Gene
RNA
| Item | Value |
|---|---|
| gene id | G13838 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 26483717 ~ 26484567 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU18584 | True | 851 | lncRNA | 0.38 | 1 | 26483717 | 26484567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mindy4b | fam188b2,LOC107598659 | coding | upstream | 654650 | 25816743 ~ 25829067 (+) |
| clrn1 | clrn1 | coding | upstream | 675225 | 25801597 ~ 25808492 (+) |
| LOC103023233 | NA | coding | upstream | 700670 | 25774795 ~ 25783047 (+) |
| LOC103022923 | LOC103022923,LOC108426899 | coding | upstream | 717932 | 25748629 ~ 25765785 (+) |
| LOC103031763 | NA | coding | upstream | 742054 | 25732877 ~ 25741663 (+) |
| dscaml1 | dscaml1,LOC107752281 | coding | downstream | 12985 | 26497552 ~ 26675015 (+) |
| LOC103037665 | NA | coding | downstream | 216992 | 26701559 ~ 26708772 (+) |
| pgam5 | pgam5 | coding | downstream | 474817 | 26959384 ~ 26964690 (+) |
| LOC107197223 | NA | coding | downstream | 575578 | 27060145 ~ 27103854 (+) |
| LOC111194302 | NA | coding | downstream | 619465 | 27104032 ~ 27112068 (+) |
| G13829 | NA | non-coding | upstream | 3827 | 26468757 ~ 26479890 (+) |
| G13828 | NA | non-coding | upstream | 15145 | 26457994 ~ 26468572 (+) |
| G13823 | NA | non-coding | upstream | 25961 | 26449521 ~ 26457756 (+) |
| G13822 | NA | non-coding | upstream | 34248 | 26449267 ~ 26449469 (+) |
| G13733 | nars2,LOC107670421,LOC107699825 | non-coding | upstream | 477038 | 26003646 ~ 26006679 (+) |
| G13842 | NA | non-coding | downstream | 11652 | 26496219 ~ 26496421 (+) |
| G13848 | NA | non-coding | downstream | 42145 | 26526712 ~ 26529638 (+) |
| G13852 | NA | non-coding | downstream | 56946 | 26541513 ~ 26542017 (+) |
| G13844 | NA | non-coding | downstream | 195236 | 26679803 ~ 26738117 (+) |
| G13899 | NA | non-coding | downstream | 284724 | 26769291 ~ 26848940 (+) |
| LOC103023549 | gpr171 | other | upstream | 688633 | 25788584 ~ 25795084 (+) |
| mfrp | mfrp | other | upstream | 810481 | 25660898 ~ 25673236 (+) |
| LOC103045399 | LOC108426937,LOC108277812 | other | upstream | 840974 | 25561633 ~ 25642743 (+) |
| LOC103040166 | LOC103040166,LOC108426893 | other | upstream | 1144282 | 25246996 ~ 25339435 (+) |
| G13445 | spcs2,LOC107677086 | other | upstream | 1427614 | 25052513 ~ 25056103 (+) |
| G14047 | NA | other | downstream | 524981 | 27009548 ~ 27040529 (+) |
| LOC103031366 | LOC105899914 | other | downstream | 1565562 | 28050129 ~ 28077818 (+) |
| rbfox1 | rbfox1 | other | downstream | 1627479 | 28112046 ~ 28607089 (+) |
| G14444 | NA | other | downstream | 2644500 | 29129067 ~ 29129373 (+) |
| G14480 | NA | other | downstream | 2910593 | 29395160 ~ 29398166 (+) |
