LOC103031763


Basic Information

Item Value
gene id LOC103031763
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 25732877 ~ 25741663 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675572.1
AACCAGACTGTATGaacagtaataattaatatgttaaaatattttttaaggacGAGTGTTTGATGGGGAATTTGCCTGGATGTGATGTCTGTGTCAGACCAATAGGTGGAAGGATGATGTTGGCAGTGCGTGACCGGTAAGCACTATGGTTCCTCATCCTGAGGTACTTATGGTACCTCTTCCTCTCAGCTGCTCACACAGTCCAGCAGAGAGGAATACCACAGCTGATCTTTTCTTCACCTCCCAACATACAGATCCTTCTATCCCTCCAGAACAGgttctCTGCAGAGTACAGATGTATTCCATCCCCTTTGCGAGGTGTCTGGGAATATCCATGATTCCTCTGGTAGTTCTGAGCACTATAGCcagtctgctgctgctttttccCAGCATGCAGCACCGCTACCTGGCTGAAGGTCACATAACCCCAGAGGCTCGGTCCTGCACGGGGATATGGCTCTCTGGATTTGTGGTGCTTGTGGCTGCTCGAGGCTTTGCATCACGCTATATGAAAGAAGGACACTGTCTATTCAGAGCtgatATGATGTGTCGGCTAGCGTACACGTGTGTGGCTGTGTTTGCTACTGGCATCTGTTTTCTGATTAATAATAGTGGACTAACCAAGGGACCTCTGTGTCTGTACAACGGAACCAATGGTCAAGAGTGGGGCAGACCTCTGCAACGTGAGAATACAGAAGAGATCAGTTATTTGTATGTGCCTGAGCGCTGGGCGTCTGCCTGTATTGAACCTCATGGCATTGTGATGTGGAACATGGTGCTCTTCTCTATGATCATGACGACTAGTGGACTCCAGGCTTTCATCTGCACTGTGCAGATCCTACACGCTATAGTGGCCGTGATTATGGGGCCTGGCTTTCGTAAGAACCAGGTGGTTCCTGCTTGAAGAAACTGGAGGAGAAGTTTGTTTCAGCAAAAGTTCAGTGTTAATTGTGTTTAAAGGGCTCGTGCTATTTATGACGATGCTTTAGTTCCTGCTTGAAGCATTTGATAGAGAGACGAAGATGAGACGAAGGCCTGTCTTGCTGCGCCAGGTTTGGTCACTAGTGCTTTATTTTGCACAAACTACTGTACTACATACTATTGCGATGAGTGAATTTCCAATAGGAGTGTACAGATTTGACATGTTTAATATGCTAGTTTTGGATGCAGAGAGATAAAGGTAGGATTTCTATATTTTTGAGTGAAATGCAATTTATGTAGCTTccaaaataaatcatatataagaatttaaatttttaatgtaGCCTGCACTGAACCACAAGTAAATACCCTAAGGCAACATTTCTTAATCCTGGACCTGGAGGTACCCTGCCTTGCCCATTTTAGTGGTTTACCTGCTTTCCCACACCCCCTGCAAATCTGAAAAGGCTTGTAAATGAGAAATATACATTTGGTAAAactggtaacacttcctatgaatcctgtattcttaatgcattataaattaatttataatgcataatatGGCATacataatactatataataatgTACATATAACCATCATAAACTTGTACAATAACTAATATCATACAGGAGAGAGACATAACCTTTTTAACttccaatggaagtcaatgtaaaaagaatttatttcagataatttagaagaatttctattggtcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675572.1 True 1645 mRNA 0.42 6 25732877 25741663

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 3208 25722719 ~ 25729669 (+)
LOC103022406 ano7 coding upstream 11210 25704994 ~ 25721667 (+)
LOC103021785 LOC103021785 coding upstream 34244 25693699 ~ 25698633 (+)
LOC103047847 LOC103047847,LOC108426896 coding upstream 41722 25689054 ~ 25691155 (+)
LOC103047330 NA coding upstream 46234 25680398 ~ 25686643 (+)
LOC103022923 LOC103022923,LOC108426899 coding downstream 6966 25748629 ~ 25765785 (+)
LOC103023233 NA coding downstream 33132 25774795 ~ 25783047 (+)
clrn1 clrn1 coding downstream 59934 25801597 ~ 25808492 (+)
mindy4b fam188b2,LOC107598659 coding downstream 75080 25816743 ~ 25829067 (+)
dscaml1 dscaml1,LOC107752281 coding downstream 755889 26497552 ~ 26675015 (+)
G13607 NA non-coding upstream 28927 25699497 ~ 25703950 (+)
G13589 NA non-coding upstream 88514 25644013 ~ 25644363 (+)
G13565 NA non-coding upstream 224428 25508205 ~ 25508449 (+)
G13545 NA non-coding upstream 329759 25401020 ~ 25403118 (+)
G13520 NA non-coding upstream 434650 25294469 ~ 25298227 (+)
LOC111194239 NA non-coding downstream 166078 25907741 ~ 25908666 (+)
G13733 nars2,LOC107670421,LOC107699825 non-coding downstream 261983 26003646 ~ 26006679 (+)
G13822 NA non-coding downstream 707604 26449267 ~ 26449469 (+)
G13823 NA non-coding downstream 707858 26449521 ~ 26457756 (+)
G13828 NA non-coding downstream 716331 26457994 ~ 26468572 (+)
mfrp mfrp other upstream 59641 25660898 ~ 25673236 (+)
LOC103045399 LOC108426937,LOC108277812 other upstream 90134 25561633 ~ 25642743 (+)
LOC103040166 LOC103040166,LOC108426893 other upstream 393442 25246996 ~ 25339435 (+)
G13445 spcs2,LOC107677086 other upstream 676774 25052513 ~ 25056103 (+)
G13237 NA other upstream 875855 24855933 ~ 24857022 (+)
LOC103023549 gpr171 other downstream 46921 25788584 ~ 25795084 (+)
G14047 NA other downstream 1267885 27009548 ~ 27040529 (+)
LOC103031366 LOC105899914 other downstream 2308466 28050129 ~ 28077818 (+)
rbfox1 rbfox1 other downstream 2370383 28112046 ~ 28607089 (+)
G14444 NA other downstream 3387404 29129067 ~ 29129373 (+)

Expression


Co-expression Network