTGCATACATAGTGTGTACTGTTCTTTGGTGTGTTTTCTAAATATTTACAAGCAGATGCTTCACAGGTTTCACATAAAATCAGCTGAACATTCAGTCTGCTGTAGAAATCATACATCAGAGAAATTAGCCTGATGTTACTCAGTCGTTCATGCTTACAGAGTTCTGAATCTTTCTATAGAAAATACCATTTGTGTGGCCTGAGCTTTTATATATACTAGTCTAGAGCATTTCAAAAATTCAGATCTATCTACCAGATGTTTCtatttgtaatgtaaagttataaATGATGcttttttatacatacatatacagctctggaaaaaattaaaagaccacttcagtttctgaatcagtttctctgattttgctatttataagtttatgtttCTCCcacattcaaaataaaaatattgtcatttatttgcagaaaatgagaaatggctgaaatgactgaaaaaagctgcagagctttcagatctcaaataatgcaaaaaaaaaaaaacaagttcatattcataaagttttaagagttcagaaatcaatatctggtaaaaaaaaaaataaccctggttttaaatcacagtttttttttgcatcttggcatcatgttctcctccaccagtcttacacactgcttttggataactttatcatTTCAATTCACCATtctttaagtgctctcttattttgttccagagctgtatctatatttaacagtgtaaacagtgttcattaaattatagttttaaaCAGACTCCTGTGTGAGTAGTCTCAGTGTTTTTGGTGGTTGACTCAAGAGTTTAGTGCAGGTTTGGCTCACAGTGATTCTCAGCAGGATCATTCAGACAGTGATTCAGtacatgaatgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgttagagtgacGATAAGTGTCCTGAGTAAACTGTATCCTTCAACAGCCCCATGAGTCTCTTATGTTCCAGGCAGTGAGTTAGCTTTAGCTGTTAGCGACATTagcaaaaatgtgtgtgtgtttatgtgcaaaAGTCTTAGACAACTAAGCAAACTAGACTTTGGATGGGAACTGGGAATatgctcggcacagcgcctgtgttaccgagatagtgatgaacgtctgactgttggcgtctgtctagattgtattcagtcagtggagctaaaactccagaaatgtacctgaacacacctcatttccagagcaccacgcccatcagtgcagatatattcagaagatctgctgctgtttaaaccaggcaatgagctatcttacacctcaggGTGCTGGGTATAAGACCTGATTTGGTGAATAAGACTTttccacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctcagaaGCGGGCGATCTCCCTCAGGGTGGGCGGGGCTCCGCGGGAGAGGTTGAGCTGGTGCAGTCCTGTATTAAAACTGGCGCAGAGTAAACTGCTGGAGTCACAAGGCGCCAATGATACCAACGGACCCGACCCGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18811 True 2177 lncRNA 0.40 3 26937907 26940146

Neighbor

gene id symbol gene type direction distance location
LOC103037665 NA coding upstream 229135 26701559 ~ 26708772 (+)
dscaml1 dscaml1,LOC107752281 coding upstream 262892 26497552 ~ 26675015 (+)
mindy4b fam188b2,LOC107598659 coding upstream 1108840 25816743 ~ 25829067 (+)
clrn1 clrn1 coding upstream 1129415 25801597 ~ 25808492 (+)
LOC103023233 NA coding upstream 1154860 25774795 ~ 25783047 (+)
pgam5 pgam5 coding downstream 19238 26959384 ~ 26964690 (+)
LOC107197223 NA coding downstream 119999 27060145 ~ 27103854 (+)
LOC111194302 NA coding downstream 163886 27104032 ~ 27112068 (+)
eef2kmt eef2kmt coding downstream 633406 27573552 ~ 27578060 (+)
c2h16orf89 cunh16orf89 coding downstream 651439 27591585 ~ 27603143 (+)
G14016 NA non-coding upstream 6885 26929577 ~ 26931022 (+)
G14002 NA non-coding upstream 47815 26889690 ~ 26890092 (+)
G13899 NA non-coding upstream 88967 26769291 ~ 26848940 (+)
G13908 NA non-coding upstream 114634 26819691 ~ 26823273 (+)
G13904 NA non-coding upstream 155356 26781896 ~ 26782551 (+)
G14012 NA non-coding downstream 31078 26971224 ~ 26972840 (+)
G14013 ankle2,LOC102795364,LOC102797792 non-coding downstream 38455 26978601 ~ 26981133 (+)
G14033 NA non-coding downstream 43841 26983987 ~ 27009050 (+)
G14074 NA non-coding downstream 308147 27248293 ~ 27300283 (+)
G14080 NA non-coding downstream 504865 27445011 ~ 27445322 (+)
LOC103023549 gpr171 other upstream 1142823 25788584 ~ 25795084 (+)
mfrp mfrp other upstream 1264671 25660898 ~ 25673236 (+)
LOC103045399 LOC108426937,LOC108277812 other upstream 1295164 25561633 ~ 25642743 (+)
LOC103040166 LOC103040166,LOC108426893 other upstream 1598472 25246996 ~ 25339435 (+)
G13445 spcs2,LOC107677086 other upstream 1881804 25052513 ~ 25056103 (+)
G14047 NA other downstream 69402 27009548 ~ 27040529 (+)
LOC103031366 LOC105899914 other downstream 1109983 28050129 ~ 28077818 (+)
rbfox1 rbfox1 other downstream 1171900 28112046 ~ 28607089 (+)
G14444 NA other downstream 2188921 29129067 ~ 29129373 (+)
G14480 NA other downstream 2455014 29395160 ~ 29398166 (+)

Expression


Co-expression Network