G204235


Basic Information

Item Value
gene id G204235
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 9163643 ~ 9163965 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU277067
ctttctccatctctgggctccctaacctctctcctctaactgttttcctcaactcatcttctccaactccttctcTTCAactccaaactgaactgaactgcaaaCTCCTCCAACTGGCAACTCTAAACTGTGTCTGCCCAGTTTACTATTAgactctgtggcctgtttggccctTGAGCTCCGATTGGCTCTGTGGCCcaagtgtctgtgttttgattggtctaggagcaatttcaaactttggtggggattcacaaagggccataaaaccccccctcgctcacatggtcagcatgcttcagaatttttctaatagatcaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277067 True 323 lncRNA 0.47 1 9163643 9163965

Neighbor

gene id symbol gene type direction distance location
gabra4 gabra4,zgc:110204,LOC107716030,LOC107589116 coding downstream 88248 9026626 ~ 9075395 (-)
LOC103033058 gabra2,LOC108431103,LOC108268623,LOC107716031,LOC106611612,LOC107710477 coding downstream 169187 8905523 ~ 8994456 (-)
guf1 guf1 coding downstream 315465 8840463 ~ 8848178 (-)
LOC103033398 LOC108431116 coding downstream 374940 8768529 ~ 8788703 (-)
cenpu NA coding downstream 416571 8737654 ~ 8747072 (-)
pcgf1 pcgf1,LOC107589114,LOC107678659,LOC107705480,LOC107660820,LOC107710472 coding upstream 428058 9592023 ~ 9603124 (-)
LOC103046764 fgf24,LOC103046764,LOC108431102,LOC107678645,LOC107660805,LOC108268415,LOC107559274,LOC107710462 coding upstream 517467 9681432 ~ 9699163 (-)
tlx2 tlx2,LOC107705478,LOC107589150 coding upstream 605722 9769687 ~ 9787999 (-)
LOC103032746 LOC108416976 coding upstream 706285 9870250 ~ 9878549 (-)
loxl3 loxl3,loxl3a,LOC107758510,LOC107589109 coding upstream 744252 9908217 ~ 9948824 (-)
G204227 ap1ar,LOC106611615,LOC106604579,LOC107678622 non-coding downstream 19826 9138533 ~ 9143817 (-)
G204222 NA non-coding downstream 58563 9104868 ~ 9105080 (-)
G204219 NA non-coding downstream 96522 9060218 ~ 9067121 (-)
G204221 NA non-coding downstream 96950 9065609 ~ 9066693 (-)
G204217 NA non-coding downstream 113832 9018906 ~ 9049811 (-)
G204239 NA non-coding upstream 17999 9181964 ~ 9182270 (-)
G204240 NA non-coding upstream 50942 9214907 ~ 9215263 (-)
G204242 NA non-coding upstream 72486 9236451 ~ 9236671 (-)
G204243 NA non-coding upstream 98298 9262263 ~ 9277665 (-)
LOC111195839 NA non-coding upstream 420053 9584018 ~ 9585591 (-)
LOC107197584 tenm2,LOC108268421,LOC108431098,LOC107752041,LOC107561160,LOC107670182 other downstream 1420071 7456739 ~ 7743572 (-)
map1lc3b NA other downstream 2371652 6614604 ~ 6791991 (-)
jph3 jph3,LOC100148063,LOC107714052,LOC107654149,LOC107581833 other downstream 2489715 6594378 ~ 6673928 (-)
trnai-uau_43 NA other downstream 2631114 6532437 ~ 6532529 (-)
trnai-uau_42 NA other downstream 2631975 6531576 ~ 6531668 (-)
LOC103046444 LOC108431107 other upstream 559437 9723402 ~ 9759067 (-)
G204584 NA other upstream 1480289 10644254 ~ 10644687 (-)
G204671 NA other upstream 2419235 11583200 ~ 11584074 (-)
LOC111195729 NA other upstream 4569748 13733713 ~ 13739921 (-)
G205375 NA other upstream 4580388 13744353 ~ 13777621 (-)

Expression


Co-expression Network