c2h16orf89 (cunh16orf89)


Basic Information

Item Value
gene id c2h16orf89
gene name cunh16orf89
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 27591585 ~ 27603143 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675797.1
ttgtataccaactcttgacaagttcatattaaatattacatataatattaaagttctttactttaatattaatctacaacacAAAGTGCCTATAAATCGTAGGGATTAGGGCATAGGGAGCATGAGTTAAGAATGGAACGCGCCCCCTCAAGGCTGTACACTAGCTTACACTCCCTCCCTGCCTCCCCTACGTTACTGATCCCCCCCGACTCATCACTGTATTCATCAGAACTAACCAACCACGTGATGAGTTTCTCACCTCGCGCTGTTCCTCCACACTTCTAAACTAAAGAGCAAAGTCTCCTTCTTTTACTGCAGCTTTAACTagttattctttcttttagattgtttttttaatgggagTGAAGAAGAGCATGTCTCCcagtctgctgctgctcctctttctctcctccctgATGAACTGTTCTCAGCAGGAGCTGATTGATGATCTGCTGGAGAGTTTATCTAAAGGAGTGTCCTTCTTCGAGAAGCAGAGCGGGAATATTAACCTGGATGGAGTTGTTGGTTATGTCATTCTGCAAGCGCAGTTGCTGGAAGCGACGAGGTCCTGGCCTCATTCAGACTTCGTGAGCCTCTCTCAGCGCTCCACAGCCATGTCCCTGATCAAAAAGCTGGACAGAAGCTTGACTCACGCCGTCAGGTCTCTGCAGCAGACAGACCCTAAATATTACAAAgAGTTTGAGCCCATCCTGGACACATCTTTCTGGGTTTTGCCTCAAGAATGGAGCAGCACCGACCCCTCCCTTGTGTACTCGTCACTCAAGTCCACAGAGTGTTATGATGAGCAGCTTGGAGACAAGTGCATGACACTACTGTTAGGAACCTGgAAAGACAATGGGACACCGTGCATCGTCACCAAGTCTTGCAGAGACACAATGACTCGTTTCGGATGCCCACATTACTCGCTGTCCCACCAGCTGCTGTACTTCATGATCGGGACCATGAAAGGATGCTCCTGGATGCTTAAAGGTGATATGAGGCTGTCTCGCATCAACATTACTGTGGAGCACTATCAGAGGATCTTCTGCTCCAACATGATGAAGAGCAATCTGGACAGCATCAGCAACGGCATCACTGGACAGATACAAGATATCTTCATAGAAAACATTCTACTGTGTGGTTTGGCTGGGTTCTCTGACTTCTATAAAGCAGACTGGTTACAGCACATTCTGCAGTGGCAAGACAGAGAACTGGGCTGCTTTGGAAAAGATGAGGACTACTCACAAATGTTTGAGGAATTTCTGGATACGCCCCACAAACGAGCAAAAAGAAGAGACAAGGCTATGAAAGAGCACTGCTCACAAATGTTTGAGGAATTTCTGGATATACCCCACAAGCGagtgaaaagaagagaaaagactTTAAAAGACGGCTGTTCGAGTCACATGACAGGTGTAGCCGTGAGCACGCTGGGGGGTTACCTCAACTTCTACCTGTCTGAGCAAGACATTACCAAGAGGCCGCTGACCTGAACTCTGGAAATCACAACAGAACATTGCATTCATTAAACACACTGGTTTTTATTctgtagaaaaataaactgtaatctgtacatttttaaatagcagTACAGTATCTAAGAATGATAactgagtatatatatatatatatatatttcataaatttaaccccagaaaaacagatacataAATGCTCATATGTTGTTCACATACAGTTGATGTTCAGTTTAAGCAGATTTGTGATGCTCAGAGAGTGTAACCCTCAGGGGCGATATGACCCAAAGGGCATTCTTAATAATGCATGGCTGACTACATTCCAGTAACAGCTTGGTGTCTCACTCTTCCTGGAAAGCAAGACCGTATTCCAGGAACTAAAGAAAATGTCTGAAGACTTTAAGATTCAGATTATAGATCCCTACAGTCCTGGAACGTTACATTGCACAttactgtactgttttttttccgcACCATAAATCATTTTAACCCTTTGGACAGCTTGTTAAATATAATTTGTTGGGTTAAAACAGCAACAGTACTGAAATGTGCACTGCAGAGGTGGAATTATCCAGCATTTTTTAACCTCATTTGTTAGCTGCCATTTAGCAAATGGTCCATTATTATAGACATTAAAACTTAAATGTGTTTGCAGTGAATCTACACTcaaaatctgtttaaatgttAACCACAACAGAAGCAAGGAAACTGACAATCCACAGTAATTATCTATAGTAGACTCACATTAGGTTAAAAACGCTggggcattattattattttttttacaagaagaTAGTTTGGTCGCTTTTAGAATGGACCTCAATGGCAGCCCGGCATTGTTGTGCCATTACTAGTGTTAGGGGAGtagtttggcaaaaaaaaaaaaaaaa

Function

NR:

description
PREDICTED: UPF0764 protein C16orf89 homolog isoform X1

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675797.1 True 2365 mRNA 0.42 9 27591585 27603143

Neighbor

gene id symbol gene type direction distance location
eef2kmt eef2kmt coding upstream 13525 27573552 ~ 27578060 (+)
LOC111194302 NA coding upstream 479517 27104032 ~ 27112068 (+)
LOC107197223 NA coding upstream 487731 27060145 ~ 27103854 (+)
pgam5 pgam5 coding upstream 626895 26959384 ~ 26964690 (+)
LOC103037665 NA coding upstream 882813 26701559 ~ 26708772 (+)
LOC103031039 gsg1l,LOC103031039,LOC108436662,LOC107690243,LOC107738642,LOC107685933 coding downstream 100071 27703214 ~ 27748186 (+)
fbxl16 fbxl16,LOC107685932,LOC107738613,LOC107568165,LOC107568127,LOC107690242 coding downstream 196273 27799416 ~ 27842056 (+)
mettl22 mettl22 coding downstream 1062069 28665212 ~ 28694928 (+)
abat abat,LOC107690246,LOC107738621,LOC107685926 coding downstream 1094279 28697422 ~ 28748984 (+)
dnase1 dnase1l2 coding downstream 1210975 28814118 ~ 28821841 (+)
G14080 NA non-coding upstream 146263 27445011 ~ 27445322 (+)
G14074 NA non-coding upstream 291302 27248293 ~ 27300283 (+)
G14033 NA non-coding upstream 582535 26983987 ~ 27009050 (+)
G14013 ankle2,LOC102795364,LOC102797792 non-coding upstream 610452 26978601 ~ 26981133 (+)
G14012 NA non-coding upstream 618745 26971224 ~ 26972840 (+)
G14172 NA non-coding downstream 76282 27679425 ~ 27679692 (+)
G14179 NA non-coding downstream 209819 27812962 ~ 27890032 (+)
G14198 NA non-coding downstream 401141 28004284 ~ 28094960 (+)
G14217 NA non-coding downstream 598018 28201161 ~ 28206645 (+)
G14245 NA non-coding downstream 876648 28479791 ~ 28480303 (+)
G14047 NA other upstream 551056 27009548 ~ 27040529 (+)
LOC103023549 gpr171 other upstream 1796501 25788584 ~ 25795084 (+)
mfrp mfrp other upstream 1918349 25660898 ~ 25673236 (+)
LOC103045399 LOC108426937,LOC108277812 other upstream 1948842 25561633 ~ 25642743 (+)
LOC103040166 LOC103040166,LOC108426893 other upstream 2252150 25246996 ~ 25339435 (+)
LOC103031366 LOC105899914 other downstream 446986 28050129 ~ 28077818 (+)
rbfox1 rbfox1 other downstream 508903 28112046 ~ 28607089 (+)
G14444 NA other downstream 1525924 29129067 ~ 29129373 (+)
G14480 NA other downstream 1792017 29395160 ~ 29398166 (+)
nubp1 nubp1,LOC107690260,LOC107685912 other downstream 2070967 29674110 ~ 29720592 (+)

Expression


Co-expression Network